BAC Information

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BAC

Clone NameB6Ng01-198N21
Chromosome1 (Build37)
Map Location 59,754,956 - 59,756,043
singlet/doubletsinglet
Overlap geneNol5
Upstream geneCflar, LOC100042431, Casp8, EG667419, Trak2, Als2cr2, 4930408G06Rik, EG667447, Als2cr11, Als2cr4, Mpp4, Als2, Als2cr7, Fzd7, Gm973, Sumo1, LOC100042476
Downstream geneB430105G09Rik, LOC100043007, Bmpr2, Als2cr13, LOC100042496, Ica1l, Wdr12, Carf, Nbeal1, Cyp20a1, Abi2, Raph1, LOC100043027, LOC100042533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198N21.bB6Ng01-198N21.g
ACCGA020351GA020352
length1,1771,097
definitionB6Ng01-198N21.b B6Ng01-198N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccaaacttacctgcttattcagtgcaaaccctatcaaacagta
gttgcctttttggtaacaactagtaactggcttttaaactttatactgat
attcaaagcacctagaacagctaaaataatatgaccaaaagattaaaaaa
aaatgatttctctatcctgatttcaaatcctacttcaaatcaccaaataa
gaacagtgtcgtattgtcatgaagaaaaatacacacatctgtggaacaga
agttggccattcagataaaagtagtaaattaattaacagattttctaatt
tgagacaaggtctcactgtgtgccccaggctggccttgaatttgtgatag
tcattccttggcctccgaagcagtgagtaagaggcatgtagcaccatctc
cagtttgataaacttatttataagacgatgccaagacaatttaataagga
aaaaaaaactaacctttctaacaaacagtgttgcaactggataaccacat
ggaaaacaatcaagttgatacctcctagtttcaagttattaacaaaaatt
aactaaaatagctcaaagattgttaaattctatataatcctcagggaaaa
aaagcataggcccagcacatctttgcaagcatggattatgaaacactatt
ctaaccactgaaggaaagacataacacagaaggtagaatggaaaatctgt
gctttgctgggcagtaatggtgcatgcctttaatccctgcacttgggagg
cagaggcaggaggatctctttgagtttgaggcgagtctggtcttcagagc
aagttccaggacagccaggctacacagagttttgaaaatacaaaaaaaaa
aaaaaaaattgctttatcaaaatctgtaattcccatgcttcaaagtataa
ataaaggtggctgacagaatgcagagggtcctattgggggtgtccatcat
ataaaaagaactaacacttaaaatatacagaccagcaatttactccttag
gaatatacccaataaaaacttgcacatagtcattatacatattattcata
ttactgaaagtgaaacatcagtatctatcaggtatgatatttaaatgact
aaaataaacgaggaatcaggaatgctcacagtgcaatgcttgcctgcgaa
gcataaggacctggctctcaaaactct
gaattctttttggtttttcaagacggggtttgaccaggctggactcaaac
tcagaaatccgcctgcctctgcctcccaagtgctgggatcaaaggtgtgt
gccacctctgcctggctacattggtgaattcttaaaagacaatatctgaa
aacccacaacggtgaattttcaagaaaacttatttttcatttaatgtgaa
tgtttttataggaaaaattgaatctcagctgtatccatagtcctgttgtt
aatgaacttatgagaggaatccgatcacaaatggatggcttgattcctgg
ggtagaaccacgtgagatggcagccatgtgtcttggattggcccacaggt
aagtacagaagttaaatgtatgcttactcatatacatacacatatttata
tacatctgtcctaaaagtgtgtaagtattaatgtcagggagatgctgctg
ttgccctcaagaaaaaacttgctcagcatcaataaagctgataagtggta
aaaatacaattattagacccagtgtattctttttggtttttccaggcagg
atttgtctgtatagctctggctgtcctggaactcggtctatagaccaggc
tggtcttgaattcaaagatccaactgcctctgcttccgaggtgctgggat
taaaagagtgtgccaccccaacctggctattgcctatattcttttaaaaa
tgaaaacttatggcaggctttctttatatcttcagtgttggatcatttct
tcccatagctttgctttggtctgagaaagaactttgctgtgtacacgtgt
ttctgattgggccagaaaaggctgtcaggtgtcccttcattcttcctatt
cctttgaggcagactctccccctggtttccggggctaggccagaaatcct
caaacctcattgatccttctgcctcccagctgaggtttgtttaggcacac
atggaattgctgacttgtatgtaggtacagggaatcagacttccacagct
catgattgtatagccagttacactttaactgctggagccatcttgtaatt
tattcagcgagcattaacatgctaggaatttgttgaaaggtagtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_59754956_59756043
seq2: B6Ng01-198N21.g_64_1160

seq1  GAATTCTTTTTGGTTTTTCAAGACGGGGTTTGACCAGGCTGGACTCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGGTTTTTCAAGACGGGGTTTGACCAGGCTGGACTCAAAC  50

seq1  TCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGTGTGT  100

seq1  GCCACCTCTGCCTGGCTACATTGGTGAATTCTTAAAAGACAATATCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCTGCCTGGCTACATTGGTGAATTCTTAAAAGACAATATCTGAA  150

seq1  AACCCACAACGGTGAATTTTCAAGAAAACTTATTTTTCATTTAATGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACAACGGTGAATTTTCAAGAAAACTTATTTTTCATTTAATGTGAA  200

seq1  TGTTTTTATAGGAAAAATTGAATCTCAGCTGTATCCATAGTCCTGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATAGGAAAAATTGAATCTCAGCTGTATCCATAGTCCTGTTGTT  250

seq1  AATGAACTTATGAGAGGAATCCGATCACAAATGGATGGCTTGATTCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTTATGAGAGGAATCCGATCACAAATGGATGGCTTGATTCCTGG  300

seq1  GGTAGAACCACGTGAGATGGCAGCCATGTGTCTTGGATTGGCCCACAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAACCACGTGAGATGGCAGCCATGTGTCTTGGATTGGCCCACAGGT  350

seq1  AAGTACAGAAGTTAAATGTATGCTTACTCATATACATACACATATTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAGAAGTTAAATGTATGCTTACTCATATACATACACATATTTATA  400

seq1  TACATCTGTCCTAAAAGTGTGTAAGTATTAATGTCAGGGAGATGCTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTGTCCTAAAAGTGTGTAAGTATTAATGTCAGGGAGATGCTGCTG  450

seq1  TTGCCCTCAAGAAAAAACTTGCTCAGCATCAATAAAGCTGATAAGTGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTCAAGAAAAAACTTGCTCAGCATCAATAAAGCTGATAAGTGGTA  500

seq1  AAAATACAATTATTAGACCCAGTGTATTCTTTTTGGTTTTTCCAGGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAATTATTAGACCCAGTGTATTCTTTTTGGTTTTTCCAGGCAGG  550

seq1  ATTTGTCTGTATAGCTCTGGCTGTCCTGGAACTCGGTCTATAGACCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTGTATAGCTCTGGCTGTCCTGGAACTCGGTCTATAGACCAGGC  600

seq1  TGGTCTTGAATTCAAAGATCCAACTGCCTCTGCTTCCGAGGTGCTGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGAATTCAAAGATCCAACTGCCTCTGCTTCCGAGGTGCTGGGAT  650

seq1  TAAAAGAGTGTGCCACCCCAACCTGGCTATTGCCTATATTCTTTTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGTGTGCCACCCCAACCTGGCTATTGCCTATATTCTTTTAAAAA  700

seq1  TGAAAACTTATGGCAGGCTTTCTTTATATCTTCAGTGTTGGATCATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTTATGGCAGGCTTTCTTTATATCTTCAGTGTTGGATCATTTCT  750

seq1  TCCCATAGCTTTGCTTTGGTCTGAGAAAGAACTTTGCTGTGTACACGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAGCTTTGCTTTGGTCTGAGAAAGAACTTTGCTGTGTACACGTGT  800

seq1  TTCTGATTGGGCCAGAAAAGGCTGTCAGGTGTCCCTTCATTCTTCCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTGGGCCAGAAAAGGCTGTCAGGTGTCCCTTCATTCTTCCTATT  850

seq1  CCTTTGAGGCAGACTCTCCCCCTGGTTTCCGGGGCTAGGCCAGAAATCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGGCAGACTCTCCCCCTGGTTTCCGGGGCTAGGCCAGAAATCCT  900

seq1  CAAACCTCATTGATCCTTCTGCCTCCCAGCTGAGGTTTGTTTAGGCACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTCATTGATCCTTCTGCCTCCCAGCTGAGGTTTGTTTAGGCACAC  950

seq1  ATGGAATTGCTGACTTGTTATGTAGGTACAGGG-ATCAGACTTCCACAGC  999
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  ATGGAATTGCTGACTTG-TATGTAGGTACAGGGAATCAGACTTCCACAGC  999

seq1  TCATGATTGTATAGCCAG-TACAC-TTAACTGCT-GAGCCATC-TGTA--  1043
      |||||||||||||||||| ||||| ||||||||| |||||||| ||||  
seq2  TCATGATTGTATAGCCAGTTACACTTTAACTGCTGGAGCCATCTTGTAAT  1049

seq1  TTATTCAGCGAGCCATAACATGCTAGGA--TTGTTGAAA-GTAGTATC  1088
      |||||||||||||  |||||||||||||  ||||||||| ||||||||
seq2  TTATTCAGCGAGCATTAACATGCTAGGAATTTGTTGAAAGGTAGTATC  1097