BAC Information

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BAC

Clone NameB6Ng01-199F09
Chromosome1 (Build37)
Map Location 81,595,297 - 81,596,124
singlet/doubletsinglet
Overlap geneEG621020
Upstream geneDock10, LOC665092, 9430031J16Rik
Downstream geneLOC433328, EG665145, Irs1, Rhbdd1, Col4a4, Col4a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199F09.bB6Ng01-199F09.g
ACCGA020694GA020695
length835708
definitionB6Ng01-199F09.b B6Ng01-199F09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaggttaggtttctatgtactctagaagaatccttctacttag
taagaactgagccttagttaggacccgctgtcatcttaggacatttttag
cagtgctgccaggtttggagctcattttgtgccataacaatttagttctc
tttttgctgttgacttcaggtcatgggagaggagtgagtagatctgtcct
tctgatgctcagtgctgattattgatttagaagtctaggttactctaatt
cacaggtagcttaatcattaagggttttgtgagatgtgcatgattgttgg
ttgacatgggtcccagctgggagtagatgtggaaagatagcctggggtaa
tagttgtagaagaagaggtcatgatcttgaaagagagtggacaaggggtg
ttggttattcgaaaaggaaagtagaaatgatgaaaattaagtactcatta
tgaaatcctcaaaacaaatttaagatttttaaaaaaaactcttgatgaat
acttatttcatatcactaggttttgtactttcagggaagaggaacatctt
gaaacaaattaacagatatcttgggttcatttcatggaatcttggtctcc
agtgctgtaatgatgtaggtgggaagagctctaaggggcgtggtctggag
agagtaattaagactgatacaaattcctgcttgactctggaacagttagc
tcctggaatattcttagagttcagatcatttctctgctaaagtagacaca
atgtagtgtctttcaatggttcacacaaatgttaggtaggaaaattaaaa
gcacagagatcaaaaagcattagttgaaacaaaat

gaattcatgaaattcctaggcaaatggatggacctggagggcatcatcct
gagtgaggtaacacattcacaaaggaactcacacaatatgtactcactga
taagtggatattagccccaaacctaggattcccaagatataaggtacaat
ttgctaaacacatgaaactcaagaagaatgaagactgaagtgtggacact
atgcccctccttagaattgggaacaaaacacccatggaaggagttacaga
gacaaagtttggagctgagatgaaaggatggaccaggtagagactgccat
atccagggatccaccccataatcagcatccaaacgctgacaccattgcat
accctagcaagattttatcgaaaggacccagatgtagctatctcttgtga
gactgtgccggggcctagcaaacacagaagtggatgctcacagtcagcta
atggatggatcacagggctcccaatggaggagctagagaaagaacccaag
gagctaaagggatctgcaaccctataggtggaacaacattatgaactaaa
cagtacccctgagctcttgactctagctgcatatgtatcaaaagatggcc
tagtcggccatcactggaaagagaggcccattggacacgcaaactttgta
tgccccagtacaggggaacgccagggccaaaaagggggagtgggtgggta
gggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81595297_81596124
seq2: B6Ng01-199F09.b_48_882 (reverse)

seq1  ATTTTGTTTCAACT-ATGCTTTTTGATCTCTGTGCTTTT-ATTTTCCTAC  48
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  ATTTTGTTTCAACTAATGCTTTTTGATCTCTGTGCTTTTAATTTTCCTAC  50

seq1  CTAACATTTGTGTG-ACCATTG-AAGACACTACATTGTGTCTACTTTAGC  96
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  CTAACATTTGTGTGAACCATTGAAAGACACTACATTGTGTCTACTTTAGC  100

seq1  AGAG-AATGATCTGAACTCT-AGAATATTCCAGGAGCT-ACTGTTCCAGA  143
      |||| ||||||||||||||| ||||||||||||||||| |||||||||||
seq2  AGAGAAATGATCTGAACTCTAAGAATATTCCAGGAGCTAACTGTTCCAGA  150

seq1  GTCAAGCAGGAATTTGTATCAGTCTTAATTACTCTCTCCAGACCACGCCC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCAGGAATTTGTATCAGTCTTAATTACTCTCTCCAGACCACGCCC  200

seq1  CTTAGAGCTCTTCCCACCTACATCATTACAGCACTGGAGACCAAGATTCC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGCTCTTCCCACCTACATCATTACAGCACTGGAGACCAAGATTCC  250

seq1  ATGAAATGAACCCAAGATATCTGTTAATTTGTTTCAAGATGTTCCTCTTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGAACCCAAGATATCTGTTAATTTGTTTCAAGATGTTCCTCTTC  300

seq1  CCTGAAAGTACAAAACCTAGTGATATGAAATAAGTATTCATCAAGAGTTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAGTACAAAACCTAGTGATATGAAATAAGTATTCATCAAGAGTTT  350

seq1  TTTTTAAAAATCTTAAATTTGTTTTGAGGATTTCATAATGAGTACTTAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAATCTTAAATTTGTTTTGAGGATTTCATAATGAGTACTTAAT  400

seq1  TTTCATCATTTCTACTTTCCTTTTCGAATAACCAACACCCCTTGTCCACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCATTTCTACTTTCCTTTTCGAATAACCAACACCCCTTGTCCACT  450

seq1  CTCTTTCAAGATCATGACCTCTTCTTCTACAACTATTACCCCAGGCTATC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCAAGATCATGACCTCTTCTTCTACAACTATTACCCCAGGCTATC  500

seq1  TTTCCACATCTACTCCCAGCTGGGACCCATGTCAACCAACAATCATGCAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACATCTACTCCCAGCTGGGACCCATGTCAACCAACAATCATGCAC  550

seq1  ATCTCACAAAACCCTTAATGATTAAGCTACCTGTGAATTAGAGTAACCTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAAACCCTTAATGATTAAGCTACCTGTGAATTAGAGTAACCTA  600

seq1  GACTTCTAAATCAATAATCAGCACTGAGCATCAGAAGGACAGATCTACTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAAATCAATAATCAGCACTGAGCATCAGAAGGACAGATCTACTC  650

seq1  ACTCCTCTCCCATGACCTGAAGTCAACAGCAAAAAGAGAACTAAATTGTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTCCCATGACCTGAAGTCAACAGCAAAAAGAGAACTAAATTGTT  700

seq1  ATGGCACAAAATGAGCTCCAAACCTGGCAGCACTGCTAAAAATGTCCTAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACAAAATGAGCTCCAAACCTGGCAGCACTGCTAAAAATGTCCTAA  750

seq1  GATGACAGCGGGTCCTAACTAAGGCTCAGTTCTTACTAAGTAGAAGGATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAGCGGGTCCTAACTAAGGCTCAGTTCTTACTAAGTAGAAGGATT  800

seq1  CTTCTAGAGTACATAGAAACCTAACCTCAGAATTC  828
      |||||||||||||||||||||||||||||||||||
seq2  CTTCTAGAGTACATAGAAACCTAACCTCAGAATTC  835


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