BAC Information

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BAC

Clone NameB6Ng01-200K18
Chromosome1 (Build37)
Map Location 73,840,126 - 73,841,134
singlet/doubletsinglet
Overlap genenone
Upstream geneIgfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208, LOC100043291
Downstream geneTns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1, Usp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200K18.bB6Ng01-200K18.g
ACCGA021668GA021669
length1,0111,053
definitionB6Ng01-200K18.b B6Ng01-200K18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggagacattgcggcctagtagaacttactctgcccaaagcag
atatgaaggcagccaaaccaagcagagattgttagctgagttatcctgct
ttctagaatagtccgaatgttttttttccatgcttctaattgcatgttct
gactaatcatataagctcacttcctccttttgaaagagggtggaagggtc
cctcataaacagaacagcccaccaaaatcccttacataaaaataattcat
agcttgggaagatatgcagaattcctctggctctgtggtccataacctgc
aaaatgtctgtggacctaatcttaaacttccttctttttccatattttga
gagataagtcccctaaatctcttttaatactcccagctgtggtcaatgcg
ctccagagctctcaaagccccaaacctactgatgtgggcaatgaaccctc
cagttctctgcttccgccatgagaggggggatctggctccaaaagcaaag
caacaaatgcatattcctacccggaggttgtggggaacaggctccctata
caaccaggctgagcagtgtatatgtgaaaccctggctattctcacagaga
accgtctcatcccacagacaaccttgccatataataacagccaaatggaa
atctaaacttctggaacaagatgttcccaccatgtgaccacatccattca
aagaagaacagggggtgtctgcatgaggagggaagtgagggggaaatttt
gctactcttacttcctggaaacaccaaggctcactttgtcctcatcttag
taagggaactgaaagctgtaaatatgtcagtcccttgaacaaagaaggta
taaaaggcacattccattcccagatcaaattaaaccaattactcccaggg
gatctggctcttactaacagcatggctaccttgcataagtgaggaattta
ttccatggtaagactctctttccaaatgcccagccctactcttaatcact
ttttagtttcc
gaattctttgaaggtctgatagaactctgcactaaactcatcttgtcctg
ggatttttttttggttgggagactattgatgattgcttctatttcttaag
gggaaatgggactgtttagatcattaatctgatcctgatttaactttggt
acctggtaactgcctaggaagttgtgcatttcatccaggttttccatttt
tgttgagtatagccttttgtagtaggatctgatgatgttttggatttcct
caggttctgttgttatgtttcctttttcatttctgattttgttaattaga
atactgtccctgtgccctctagttagtctggctaagggtttatctatctt
gctgattttctcaaagaaccagctcgtggtttggttgattctttgaatag
ttttgtttccacttggttgatttcagccctgagtttgattatttcctgcc
atctactcctcttggatgaatttgcttcctttagttttagagcttctagg
tgtgctgtcaggctactagtgtatgctctctctagtttctttttcgaggc
actcagggctatgagttctcctcttagtactgctttcactgtgtcccata
agtttgggcatgttgtggcttcattttcattaaactctaaaaagttttta
atttctttctttatttcatccttgaccaaggtatcattgagtagagtgtt
gttcagtttccacgtgaatgttggctttctattatttatgctgtttttga
aagatcagctttagcccgtgatgatctgataggacgcatgggataatttc
aatatttttgtatctgttgaggcctgttttgtgacccgattattatatgg
tccaattttgggaggaggtacttatgtggtgctgagaagaaaggtattat
cctttttgttttacgaatgaaatgttctgtagataatctatttagatccc
atttgtttcataacttctggttagtgtcatggtggtgctgggttagtttt
ctggtttccaggattctcctccatttggtggagagtgtgggggtggttgg
agt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73840126_73841134
seq2: B6Ng01-200K18.b_49_1059

seq1  GAATTCCAGGAGACATTGCGGCCTAGTAGAACTTACTCTGCCCAAAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAGACATTGCGGCCTAGTAGAACTTACTCTGCCCAAAGCAG  50

seq1  ATATGAAGGCAGCCAAACCAAGCAGAGATTGTTAGCTGAGTTATCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGGCAGCCAAACCAAGCAGAGATTGTTAGCTGAGTTATCCTGCT  100

seq1  TTCTAGAATAGTCCGAATGTTTTTTTTCCATGCTTCTAATTGCATGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAATAGTCCGAATGTTTTTTTTCCATGCTTCTAATTGCATGTTCT  150

seq1  GACTAATCATATAAGCTCACTTCCTCCTTTTGAAAGAGGGTGGAAGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATCATATAAGCTCACTTCCTCCTTTTGAAAGAGGGTGGAAGGGTC  200

seq1  CCTCATAAACAGAACAGCCCACCAAAATCCCTTACATAAAAATAATTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAACAGAACAGCCCACCAAAATCCCTTACATAAAAATAATTCAT  250

seq1  AGCTTGGGAAGATATGCAGAATTCCTCTGGCTCTGTGGTCCATAACCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGGAAGATATGCAGAATTCCTCTGGCTCTGTGGTCCATAACCTGC  300

seq1  AAAATGTCTGTGGACCTAATCTTAAACTTCCTTCTTTTTCCATATTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCTGTGGACCTAATCTTAAACTTCCTTCTTTTTCCATATTTTGA  350

seq1  GAGATAAGTCCCCTAAATCTCTTTTAATACTCCCAGCTGTGGTCAATGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAGTCCCCTAAATCTCTTTTAATACTCCCAGCTGTGGTCAATGCG  400

seq1  CTCCAGAGCTCTCAAAGCCCCAAACCTACTGATGTGGGCAATGAACCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGCTCTCAAAGCCCCAAACCTACTGATGTGGGCAATGAACCCTC  450

seq1  CAGTTCTCTGCTTCCGCCATGAGAGGGGGGATCTGGCTCCAAAAGCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCTGCTTCCGCCATGAGAGGGGGGATCTGGCTCCAAAAGCAAAG  500

seq1  CAACAAATGCATATTCCTACCCGGAGGTTGTGGGGAACAGGCTCCCTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATGCATATTCCTACCCGGAGGTTGTGGGGAACAGGCTCCCTATA  550

seq1  CAACCAGGCTGAGCAGTGTATATGTGAAACCCTGGCTATTCTCACAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGCTGAGCAGTGTATATGTGAAACCCTGGCTATTCTCACAGAGA  600

seq1  ACCGTCTCATCCCACAGACAACCTTGCCATATAATAACAGCCAAATGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCTCATCCCACAGACAACCTTGCCATATAATAACAGCCAAATGGAA  650

seq1  ATCTAAACTTCTGGAACAAGATGTTCCCACCATGTGACCACATCCATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAACTTCTGGAACAAGATGTTCCCACCATGTGACCACATCCATTCA  700

seq1  AAGAAGAACAGGGGGTGTCTGCATGAGGAGGGAAGTGAGGGGGAAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACAGGGGGTGTCTGCATGAGGAGGGAAGTGAGGGGGAAATTTT  750

seq1  GCTACTCTTACTTCCTGGAAACACCAAGGCTCACTTTGTCCTCATCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCTTACTTCCTGGAAACACCAAGGCTCACTTTGTCCTCATCTTAG  800

seq1  TAAGGGAACTGAAAGCTGTAAATATGTCAGTCCCTTGAACAAAG-AGGTA  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAGGGAACTGAAAGCTGTAAATATGTCAGTCCCTTGAACAAAGAAGGTA  850

seq1  TAAAAGGCACATTCCATTCCCAGATCAAATTAAACAATTTACT-CCAAGT  898
      ||||||||||||||||||||||||||||||||||| | ||||| ||| | 
seq2  TAAAAGGCACATTCCATTCCCAGATCAAATTAAACCAATTACTCCCAGGG  900

seq1  GACCT-GCTCTTACTAACAGCATGGCTTACCTTGCATTAAGTGAGGAATT  947
      || || |||||||||||||||||||| ||||||||| |||||||||||||
seq2  GATCTGGCTCTTACTAACAGCATGGC-TACCTTGCA-TAAGTGAGGAATT  948

seq1  TATTCCATGGGAAGACTCTC-TTCCAAATGCCCAGCCCCTACTCTTAATC  996
      |||||||||| ||||||||| |||||||||||||| ||||||||||||||
seq2  TATTCCATGGTAAGACTCTCTTTCCAAATGCCCAG-CCCTACTCTTAATC  997

seq1  AC-TTTTAGTTTCC  1009
      || |||||||||||
seq2  ACTTTTTAGTTTCC  1011