BAC Information

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BAC

Clone NameB6Ng01-202L03
Chromosome1 (Build37)
Map Location 139,373,660 - 139,374,750
singlet/doubletsinglet
Overlap genenone
Upstream geneKif14, Zfp281, LOC667686, EG623818, Nr5a2, Rnu7-ps3, LOC100042567
Downstream geneLOC100043143, Ptprc, LOC100042596, Atp6v1g3, LOC100042600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202L03.bB6Ng01-202L03.g
ACCGA023122GA023123
length1,2051,087
definitionB6Ng01-202L03.b B6Ng01-202L03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatgtatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactgtggagttcca
ttaggtcccatttgtcaattctcgatcttatagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctatacgtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttaatacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttcccctggatggttttagctcccttgtcgaagatcaaat
gaccataggtgtgtgggttcatttctaggtcttcaattctattccattgg
aatacttttctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaagttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcatattgctccttctaattcgttgaagaattgagttgaaatttt
gatagggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagataatttatattat
ttgtgactattgagaagggtgttgtttccctaatttctttctcagcctgt
ttattcttttgtgtagagaaaggcattgacttgtttgagtttatcagcta
cttcacgaagctgtttattcaggctaagggagctctctgggtgcattttt
aaggttcacttatatttacctatccatatcatctgccaaaagtgattttg
gacttctcgtttcaattgtaatccccctggaatcctcccttgtgtggtag
ctcga
gaattctctctcatttttgccttccataggaatgtaattccagtttgtga
ttttgctccagtggcaattgattggggcaggggactggacagaagtgaag
ggggtaaaggagaagccctgaggaagggggagccctgaggaaggggagcc
ctgctggcttttcacattcacctattttctgctttcatccttagaacaca
gcgggcacatctcttcctcttttgatgaccacttttggagacgaacaggg
cagatcttctgtggtttagactgtcagctcattccaatttatttctttga
ggcctgaataacaattcaccactaaccaaatatttatggtccacacacag
agggctctggctactgtggttacagatgaaggcttgagtgggaaatgata
gattgttgggagcatgtgaagtggaagatgcccagagaatcacacaggaa
ccagattctatgtacaagcacatgccttctgtttctgtcatgcctttagt
ctcttattcttgcgatctgcatagacaatatgctacctgaagccagagag
gtccccatgattaaagatgcttctcagaggttataactactattgtgaga
atgctttattgcagacaagaaacaacatcccttcagtttttgaattatat
caatggcatctgtgatgctatgaatgaaaatgggccccacagactcatag
ggctggtcatattggaggtggggccttttttgaagaagtgtttcaagggt
cctgggtggactttgaagtttcagaaactcaagccagacccagtgtccct
ttctttacttgctgcctgtagatccgatgtagaactctaagaccctctct
gtctgcatacggccattcttttctccatgataataatggactagaccctg
aacctgtaagccagccccaattaaatgttttccttttataagagttgctg
tgtcatggtgtctcttcacagcatggaaacctaactagataccatcttac
ctgggatagatctcagcacttctctttattaagtacccacatgaaactga
atcttattttctaggaacacacctttgattggggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_139373660_139374750
seq2: B6Ng01-202L03.g_67_1153

seq1  GAATTCTCTCTCATTTTTGCCTTCCATAGGAATGTAATTCCAGTTTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCATTTTTGCCTTCCATAGGAATGTAATTCCAGTTTGTGA  50

seq1  TTTTGCTCCAGTGGCAATTGATTGGGGCAGGGGACTGGACAGAAGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCCAGTGGCAATTGATTGGGGCAGGGGACTGGACAGAAGTGAAG  100

seq1  GGGGTAAAGGAGAAGCCCTGAGGAAGGGGGAGCCCTGAGGAAGGGGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAAGGAGAAGCCCTGAGGAAGGGGGAGCCCTGAGGAAGGGGAGCC  150

seq1  CTGCTGGCTTTTCACATTCACCTATTTTCTGCTTTCATCCTTAGAACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCTTTTCACATTCACCTATTTTCTGCTTTCATCCTTAGAACACA  200

seq1  GCGGGCACATCTCTTCCTCTTTTGATGACCACTTTTGGAGACGAACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCACATCTCTTCCTCTTTTGATGACCACTTTTGGAGACGAACAGGG  250

seq1  CAGATCTTCTGTGGTTTAGACTGTCAGCTCATTCCAATTTATTTCTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTCTGTGGTTTAGACTGTCAGCTCATTCCAATTTATTTCTTTGA  300

seq1  GGCCTGAATAACAATTCACCACTAACCAAATATTTATGGTCCACACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAATAACAATTCACCACTAACCAAATATTTATGGTCCACACACAG  350

seq1  AGGGCTCTGGCTACTGTGGTTACAGATGAAGGCTTGAGTGGGAAATGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTGGCTACTGTGGTTACAGATGAAGGCTTGAGTGGGAAATGATA  400

seq1  GATTGTTGGGAGCATGTGAAGTGGAAGATGCCCAGAGAATCACACAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTGGGAGCATGTGAAGTGGAAGATGCCCAGAGAATCACACAGGAA  450

seq1  CCAGATTCTATGTACAAGCACATGCCTTCTGTTTCTGTCATGCCTTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCTATGTACAAGCACATGCCTTCTGTTTCTGTCATGCCTTTAGT  500

seq1  CTCTTATTCTTGCGATCTGCATAGACAATATGCTACCTGAAGCCAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTCTTGCGATCTGCATAGACAATATGCTACCTGAAGCCAGAGAG  550

seq1  GTCCCCATGATTAAAGATGCTTCTCAGAGGTTATAACTACTATTGTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCATGATTAAAGATGCTTCTCAGAGGTTATAACTACTATTGTGAGA  600

seq1  ATGCTTTATTGCAGACAAGAAACAACATCCCTTCAGTTTTTGAATTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTATTGCAGACAAGAAACAACATCCCTTCAGTTTTTGAATTATAT  650

seq1  CAATGGCATCTGTGATGCTATGAATGAAAATGGGCCCCACAGACTCATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCATCTGTGATGCTATGAATGAAAATGGGCCCCACAGACTCATAG  700

seq1  GGCTGGTCATATTGGAGGTGGGGCCTTTTTTGAAGAAGTGTTTCAAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTCATATTGGAGGTGGGGCCTTTTTTGAAGAAGTGTTTCAAGGGT  750

seq1  CCTGGGTGGACTTTGAAGTTTCAGAAACTCAAGCCAGACCCAGTGTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGGACTTTGAAGTTTCAGAAACTCAAGCCAGACCCAGTGTCCCT  800

seq1  TTCTTTACTTGCTGCCTGTAGATCCGATGTAGAACTCTAAGACCCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTTGCTGCCTGTAGATCCGATGTAGAACTCTAAGACCCTCTCT  850

seq1  GTCTGCATACGGCCATTCTTTTCTCCATGATAATAATGGACTAGACCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCATACGGCCATTCTTTTCTCCATGATAATAATGGACTAGACCCTG  900

seq1  AACCTGTAAGCCAGCCCCAATTAAATGTTTTCC-TTTATAAGAGTTGCTG  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACCTGTAAGCCAGCCCCAATTAAATGTTTTCCTTTTATAAGAGTTGCTG  950

seq1  TGGTCATGGTGTCTCTTCACAGCAATGGAAACCTAACTAAGATACCATCT  999
      | ||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  T-GTCATGGTGTCTCTTCACAGC-ATGGAAACCTAACT-AGATACCATCT  997

seq1  TACCTGGGATAGATCTCAGCACTTCTCTTTAATTAAAGTACCCCACATGA  1049
      |||||||||||||||||||||||||||||||  | ||||| |||||||||
seq2  TACCTGGGATAGATCTCAGCACTTCTCTTTA--TTAAGTA-CCCACATGA  1044

seq1  AACTGAATCTTA-TTTCTAGGAACACA-CTTTGATTTGGGGTCT  1091
      |||||||||||| |||||||||||||| |||||| |||||||||
seq2  AACTGAATCTTATTTTCTAGGAACACACCTTTGA-TTGGGGTCT  1087