BAC Information

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BAC

Clone NameB6Ng01-203G03
Chromosome1 (Build37)14 (Build37)
Map Location 144,275,381 - 144,275,72143,597,565 - 43,598,766
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203G03.bB6Ng01-203G03.g
ACCGA023613GA023614
length8991,199
definitionB6Ng01-203G03.b B6Ng01-203G03.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(144,275,381 - 144,275,721)(43,597,565 - 43,598,766)
sequence
gaattctgcactaaacccatctggtcccgagcttttgttggatcggagat
tttacccattgcttctaattctttaggggttatgagacagttcacatggt
ttatctgatcctgatttaattatggtacctggtatctgtcaaaatttgtc
cattgcatccagattttccagttttgagtacagttttgtagtaggatttg
agggtctctctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttctttcttccttccttccttccttcctt
ccttccttccttcctttctttctttctttctttctttctttgtttttatt
agcttggtttctgtcattatgtctcccttttcatttctgattttgttaat
ttggatactgtctctgtgccatcaggttagtctggctaagggattttcta
tcttgtagattttctcaaagaatcatctggttttgttgattcattgtata
gtttttttgtttctttggttaatttcagccccgagtttgattacttcctg
ccatctactcttcttgggtatatttgcttctttttgttctagaattttca
gatgttctgtcaagctgctagtgtatactctctccagtttcttttaggag
gtactcagagctatgagttttccatttaacatagttttctttgtgtccca
taagtttgggtgtgttgtaacattgttttcactgaattttaaaaagtctt
taatttctttctttaattcttccttggcctagttataattgagagagcat
tgttcagcttcatgtgtatgtgggctttctgttgtttttgttattattaa
gacagccttagtctgtggtgatctgatagttgcatgagatatttcattt

gaattcatagaagataaggattcctacaggtgagtcccagacacagctga
gacccagcactaggcagggaatggttgtggccttctgggactttgtacaa
aagtaagagctctagttctatactctctgtttcttaataggagccctccc
atgaggcatgggtcttggatttgtacctcttggactcagttttcctaagt
gtgaatattgtccaagaccctccagtctttattcttccaaattcaggatc
ttctgcatcgaaaccatttccaccatgctgggaatctcaagcaaccctga
acttctagggttctgacagcagattacaagatctgggatccatgacaaaa
atggaaagagtttataccttttgggtcttctctctccctaagagggcatt
gccctctccctactgatggttttctggtactacacacatatgagcaacca
tgaggaagttttcctcttctgtgatgtatatggaacactcttggtgtagg
gttatcagaaatattttgagtcttgttacatgtggctggtctctggattt
gacctgcctctatttggtacttatggatatacagtgtactctagtctcgg
gctttctggggatcagagcccttgcagggatcataatatttggaagagtg
gcaggcaaatcgaagataggtgggaatcaacatttatgttttgtttgttt
gtggttcagcatcaggcacacccacctcctgaaagaatgcaatcaattga
agaaaaaaagtaaggatgttgctgaatgagaacagaaagctgctggtaga
gcaggctgaccaggaggcatcctttggtgaagaaaagagttctgtgatga
gaccagcaagaacatacatcccaagtgcaaagcagcagcaggtaggatga
tgcatatcagaggcagatttccctcatggctaaccatacatatagacatc
aatgtaacaatccaccaacttatccaggcactcacctctgtctcttcaag
tgttttattttagtgatcatctacaaggctttctgtggaggtagactttt
cagaaactgcatgtttagcgacaaattttctgccctgctatataatctgg
cagttcaactaaggagataagtgataacacatccaacctcatgcattaag
gtttgaatgggtgtcggctagaacttttctttagaatagatcagagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144275381_144275721
seq2: B6Ng01-203G03.b_46_513 (reverse)

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTATCCAGACTCACTAG  50
      ||||||||||||||| |||||||||| || |||||| ||||||| ||  |
seq2  TTCTTTGAGAAAATCTACAAGATAGAAAATCCCTTAGCCAGACTAACCTG  50

seq1  AGGGCAAAGGGACAGCATCCTGATTAAAAAAGTCAGAAATAAAAAGGCAG  100
      | |||| || ||||| ||||  ||||| ||| |||||||| |||||| ||
seq2  ATGGCACAGAGACAGTATCCAAATTAACAAAATCAGAAATGAAAAGGGAG  100

seq1  ACATAACAACAGATCC----------------------------------  116
      ||||||  |||||  |                                  
seq2  ACATAATGACAGAAACCAAGCTAATAAAAACAAAGAAAGAAAGAAAGAAA  150

seq1  ----------------------------------------TGAAGAAATC  126
                                               |||||||  
seq2  GAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGA  200

seq1  CA------------------------------------------------  128
       |                                                
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  250

seq1  -------------AAACACCATCAGATCCTTCTACAAATGGCTATACTGA  165
                   | | ||| ||| ||||| |||||||   || ||||  
seq2  GAAAGAAAGAAAGAGAGACCCTCAAATCCTACTACAAA--ACTGTACT--  296

seq1  ACAAAACTAGAGAACCTGGATGAAATGGGCAAGTTTCTAGACAGATACCA  215
       ||||||| || || ||||||| ||||| ||| ||  | |||||||||||
seq2  -CAAAACTGGAAAATCTGGATGCAATGGACAAATT--TTGACAGATACCA  343

seq1  GGTACCAAAGTTAAATCAAGATCAGGTTAATGATCTAAACAGTCCTATAT  265
      ||||||| | |||||||| |||||| | ||  || | ||| |||  ||| 
seq2  GGTACCATAATTAAATCAGGATCAGATAAACCATGTGAACTGTCTCATAA  393

seq1  CCCCTAAAGAAATAGAAGCAGTCATTAATAGTCCCTCAACCAAAAAAAGC  315
      ||||||||||| |||||||| |   ||| | || |  | |||| ||||||
seq2  CCCCTAAAGAATTAGAAGCAATGGGTAA-AATCTCCGATCCAACAAAAGC  442

seq1  CCAAGACCAGATGGGTTTAGTGCAGA  341
       |  ||||||||||||||||||||||
seq2  TCGGGACCAGATGGGTTTAGTGCAGA  468


seq1: chr14_43597565_43598766
seq2: B6Ng01-203G03.g_61_1259

seq1  GAATTCATAGAAGATAAGGATTCCTACAGGTGAGTCCCAGACACAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAAGATAAGGATTCCTACAGGTGAGTCCCAGACACAGCTGA  50

seq1  GACCCAGCACTAGGCAGGGAATGGTTGTGGCCTTCTGGGACTTTGTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCACTAGGCAGGGAATGGTTGTGGCCTTCTGGGACTTTGTACAA  100

seq1  AAGTAAGAGCTCTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGCTCTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCC  150

seq1  ATGAGGCATGGGTCTTGGATTTGTACCTCTTGGACTCAGTTTTCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCATGGGTCTTGGATTTGTACCTCTTGGACTCAGTTTTCCTAAGT  200

seq1  GTGAATATTGTCCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATTGTCCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATC  250

seq1  TTCTGCATCGAAACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATCGAAACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGA  300

seq1  ACTTCTAGGGTTCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGGGTTCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAA  350

seq1  ATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTCTCCCTAAGAGGGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTCTCCCTAAGAGGGCATT  400

seq1  GCCCTCTCCCTACTGATGGTTTTCTGGTACTACACACATATGAGCAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCCCTACTGATGGTTTTCTGGTACTACACACATATGAGCAACCA  450

seq1  TGAGGAAGTTTTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGTTTTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTAGG  500

seq1  GTTATCAGAAATATTTTGAGTCTTGTTACATGTGGCTGGTCTCTGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAGAAATATTTTGAGTCTTGTTACATGTGGCTGGTCTCTGGATTT  550

seq1  GACCTGCCTCTATTTGGTACTTATGGATATACAGTGTACTCTAGTCTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCCTCTATTTGGTACTTATGGATATACAGTGTACTCTAGTCTCGG  600

seq1  GCTTTCTGGGGATCAGAGCCCTTGCAGGGATCATAATATTTGGAAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGGGGATCAGAGCCCTTGCAGGGATCATAATATTTGGAAGAGTG  650

seq1  GCAGGCAAATCGAAGATAGGTGGGAATCAACATTTATGTTTTGTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAAATCGAAGATAGGTGGGAATCAACATTTATGTTTTGTTTGTTT  700

seq1  GTGGTTCAGCATCAGGCACACCCACCTCCTGAAAGAATGCAATCAATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCAGCATCAGGCACACCCACCTCCTGAAAGAATGCAATCAATTGA  750

seq1  AGAAAAAAAGTAAGGATGTTGCTGAATGAGAACAGAAAGCTGCTGGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGTAAGGATGTTGCTGAATGAGAACAGAAAGCTGCTGGTAGA  800

seq1  GCAGGCTGACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATGA  850

seq1  GACCAGCAAGAACATACATCCCAAGTGCAAAGCAGCAGCAGGTAGGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCAAGAACATACATCCCAAGTGCAAAGCAGCAGCAGGTAGGATGA  900

seq1  TGCATATCAGAGGCAGATTTCCCTCATGGCTAACCATACATATAGACAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCATATCAGAGGCAGATTTCCCTCATGGCTAACCATACATATAGAC-AT  949

seq1  CAATGTAACAATCCACCAACTTATCCAGGCACTCACCTCTGTCTCCTCCA  1000
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  CAATGTAACAATCCACCAACTTATCCAGGCACTCACCTCTGTCT-CTTCA  998

seq1  AGTG-TTTATTTAGGTGATCATCTACAAGGCTTTCTGTGGAGGTAGACTT  1049
      |||| |||||||  ||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTATTTTAGTGATCATCTACAAGGCTTTCTGTGGAGGTAGACTT  1048

seq1  TTCAAGAAACTGCATGTTTAGCAAACAAATTTTTCTGCCCTGC--TATAA  1097
      ||| ||||||||||||||||||  ||||| |||||||||||||  |||||
seq2  TTC-AGAAACTGCATGTTTAGC-GACAAA-TTTTCTGCCCTGCTATATAA  1095

seq1  TCT-GCAGTTC-ACTAGGGGAGATTAGTTGATTACACATCACAACTCTAC  1145
      ||| ||||||| ||||  |||||| || |||| ||||||| |||| || |
seq2  TCTGGCAGTTCAACTA-AGGAGATAAG-TGATAACACATC-CAAC-CT-C  1140

seq1  ATGCTATTAA-GTTTGAATGGTGTTGGGCTAGAGCCTTTCTTTAGAATAG  1194
      |||| ||||| ||||||||||   | ||||||| | ||||||||||||||
seq2  ATGC-ATTAAGGTTTGAATGGGTGTCGGCTAGAACTTTTCTTTAGAATAG  1189

seq1  --TAGAGAGC  1202
         |||||||
seq2  ATCAGAGAGC  1199


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