BAC Information

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BAC

Clone NameB6Ng01-203H09
Chromosome1 (Build37)
Map Location 65,708,897 - 65,709,717
singlet/doubletsinglet
Overlap genenone
Upstream geneCcnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
Downstream geneCrygf, LOC667781, EG667786, Mtap2, C030018G13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203H09.bB6Ng01-203H09.g
ACCGA023667GA023668
length8211,204
definitionB6Ng01-203H09.b B6Ng01-203H09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttcaatgcttgtaagagactttgcatagattccaggagta
tgggatctccactcttctcccaatgcaaaacagttctcacctcaaaggga
atcagaactagtttattctaagtcaaatatgagtgaccatggccaggaaa
tgtgaattcatattacttcaacttccatgttccaacatagaagcagtttc
aagaagcatttttaataacagaaaaacaaacaaacaaatcaagatacttt
aaaaatccattagacagtttaaagcaaagtagagaaattgctataaatgt
tagataccatctgactacattctcagatatttggttggaagaacctaggt
gtatgtgcatgcatatgccaagggtgacctgatggtcacgaagatgctag
ctcatacacaaggaaaggcaataaatgactattatgaatgctaaagatgt
cccaaggtaatttggctctggacttgtattatttcagactctgtatgatt
agttaatttgccttgcagaaggttcagtggaaattgaagcttatttccag
gaattttgttcacatttctcatgtcacctaaatattctgtcttcagttgc
taaattgctagttaaatcctatgagatttctatctagccaggagttttct
aataaagaacaaagacagactgttatttgtaaatcacatggacaggaaca
aaccccttttggcctagtcggccatcactggaaagagaggcccattggac
acgcaaactttatatgccccagtacaggggaacgccagggccaaaaaggg
ggagtgggtgggtaggggagt
gaattcagaactcttcagctggggaacggtggtaatgaagtgttcccgca
acacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacaggatacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaatgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtacctctggccttgaactttctaacgaaattcaagaca
gtctatcagaagtaaagtgggaaatagctttacaaggtatgtttggcctt
gaactttctctagtgttaggagcctttttgttccttttcacatgttatca
agcggttaaggcagggctgaaaattttggatgaaattcagggcaatctat
cagaagtaaagcggggagagagagtaggagcaaagaggaaatatggcgca
caaaataagtatacaggcctttccacaggtcttgaacctgaggaaaagtt
taggtcaggtaagaatacctggggagagattagaaggaaggagaaggaaa
aagaaaagaaaaaagatcaatcagcgaaggtctctaggagaaggagccta
tactcatcaccagatgagctcaaggagccagttcttagtagttctgaatc
agatgaaaaggctattagggcctggaaggcgctctcccgagcaggtgaag
ccactggacaactaacaaagatcgtccagagacctcaggagtcattctca
gattttgtggccagaatgacagaggcagcagagcgtatttttggagattc
agagcaagccgcacctctggtagaacagctcatttatgagcaagccacac
aggagtgccgagcggccacagccccaagaaagaacaaggtttacagactg
gcttagggtttgtcggaagcttgggggactcctcattatgcgttactttc
cattcagtatggagaaatttacttagggccagctaattttgttaaaagtc
tttcttcagttatattgttacagaattggaccggctgattggaacagacc
tttcggaaatgagaccttacatattcaggccaactcccacaacgcttgac
tggtcctggaccaagatttacctaatggaatctccttcagcattcgtctt
agaatgctggcaatactgagattaccttggcttggtgattatgatgggtg
ctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_65708897_65709717
seq2: B6Ng01-203H09.b_46_866

seq1  GAATTCTTTCTTCAATGCTTGTAAGAGACTTTGCATAGATTCCAGGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCAATGCTTGTAAGAGACTTTGCATAGATTCCAGGAGTA  50

seq1  TGGGATCTCCACTCTTCTCCCAATGCAAAACAGTTCTCACCTCAAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCTCCACTCTTCTCCCAATGCAAAACAGTTCTCACCTCAAAGGGA  100

seq1  ATCAGAACTAGTTTATTCTAAGTCAAATATGAGTGACCATGGCCAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACTAGTTTATTCTAAGTCAAATATGAGTGACCATGGCCAGGAAA  150

seq1  TGTGAATTCATATTACTTCAACTTCCATGTTCCAACATAGAAGCAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTCATATTACTTCAACTTCCATGTTCCAACATAGAAGCAGTTTC  200

seq1  AAGAAGCATTTTTAATAACAGAAAAACAAACAAACAAATCAAGATACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCATTTTTAATAACAGAAAAACAAACAAACAAATCAAGATACTTT  250

seq1  AAAAATCCATTAGACAGTTTAAAGCAAAGTAGAGAAATTGCTATAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCATTAGACAGTTTAAAGCAAAGTAGAGAAATTGCTATAAATGT  300

seq1  TAGATACCATCTGACTACATTCTCAGATATTTGGTTGGAAGAACCTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACCATCTGACTACATTCTCAGATATTTGGTTGGAAGAACCTAGGT  350

seq1  GTATGTGCATGCATATGCCAAGGGTGACCTGATGGTCACGAAGATGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGCATGCATATGCCAAGGGTGACCTGATGGTCACGAAGATGCTAG  400

seq1  CTCATACACAAGGAAAGGCAATAAATGACTATTATGAATGCTAAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACACAAGGAAAGGCAATAAATGACTATTATGAATGCTAAAGATGT  450

seq1  CCCAAGGTAATTTGGCTCTGGACTTGTATTATTTCAGACTCTGTATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGTAATTTGGCTCTGGACTTGTATTATTTCAGACTCTGTATGATT  500

seq1  AGTTAATTTGCCTTGCAGAAGGTTCAGTGGAAATTGAAGCTTATTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTGCCTTGCAGAAGGTTCAGTGGAAATTGAAGCTTATTTCCAG  550

seq1  GAATTTTGTTCACATTTCTCATGTCACCTAAATATTCTGTCTTCAGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTTCACATTTCTCATGTCACCTAAATATTCTGTCTTCAGTTGC  600

seq1  TAAATTGCTAGTTAAATCCTATGAGATTTCTATCTAGCCAGGAGTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGCTAGTTAAATCCTATGAGATTTCTATCTAGCCAGGAGTTTTCT  650

seq1  AATAAAGAACAAAGACAGACTGTTATTTGTAAATCACATGGACAGGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAACAAAGACAGACTGTTATTTGTAAATCACATGGACAGGAACA  700

seq1  AACCCCTTTTGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTTTTGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGAC  750

seq1  ACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG  800

seq1  GGAGTGGGTGGGTAGGGGAGT  821
      |||||||||||||||||||||
seq2  GGAGTGGGTGGGTAGGGGAGT  821