BAC Information

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BAC

Clone NameB6Ng01-207F20
Chromosome1 (Build37)
Map Location 132,213,497 - 132,385,550
singlet/doubletdoublet
Overlap geneDaf2, Cd55
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneZp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207F20.bB6Ng01-207F20.g
ACCGA026536GA026537
length1,0951,047
definitionB6Ng01-207F20.b B6Ng01-207F20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,384,435 - 132,385,550)(132,213,497 - 132,214,535)
sequence
gaattctttaggctccagtttgagctgaagtccaaagtggcccggctccc
caaagacctcaggccctaatttgttccaggagataatgccatagcagtaa
catgtttgcctggttacaaggacttcctgagaggccagcaaggtttagct
ggcactggatttgaaataacctagtgtctctgcagtttgattctcagcaa
ttttattttatttttttaaaaatgcatgtagtaaacacctttatgtagat
aaaaagaaatatcaatttgaccttcttttcaaactcccagataaattata
tttgaaccaaaaataaagtaattgctttcaggatgcaaagtcattgttta
aaatttactggttaaatatattttattataaacatgtggcaagtacagct
tattcatattactctcacttggcatccaaaacatagttttataaagaaat
aatgccacatgatgtattcctcgggattatgggaacgctataaattatag
tgggtccaggaacataaaaaacaaaaaaaatagaagctttggagatgtgt
ttgagagttggttttttaaattaaaaatcttgaaacttgaccaaggcaac
tgtgacttcatatgtcaaatatggatattataacacactgaaagcattac
tgtgaacacttattgtaaatgtcaagtagaattgcacacgaatataccat
aaacagtacttgccacacgcctggtgttcgatgtgtttgaataccttact
agatatacaaaagcatgtgggggaatgaccaggtgagtttcttgaagaac
aaaggtgtcagaaaaaaaaaaaaaaccaaaacaatgaaaaacgaaaaacc
aaaaccagcagtaacagcaacaaaccaaaaaccagagctcacaaagacct
gcagtggaggtaaggaagctacaaacagctcaggaaaatgaagcctggga
gcgaaaagcacttggcaggagaggaaagtggtcccatgagggtctacgag
tctgtaatctcagactgttggtacagcaagaactgccaattataaacgac
acttggtgatctgatgcactctctttatgagatttcgtcactgct
gaattcaacctcctcatcaaaaagaaaattcctaaacttttatatcatgt
ggctgttatttcactatatttgtcttaactgaggcaaaatgtctgtggac
tattcagctaggcattagtgatgtcacagcatgggcactttgctctctct
atagagacatagtacatccatccttgatctctgccacaactccagaaaac
aaacattcttcattaatctatataccttggcatatgggaatagtctcata
ccccaagtctggccagttgttatatccattttcaatgaacaatagcaatt
ggtccaagctggagatattatgttttctttagttgacgtttagctactgg
ttttctagtgtaaatattcaggtaacaggaaaatcaagtcatttttttgc
aagtgggcactcaattcagagctcaattggagctcatgaagtaccccaca
accatgagtaaatacattttcaatgtaggtatcaaaaaaacaaagccaga
aatggaatataaatcctgggctagtctgtgaaataatgctgtaaatttat
agtgctttcccagactggatatctttgtagatccctgagctaataaatgt
tttcaattgtgtttaagttgctaggagttgtactgttcttctgtgaaaca
tttggcctcttacagagataaataaatgcagtcaaagtataaagtcaacc
tattcatccctgtggtcataaggctttgaaacagggatttaaaaatgaag
agatgaagattgcagaggctctacagtaaaacagcagtattaaagaaggg
aggtcgaaggacagatggagagaaagggaatacactggggaaggtggcac
ttgtaaggagactgtattaacatcaaggacttgaaggctacattacaggt
caggacacagcccgaatgcacgctttcctagttaactcacagaatgcttc
atcccaatgtatttcaaaggtgtatggatccccctgccccctgcaaaata
cccataaccccttgaagaagtgatttctctcctttatttaacaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132384435_132385550
seq2: B6Ng01-207F20.b_42_1136 (reverse)

seq1  AGCAGTGACGAAATCTCTATAAAGAGAGGTTTCCATTCAGGATCACACAA  50
      ||||||||||||||||| ||||||||||   | || ||| |||||| |||
seq2  AGCAGTGACGAAATCTC-ATAAAGAGAG---TGCA-TCA-GATCAC-CAA  43

seq1  GTGTCCTTTTATAAATGGCAGTTTCTTTGCTTGTACCAACAAGTCTGGAG  100
      |||| | ||||||| ||||||||   |||| ||||||||| ||||| |||
seq2  GTGT-CGTTTATAATTGGCAGTT--CTTGC-TGTACCAAC-AGTCT-GAG  87

seq1  ATTTACAGACTCCGTAGAACCCCTCATTGGGAACCACTTTCCTCTCCTGC  150
      | ||||||||| ||||||  |||||||  || ||||||||||||||||||
seq2  A-TTACAGACT-CGTAGA--CCCTCAT--GGGACCACTTTCCTCTCCTGC  131

seq1  CAAGTGCTTTTCGCTCCCAGGCTTCATTTTCCTGAGCTGTTTGTAGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTTTTCGCTCCCAGGCTTCATTTTCCTGAGCTGTTTGTAGCTTC  181

seq1  CTTTACCTCCACTGCAGGTCTTTGTGAGCTCTGGTTTTTGGGTTTGTTGC  250
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  C-TTACCTCCACTGCAGGTCTTTGTGAGCTCTGGTTTTT-GGTTTGTTGC  229

seq1  TGTTACTGCTGGTTTTGGTTTTTCGTTTTTCATTGTTTTGGTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTGCTGGTTTTGGTTTTTCGTTTTTCATTGTTTTGGTTTTTTTTT  279

seq1  TTTTTCTGACACCTTTGTTCTTCAAGAAACTCACCTGGTCATTCCCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGACACCTTTGTTCTTCAAGAAACTCACCTGGTCATTCCCCCAC  329

seq1  ATGCTTTTGTATATCTAGTAAGGTATTCAAACACATCGAACACCAGGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTGTATATCTAGTAAGGTATTCAAACACATCGAACACCAGGCGT  379

seq1  GTGGCAAGTACTGTTTATGGTATATTCGTGTGCAATTCTACTTGACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAGTACTGTTTATGGTATATTCGTGTGCAATTCTACTTGACATTT  429

seq1  ACAATAAGTGTTCACAGTAATGCTTTCAGTGTGTTATAATATCCATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGTGTTCACAGTAATGCTTTCAGTGTGTTATAATATCCATATTT  479

seq1  GACATATGAAGTCACAGTTGCCTTGGTCAAGTTTCAAGATTTTTAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATGAAGTCACAGTTGCCTTGGTCAAGTTTCAAGATTTTTAATTTA  529

seq1  AAAAACCAACTCTCAAACACATCTCCAAAGCTTCTATTTTTTTTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAACTCTCAAACACATCTCCAAAGCTTCTATTTTTTTTGTTTTT  579

seq1  TATGTTCCTGGACCCACTATAATTTATAGCGTTCCCATAATCCCGAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCTGGACCCACTATAATTTATAGCGTTCCCATAATCCCGAGGAA  629

seq1  TACATCATGTGGCATTATTTCTTTATAAAACTATGTTTTGGATGCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATGTGGCATTATTTCTTTATAAAACTATGTTTTGGATGCCAAGT  679

seq1  GAGAGTAATATGAATAAGCTGTACTTGCCACATGTTTATAATAAAATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAATATGAATAAGCTGTACTTGCCACATGTTTATAATAAAATATA  729

seq1  TTTAACCAGTAAATTTTAAACAATGACTTTGCATCCTGAAAGCAATTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAGTAAATTTTAAACAATGACTTTGCATCCTGAAAGCAATTACT  779

seq1  TTATTTTTGGTTCAAATATAATTTATCTGGGAGTTTGAAAAGAAGGTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGGTTCAAATATAATTTATCTGGGAGTTTGAAAAGAAGGTCAA  829

seq1  ATTGATATTTCTTTTTATCTACATAAAGGTGTTTACTACATGCATTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATTTCTTTTTATCTACATAAAGGTGTTTACTACATGCATTTTTA  879

seq1  AAAAAATAAAATAAAATTGCTGAGAATCAAACTGCAGAGACACTAGGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAATAAAATTGCTGAGAATCAAACTGCAGAGACACTAGGTTA  929

seq1  TTTCAAATCCAGTGCCAGCTAAACCTTGCTGGCCTCTCAGGAAGTCCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATCCAGTGCCAGCTAAACCTTGCTGGCCTCTCAGGAAGTCCTTG  979

seq1  TAACCAGGCAAACATGTTACTGCTATGGCATTATCTCCTGGAACAAATTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGGCAAACATGTTACTGCTATGGCATTATCTCCTGGAACAAATTA  1029

seq1  GGGCCTGAGGTCTTTGGGGAGCCGGGCCACTTTGGACTTCAGCTCAAACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGAGGTCTTTGGGGAGCCGGGCCACTTTGGACTTCAGCTCAAACT  1079

seq1  GGAGCCTAAAGAATTC  1116
      ||||||||||||||||
seq2  GGAGCCTAAAGAATTC  1095

seq1: chr1_132213497_132214535
seq2: B6Ng01-207F20.g_64_1110

seq1  GAATTCAACCTCCTCATCAAAAAGAAAATTCCTAAACTTTTATATCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTCCTCATCAAAAAGAAAATTCCTAAACTTTTATATCATGT  50

seq1  GGCTGTTATTTCACTATATTTGTCTTAACTGAGGCAAAATGTCTGTGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTATTTCACTATATTTGTCTTAACTGAGGCAAAATGTCTGTGGAC  100

seq1  TATTCAGCTAGGCATTAGTGATGTCACAGCATGGGCACTTTGCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCTAGGCATTAGTGATGTCACAGCATGGGCACTTTGCTCTCTCT  150

seq1  ATAGAGACATAGTACATCCATCCTTGATCTCTGCCACAACTCCAGAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACATAGTACATCCATCCTTGATCTCTGCCACAACTCCAGAAAAC  200

seq1  AAACATTCTTCATTAATCTATATACCTTGGCATATGGGAATAGTCTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTTCATTAATCTATATACCTTGGCATATGGGAATAGTCTCATA  250

seq1  CCCCAAGTCTGGCCAGTTGTTATATCCATTTTCAATGAACAATAGCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTCTGGCCAGTTGTTATATCCATTTTCAATGAACAATAGCAATT  300

seq1  GGTCCAAGCTGGAGATATTATGTTTTCTTTAGTTGACGTTTAGCTACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAAGCTGGAGATATTATGTTTTCTTTAGTTGACGTTTAGCTACTGG  350

seq1  TTTTCTAGTGTAAATATTCAGGTAACAGGAAAATCAAGTCATTTTTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGTGTAAATATTCAGGTAACAGGAAAATCAAGTCATTTTTTTGC  400

seq1  AAGTGGGCACTCAATTCAGAGCTCAATTGGAGCTCATGAAGTACCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCACTCAATTCAGAGCTCAATTGGAGCTCATGAAGTACCCCACA  450

seq1  ACCATGAGTAAATACATTTTCAATGTAGGTATCAAAAAAACAAAGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGTAAATACATTTTCAATGTAGGTATCAAAAAAACAAAGCCAGA  500

seq1  AATGGAATATAAATCCTGGGCTAGTCTGTGAAATAATGCTGTAAATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATATAAATCCTGGGCTAGTCTGTGAAATAATGCTGTAAATTTAT  550

seq1  AGTGCTTTCCCAGACTGGATATCTTTGTAGATCCCTGAGCTAATAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTCCCAGACTGGATATCTTTGTAGATCCCTGAGCTAATAAATGT  600

seq1  TTTCAATTGTGTTTAAGTTGCTAGGAGTTGTACTGTTCTTCTGTGAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTGTGTTTAAGTTGCTAGGAGTTGTACTGTTCTTCTGTGAAACA  650

seq1  TTTGGCCTCTTACAGAGATAAATAAATGCAGTCAAAGTATAAAGTCAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTCTTACAGAGATAAATAAATGCAGTCAAAGTATAAAGTCAACC  700

seq1  TATTCATCCCTGTGGTCATAAGGCTTTGAAACAGGGATTTAAAAATGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCCCTGTGGTCATAAGGCTTTGAAACAGGGATTTAAAAATGAAG  750

seq1  AGATGAAGATTGCAGAGGCTCTACAGTAAAACAGCAGTATTAAAGAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGATTGCAGAGGCTCTACAGTAAAACAGCAGTATTAAAGAAGGG  800

seq1  AGGTCGAAGGACAGATGGAGAGAAAGGGAATACACTGGGGAAGGTGGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGAAGGACAGATGGAGAGAAAGGGAATACACTGGGGAAGGTGGCAC  850

seq1  TTGTAAGGAGACTGTATTAACATCAAGGACTTG-AGGCTACATTACAGGT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGTAAGGAGACTGTATTAACATCAAGGACTTGAAGGCTACATTACAGGT  900

seq1  CAGGACACAG-CCGAATGCACGC-TTCCTAGTTAACTCACAGAATGCTCC  947
      |||||||||| |||||||||||| |||||||||||||||||||||||| |
seq2  CAGGACACAGCCCGAATGCACGCTTTCCTAGTTAACTCACAGAATGCTTC  950

seq1  AT-CCAATGTATTTC-AAGGTGTAT-GATCCCCCTGCCCCCTGC-AAATA  993
      || |||||||||||| ||||||||| |||||||||||||||||| |||||
seq2  ATCCCAATGTATTTCAAAGGTGTATGGATCCCCCTGCCCCCTGCAAAATA  1000

seq1  CCCATAACCCCTTGAGAAAGTGATTTC-CTCCTTTATTTAACAAAGA  1039
      |||||||||||||||  |||||||||| |||||||||||||||||||
seq2  CCCATAACCCCTTGAAGAAGTGATTTCTCTCCTTTATTTAACAAAGA  1047