BAC Information

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BAC

Clone NameB6Ng01-210B23
Chromosome1 (Build37)
Map Location 144,373,014 - 144,421,977
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B23.bB6Ng01-210B23.g
ACCGA028547GA028548
length6681,060
definitionB6Ng01-210B23.b B6Ng01-210B23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,373,014 - 144,373,681)(144,420,911 - 144,421,977)
sequence
gaattcagagatttccctgaagtttatattagaacaacaatagtttagca
tttttatttttatttttttaaacttaaaatgtggaaacaataaagatgaa
aacaagtatagatttaggataatggaccaagctttatatagttccatctt
tataataaaacacaatttatttagaagtgggaacaaaacatccatggaag
gagttacagagacaaagtttggagctgagatgaaaggatggaccatgtag
agactgccatatccagggatccaccccataatcagcatctaaacgctgac
accattgcatacactagcaagattttatcgaaaggacccagatgtagctg
tctcttgtgagactatgccggggcctagcaaacacagaagaggatgatca
cagtcagctaatggatggatcacagggctcccaatggaggagctagagaa
agtagccaaggagctaaagggatctgcaaccctataggtggaacaacaat
atgaactaaccagtaccccggagctcttgactctagctgcatatgtatca
aaagatggcctagtcggccatcactggaaagagaggcccattggacaggc
aaactttatatgccccagtacaggggaacgccagggccaaaaagggggag
tgggtgggtaggggagtg
gaattcagtatcactaccaaatccattaaagatcttactaaaaatgtaca
attctgcctggcagtggcggcatatgcttttaatcccctttaatccagta
cttggaaggcagagtcaggcaaatttctgagtttgagccagcatggttta
cagagtgagttccaggacagtcaggactatacagaggaaccttgtctcaa
aaaaaaaaaaaaaacaaacaaacaaaaaaaaaacaaaaaacaaaaaacaa
aaaacaaacaaaaaaaaccaaccaaacaaaaaaaaacaaacaccccaaaa
caaaataaaaaacaaaacaaaacaacaaaaaacccaacatatcccccaaa
caaaaccaaaaccaaaaaagtacagttcttgtgtagtatcacatatcaag
aatcaggaagtacttaataaagaattgaggggtttattattgagatttct
tagtgggtaggagagatgtagataatgtgacagtgaatcaaagggaaaaa
ggcaaacttgtgagaaaattgttagatacgtttgaggaataaaagaaaga
gcaatattcattttagcatggccacacaagagaatctctttgggagctgt
taaaacacatgtgagtcttggctgtaccccagacccattaagtctaggtc
ctgcccgttagtacttttaaaatgttccccagacaatattcatgagaagc
caggttgttcactggcagaaatctctgcttttcagagaaaatctgtaata
aaatgtgactccttcttagactaagtaagctcccctgatcttttttttat
gtcacagcatatcctttcatatatttgggaagctactgtcattgacaaca
atcaaattatatttcacccacatatatatgactttgggctatggattaaa
tcccatttcaagaaataattatatccaattattttttcactaatgctaca
tatggtcttacttgcaatgggacaattctcagcatagttagtgattgttt
ttgtctaagagaaaattatgatgtagtgatctatgcaacttcttgtgatg
tctcaatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144373014_144373681
seq2: B6Ng01-210B23.b_43_710

seq1  GAATTCAGAGATTTCCCTGAAGTTTATATTAGAACAACAATAGTTTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATTTCCCTGAAGTTTATATTAGAACAACAATAGTTTAGCA  50

seq1  TTTTTATTTTTATTTTTTTAAACTTAAAATGTGGAAACAATAAAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTTTATTTTTTTAAACTTAAAATGTGGAAACAATAAAGATGAA  100

seq1  AACAAGTATAGATTTAGGATAATGGACCAAGCTTTATATAGTTCCATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTATAGATTTAGGATAATGGACCAAGCTTTATATAGTTCCATCTT  150

seq1  TATAATAAAACACAATTTATTTAGAAGTGGGAACAAAACATCCATGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAAACACAATTTATTTAGAAGTGGGAACAAAACATCCATGGAAG  200

seq1  GAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAG  250

seq1  AGACTGCCATATCCAGGGATCCACCCCATAATCAGCATCTAAACGCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCCATATCCAGGGATCCACCCCATAATCAGCATCTAAACGCTGAC  300

seq1  ACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTG  350

seq1  TCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGAGGATGATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGAGGATGATCA  400

seq1  CAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAA  450

seq1  AGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAAT  500

seq1  ATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCA  550

seq1  AAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAGGC  600

seq1  AAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAG  650

seq1  TGGGTGGGTAGGGGAGTG  668
      ||||||||||||||||||
seq2  TGGGTGGGTAGGGGAGTG  668

seq1: chr1_144420911_144421977
seq2: B6Ng01-210B23.g_63_1122 (reverse)

seq1  ACTAATGAGACATCAACAAAGAAGGTTTGCATAGATCAACTAACATCAAT  50
      |||| ||||||||||   ||||||  ||||||||||| ||| ||||||  
seq2  ACTATTGAGACATCA--CAAGAAG--TTGCATAGATC-ACT-ACATCATA  44

seq1  TATTTCTCTTAGAACAAAAAACAAATCAATTAAACTATGCTGAGAATTGT  100
        |||||||||| |||||||   ||||| |  ||||||||||||||||||
seq2  ATTTTCTCTTAG-ACAAAAA--CAATCACT--AACTATGCTGAGAATTGT  89

seq1  -CCATTGCAAGTAAGACCATATGTAGCATTAGTG-AAAAATAATTGGATA  148
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCCATTGCAAGTAAGACCATATGTAGCATTAGTGAAAAAATAATTGGATA  139

seq1  TAATTATTTCTTGAAATGGGATTTAATCCATAGCCC-AAGTCATATATAT  197
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAATTATTTCTTGAAATGGGATTTAATCCATAGCCCAAAGTCATATATAT  189

seq1  GTGGGTGAAATATAATTTGATTGTTGTCAATGACAGTAGCTTCCCAAATA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGAAATATAATTTGATTGTTGTCAATGACAGTAGCTTCCCAAATA  239

seq1  TATGAAAGGATATGCTGTGACAT-AAAAAAAGATCAGGGGAGCTTACTTA  296
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATGAAAGGATATGCTGTGACATAAAAAAAAGATCAGGGGAGCTTACTTA  289

seq1  GTCTAAGAAGGAGTCACATTTTATTACAGATTTTCTCTGAAAAGCAGAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGAAGGAGTCACATTTTATTACAGATTTTCTCTGAAAAGCAGAGA  339

seq1  TTTCTGCCAGTGAACAACCTGGCTTCTCATGAATATTGTCTGGGGAACAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCAGTGAACAACCTGGCTTCTCATGAATATTGTCTGGGGAACAT  389

seq1  TTTAAAAGTACTAACGGGCAGGACCTAGACTTAATGGGTCTGGGGTACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTACTAACGGGCAGGACCTAGACTTAATGGGTCTGGGGTACAG  439

seq1  CCAAGACTCACATGTGTTTTAACAGCTCCCAAAGAGATTCTCTTGTGTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTCACATGTGTTTTAACAGCTCCCAAAGAGATTCTCTTGTGTGG  489

seq1  CCATGCTAAAATGAATATTGCTCTTTCTTTTATTCCTCAAACGTATCTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTAAAATGAATATTGCTCTTTCTTTTATTCCTCAAACGTATCTAA  539

seq1  CAATTTTCTCACAAGTTTGCCTTTTTCCCTTTGATTCACTGTCACATTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCTCACAAGTTTGCCTTTTTCCCTTTGATTCACTGTCACATTAT  589

seq1  CTACATCTCTCCTACCCACTAAGAAATCTCAATAATAAACCCCTCAATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTCTCCTACCCACTAAGAAATCTCAATAATAAACCCCTCAATTC  639

seq1  TTTATTAAGTACTTCCTGATTCTTGATATGTGATACTACACAAGAACTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAGTACTTCCTGATTCTTGATATGTGATACTACACAAGAACTGT  689

seq1  ACTTTTTTGGTTTTGGTTTTGTTTGGGGGATATGTTGGGTTTTTTGTTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTGGTTTTGGTTTTGTTTGGGGGATATGTTGGGTTTTTTGTTGT  739

seq1  TTTGTTTTGTTTTTTATTTTGTTTTGGGGTGTTTGTTTTTTTTTGTTTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTTTATTTTGTTTTGGGGTGTTTGTTTTTTTTTGTTTGG  789

seq1  TTGGTTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTGT  839

seq1  TTGTTTGTTTTTTTTTTTTTTTTGAGACAAGGTTCCTCTGTATAGTCCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTTTTTTTTTTTTTGAGACAAGGTTCCTCTGTATAGTCCTG  889

seq1  ACTGTCCTGGAACTCACTCTGTAAACCATGCTGGCTCAAACTCAGAAATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTGGAACTCACTCTGTAAACCATGCTGGCTCAAACTCAGAAATT  939

seq1  TGCCTGACTCTGCCTTCCAAGTACTGGATTAAAGGGGATTAAAAGCATAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACTCTGCCTTCCAAGTACTGGATTAAAGGGGATTAAAAGCATAT  989

seq1  GCCGCCACTGCCAGGCAGAATTGTACATTTTTAGTAAGATCTTTAATGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCACTGCCAGGCAGAATTGTACATTTTTAGTAAGATCTTTAATGGA  1039

seq1  TTTGGTAGTGATACTGAATTC  1067
      |||||||||||||||||||||
seq2  TTTGGTAGTGATACTGAATTC  1060