BAC Information

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BAC

Clone NameB6Ng01-211H22
Chromosome1 (Build37)
Map Location 110,470,929 - 110,472,109
singlet/doubletsinglet
Overlap genenone
Upstream geneSerpinb8, LOC435640
Downstream geneEG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H22.bB6Ng01-211H22.g
ACCGA029549GA029550
length9881,166
definitionB6Ng01-211H22.b B6Ng01-211H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttgggcacttcagcttgttcagctttttgagttctgtgaa
atgtatcttgggtattctgtacttttttttcttttggctaatatacactt
attagtaagtacataccattcatgttcttttgggtctgagttacctcact
caggacaatattttctagttccatccatttgcctgcaaagctcagaatgc
cctcgttcttaatagttgagtagcattacattgtgtaaatgaactacatt
ttctgtatcaattcttctgtcgtgggacatctaggttgtttccagcttct
gactatcataaataaggcagctatgaacatagtggaagacgtgcccctgt
gctatggcaacttttgggtatattcctaagagtggtattgctgagtcttc
aggtagatctattttcaattttctgaataacctccagattgattttccaa
gtgattgtactagtttgcaatcctgtcagcaacagcagttttcctctttc
tccacatcctctgcaatatgtgttgtgacatgaggttttaatcttagaca
ttctgtatggtgtaaggtggaatctcagggtcattttgattttcattttt
ctaatcactaaagactttgaacatttctttacatgcttctcagccatttg
agattcctcagttgtgaatttttgttttagttctataccccacttttttg
gggagggtgttgtttggatttttggtgattttgagttctttatatatttt
ggatgttagccctctatcggatatggagttagtgaagatttttttttcac
aatctgtaggtttgccaatttgtccttgttgatttatatcttttacctta
caaagctttggcaggttcatgaggtctcattttatggaattctttgatct
agagcatgagcaattgggagttctggttctggaaattttcccccagtgcc
tatgagttcaagtgtctctttcccatctttctctcata

gaattcttaggtctcttttgggtacttagaatgaaattgctattaatctt
ttattttcagttcaaatagaaaaatctaggatgcatgtcgaattgttaac
agaaatcaacacttgattcaagcacatctaaatgacgatcagtcacaaat
catttttaaaggagcaaatttgccaataaaaccctatatagcataattat
tcatctgaatagaactattttaaattgtataattatttaattttgtattt
atgtatttgtttaagtttttttttcccctgagacatggtttctttctgtc
attctggctgtactggaactcaatcattagactaaatatctgcctgccat
tgcttcctgagtgctgagattaaatgtgtgtactattaccactgatcaca
caataattccactatgggaactgaattattatttgcttattttatgttta
tgtcttctctgtataagtttaaatttgagaaacagttttctcttggtctg
gcccgaaggttcagttcacaatggtattatttgccatacctgtcaatgta
agatttatcctggcgactcacatggtagaaggaaagaaccaattctaaca
atttttcctatcactgcatatgcatgctatggcacataaatgcccataga
aatgttcatgcaaacatacaactatctccgtatgcaaaaaaaaaaaaaac
tagaaaaatcaatttaaaattcatattggcaaattttaaatagacttcta
aatatagcacttaatctactaatgccgtaagagttaacagtgaatccaaa
tacccatttccgatctttttttatccatgtttattgtactatttcaatca
tgctattgcccacttgtatagtttcataaaatcccggctttataaaataa
tttacatctaggtaaaagtgctaacacattttaaggatagtttatatcta
gatctcaccattttaattcttatctgacattcaaaatagcatatgtttaa
aggttgtctcactaacgtgtttattattctggcattgtcagatagctgca
cgatttgcttatttagaatatttttgtgtactatcgtattagtgaattct
tgtatgggaaaataaatttctgagtactaagttcacaaaagtctattgag
tgtgagaacaactgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110470929_110472109
seq2: B6Ng01-211H22.g_64_1229

seq1  GAATTCTTAGGTCTCTTTTGGGTACTTAGAATGAAATTGCTATTAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGTCTCTTTTGGGTACTTAGAATGAAATTGCTATTAATCTT  50

seq1  TTATTTTCAGTTCAAATAGAAAAATCTAGGATGCATGTCGAATTGTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCAGTTCAAATAGAAAAATCTAGGATGCATGTCGAATTGTTAAC  100

seq1  AGAAATCAACACTTGATTCAAGCACATCTAAATGACGATCAGTCACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAACACTTGATTCAAGCACATCTAAATGACGATCAGTCACAAAT  150

seq1  CATTTTTAAAGGAGCAAATTTGCCAATAAAACCCTATATAGCATAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAAGGAGCAAATTTGCCAATAAAACCCTATATAGCATAATTAT  200

seq1  TCATCTGAATAGAACTATTTTAAATTGTATAATTATTTAATTTTGTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGAATAGAACTATTTTAAATTGTATAATTATTTAATTTTGTATTT  250

seq1  ATGTATTTGTTTAAGTTTTTTTTTCCCCTGAGACATGGTTTCTTTCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGTTTAAGTTTTTTTTTCCCCTGAGACATGGTTTCTTTCTGTC  300

seq1  ATTCTGGCTGTACTGGAACTCAATCATTAGACTAAATATCTGCCTGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCTGTACTGGAACTCAATCATTAGACTAAATATCTGCCTGCCAT  350

seq1  TGCTTCCTGAGTGCTGAGATTAAATGTGTGTACTATTACCACTGATCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTGAGTGCTGAGATTAAATGTGTGTACTATTACCACTGATCACA  400

seq1  CAATAATTCCACTATGGGAACTGAATTATTATTTGCTTATTTTATGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTCCACTATGGGAACTGAATTATTATTTGCTTATTTTATGTTTA  450

seq1  TGTCTTCTCTGTATAAGTTTAAATTTGAGAAACAGTTTTCTCTTGGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTCTGTATAAGTTTAAATTTGAGAAACAGTTTTCTCTTGGTCTG  500

seq1  GCCCGAAGGTTCAGTTCACAATGGTATTATTTGCCATACCTGTCAATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGAAGGTTCAGTTCACAATGGTATTATTTGCCATACCTGTCAATGTA  550

seq1  AGATTTATCCTGGCGACTCACATGGTAGAAGGAAAGAACCAATTCTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATCCTGGCGACTCACATGGTAGAAGGAAAGAACCAATTCTAACA  600

seq1  ATTTTTCCTATCACTGCATATGCATGCTATGGCACATAAATGCCCATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCTATCACTGCATATGCATGCTATGGCACATAAATGCCCATAGA  650

seq1  AATGTTCATGCAAACATACAACTATCTCCGTATGCAAAAAAAAAAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCATGCAAACATACAACTATCTCCGTATGCAAAAAAAAAAAAAAC  700

seq1  TAGAAAAATCAATTTAAAATTCATATTGGCAAATTTTAAATAGACTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATCAATTTAAAATTCATATTGGCAAATTTTAAATAGACTTCTA  750

seq1  AATATAGCACTTAATCTACTAATGCCGTAAGAGTTAACAGTGAATCCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCACTTAATCTACTAATGCCGTAAGAGTTAACAGTGAATCCAAA  800

seq1  TACCCATTTCCGATCTTTTTTTATCCATGTTTATTGTACTATTTCAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATTTCCGATCTTTTTTTATCCATGTTTATTGTACTATTTCAATCA  850

seq1  TGCTATTGCCCACTTGTATAGTTTCATAAAAT-CCGGCTTTATAAAATAA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCTATTGCCCACTTGTATAGTTTCATAAAATCCCGGCTTTATAAAATAA  900

seq1  TTTACATCTAGGTAAAAGTGCTAACACATTTTAAGGATAGTTTATATCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCTAGGTAAAAGTGCTAACACATTTTAAGGATAGTTTATATCTA  950

seq1  GATCTCACCATTTTAATTCTTATCCTGACATTCAAAAATAGCATATGTTT  999
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  GATCTCACCATTTTAATTCTTAT-CTGACATTC-AAAATAGCATATGTTT  998

seq1  AAAGGTTGTCCTCACCTAACGTGGTTTATTA-TCTGGCATTGTCCAGATA  1048
      ||||||||| |||| ||||||| |||||||| ||||||||||| ||||||
seq2  AAAGGTTGT-CTCA-CTAACGT-GTTTATTATTCTGGCATTGT-CAGATA  1044

seq1  GCTTGCCACCGATTTTGCTTATTTTAGAATATTTTTGTGGTACTATCGTA  1098
      || |||   ||| |||||||| |||||||||||||||| |||||||||||
seq2  GC-TGC--ACGA-TTTGCTTA-TTTAGAATATTTTTGT-GTACTATCGTA  1088

seq1  TTAGTTGAATC-TGTATGGGAAAATTAATATTCTGAGTACTAAGTCCCAA  1147
      |||||  | || ||||||||||||| ||| ||||||||||||||| |  |
seq2  TTAGTGAATTCTTGTATGGGAAAATAAAT-TTCTGAGTACTAAGTTC--A  1135

seq1  CAAGAAAGTTCTAATTGA-TGTGAGAACAACTGCT  1181
      ||  |||| ||| ||||| ||||||||||||||||
seq2  CA--AAAG-TCT-ATTGAGTGTGAGAACAACTGCT  1166


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