BAC Information

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BAC

Clone NameB6Ng01-212B17
Chromosome1 (Build37)
Map Location 97,102,427 - 97,103,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666012, LOC666025, LOC100040685
Downstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212B17.bB6Ng01-212B17.g
ACCGA029989GA029990
length1,2191,060
definitionB6Ng01-212B17.b B6Ng01-212B17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctcaaaatgtttgccatcacctttgcttcacaagtttgtttc
atttgtgttttcagttgagtagtgtctaccttctcttgcaggtgaagtat
cttccaaaggattttgaacttgctcctgataaaaacttaagtattcttgg
caaaatatctgaaatttctagtttctaaattcaaattattatttttaata
tatatttactagatattttcttcatttacatttcaaatgttatccccttt
cctagttacctctctgaaaatcccctatcccctcctccctctctctggtc
cccaacccacccactccagcttcctggccctggcatttccctatactggg
gcatagaatcttcccaagaccaagggcctctcctcccattgatggacggc
taggccatcctctcttacatatgcagctagagacaggagtcccattatgc
tttttctttgattggtggtttagtcccagggagctctgggggtacaggtt
agttcatattgttgttcctcctagggggctgcaaaccccttcagctcctt
gagtactttctttagatccttcgttgtggaccctgtgctccattcaataa
atgactgtgaagtgtgccatttatagaggatgtactatgtttttgttgct
ccaaaaatggtggctgctattcatggttatttagaagagaaaacagagtg
ttgaatattgaactccttccatcatttattagagctcttcaaaaaaaata
tgtagacctatttccacaatcatgtaattgttcaaattaaataactcaaa
tataggtaatcatcacacggatttttttttttaatcacagaacatacaag
ttcatcatgtacatctaattttcaaaataacaatcacatcaatttaatgt
gtgggaactaaagacattttttgatcaaaataaccttacatttaattttg
aaagattcagctctctgattgtaacagctttatgacttgaataaataggg
ataggctcttccttaagtcacatgagagatggtacaattatggaagaata
attttgtgtcacaatctgtgatacacaatgaaataaatttgggaatctat
atatctagaattatgaacggccgtaattatatcataaaatctatccaaat
cccaagtgctctaacgatgctcacaagagaaactcttaaaaagattttca
taaaacactccttttaatc
gaattcagtgaaaatgatgacacagcatatccaaacttatgggacacaat
gaaagcagtggtaagagcactcctgttgatgttgagagatataaaggacc
aatgattgctgatttctgttatttttgttgtgcgaggtggtactatgttt
ttgtagtttttttttgtagttatttttatgttatgagatgattaatttgt
tttttcttgggtgtagtttccctcctggtgatagagtttttcttttatta
ccctctgtagggctgaattcatggaaagatattgtttaaatttcgttttg
ttatggaatatcttggtttctctatggtgaatgagagttttgctgggtat
agtgataaacatgactcctagttgaggaatggggccacccacccatctcc
aaatctttaacccagaattgttcctatctaaaagaaattccaggggttgg
ggggaatggaacagagactgaaggaaaggccatccagagaccgttccacc
ttggatccatcccatctgcttacatcaaacaccgacactattgctgatac
caagaagagcttgcaggcaggaacctggtatagctgtcctctgagagcct
ctgccagcacatggcccacaaacttcacatctatatgttcacattatgtt
tccatattccagcaaccttctagatggattaatacaatttttaaattgaa
ctgttaaaggtgggagaatcaatcaaagaccttgtaccttgtattttagt
gtcaaaaaatgattttgcccactttactgttatctgaaaaggaaataaaa
atcatttctctttaattttagggactcttagctcgaaactcacctagtac
tgcaatgttctactttctcttctgcttcccagtgctattgatgtattttt
tgcttcagaaatttcataagcacagaaatagggtcattggggaaatgtgt
tagaaccatgaagatgagaatgtaatcatcaccagcatattggcttgaca
gaagttcaggtaagctgctacttctttttttgctcttccttactactacc
cactgcatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97102427_97103636
seq2: B6Ng01-212B17.b_45_1263

seq1  GAATTCCTCTCAAAATGTTTGCCATCACCTTTGCTTCACAAGTTTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAAAATGTTTGCCATCACCTTTGCTTCACAAGTTTGTTTC  50

seq1  ATTTGTGTTTTCAGTTGAGTAGTGTCTACCTTCTCTTGCAGGTGAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTTTCAGTTGAGTAGTGTCTACCTTCTCTTGCAGGTGAAGTAT  100

seq1  CTTCCAAAGGATTTTGAACTTGCTCCTGATAAAAACTTAAGTATTCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAAGGATTTTGAACTTGCTCCTGATAAAAACTTAAGTATTCTTGG  150

seq1  CAAAATATCTGAAATTTCTAGTTTCTAAATTCAAATTATTATTTTTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATCTGAAATTTCTAGTTTCTAAATTCAAATTATTATTTTTAATA  200

seq1  TATATTTACTAGATATTTTCTTCATTTACATTTCAAATGTTATCCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACTAGATATTTTCTTCATTTACATTTCAAATGTTATCCCCTTT  250

seq1  CCTAGTTACCTCTCTGAAAATCCCCTATCCCCTCCTCCCTCTCTCTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTACCTCTCTGAAAATCCCCTATCCCCTCCTCCCTCTCTCTGGTC  300

seq1  CCCAACCCACCCACTCCAGCTTCCTGGCCCTGGCATTTCCCTATACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCCACCCACTCCAGCTTCCTGGCCCTGGCATTTCCCTATACTGGG  350

seq1  GCATAGAATCTTCCCAAGACCAAGGGCCTCTCCTCCCATTGATGGACGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAATCTTCCCAAGACCAAGGGCCTCTCCTCCCATTGATGGACGGC  400

seq1  TAGGCCATCCTCTCTTACATATGCAGCTAGAGACAGGAGTCCCATTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATCCTCTCTTACATATGCAGCTAGAGACAGGAGTCCCATTATGC  450

seq1  TTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGCTCTGGGGGTACAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGCTCTGGGGGTACAGGTT  500

seq1  AGTTCATATTGTTGTTCCTCCTAGGGGGCTGCAAACCCCTTCAGCTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATATTGTTGTTCCTCCTAGGGGGCTGCAAACCCCTTCAGCTCCTT  550

seq1  GAGTACTTTCTTTAGATCCTTCGTTGTGGACCCTGTGCTCCATTCAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTCTTTAGATCCTTCGTTGTGGACCCTGTGCTCCATTCAATAA  600

seq1  ATGACTGTGAAGTGTGCCATTTATAGAGGATGTACTATGTTTTTGTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTGAAGTGTGCCATTTATAGAGGATGTACTATGTTTTTGTTGCT  650

seq1  CCAAAAATGGTGGCTGCTATTCATGGTTATTTAGAAGAGAAAACAGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAATGGTGGCTGCTATTCATGGTTATTTAGAAGAGAAAACAGAGTG  700

seq1  TTGAATATTGAACTCCTTCCATCATTTATTAGAGCTCTTCAAAAAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTGAACTCCTTCCATCATTTATTAGAGCTCTTCAAAAAAAATA  750

seq1  TGTAGACCTATTTCCACAATCATGTAATTGTTCAAATTAAATAACTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCTATTTCCACAATCATGTAATTGTTCAAATTAAATAACTCAAA  800

seq1  TATAGGTAATCATCACACGGATTTTTTTTTTTAATCACAGAACATACAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTAATCATCACACGGATTTTTTTTTTTAATCACAGAACATACAAG  850

seq1  TTCATCATGTACATCTAA-TTTCAAAATAACAATCACATCAATTTAATGT  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCATCATGTACATCTAATTTTCAAAATAACAATCACATCAATTTAATGT  900

seq1  GT-GGAACTAAAGACA-TTTTTGATC-AAATAACCTTACATTTTAATTTT  946
      || ||||||||||||| ||||||||| ||||||||||||| |||||||||
seq2  GTGGGAACTAAAGACATTTTTTGATCAAAATAACCTTACA-TTTAATTTT  949

seq1  GAAAGATTCAGCTCTCTGATTGTAACAGCTTTATGACTTGAATAATTAGG  996
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAGATTCAGCTCTCTGATTGTAACAGCTTTATGACTTGAATAAATAGG  999

seq1  GATAGGCTCTTCCTT-AGTCACATGAGAGAATGGTAC-ATTATGGAAGAT  1044
      ||||||||||||||| ||||||||||||| ||||||| ||||||||||| 
seq2  GATAGGCTCTTCCTTAAGTCACATGAGAG-ATGGTACAATTATGGAAGAA  1048

seq1  TATTTTGTTGTCACAATCTGTGATACAC-ATGAAATTAATTTTGGAATCT  1093
      || |||  |||||||||||||||||||| ||||||| ||||| |||||| 
seq2  TAATTTTGTGTCACAATCTGTGATACACAATGAAATAAATTTGGGAATC-  1097

seq1  TATATATCTAGATTTATG-ACAGCAGTAATTATAATCAT-AAATCTATCA  1141
      |||||||||||| ||||| || || |||||||| ||||| ||||||||| 
seq2  TATATATCTAGAATTATGAACGGCCGTAATTAT-ATCATAAAATCTATCC  1146

seq1  AATTCCAAAGTTGCTCTTACGATGCTCCACAGAG-AACTCT--AAAATAT  1188
      || ||| ||| |||||| |||||||||   |||| ||||||  |||| ||
seq2  AAATCCCAAG-TGCTCTAACGATGCTCACAAGAGAAACTCTTAAAAAGAT  1195

seq1  TTTCCTAAAACACTC--TTTAATC  1210
      |||| ||||||||||  |||||||
seq2  TTTCATAAAACACTCCTTTTAATC  1219