BAC Information

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BAC

Clone NameB6Ng01-212E14
Chromosome1 (Build37)
Map Location 71,193,031 - 71,193,421
singlet/doubletsinglet
Overlap genenone
Upstream geneSpag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1
Downstream geneLOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212E14.bB6Ng01-212E14.g
ACCGA030121GA030122
length1,225980
definitionB6Ng01-212E14.b B6Ng01-212E14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatttgattcaaataattttaggaagaaagttttttacatgg
ttttagttgttttgcctaaaagatgtaataaaattagaatcaggaataga
atttaccccctcctcataaagtaaaggctacataataaagaatacaatga
gctttcataattacactaaaaagaattatagacctgggacaaatttgtgt
tcaaagaaaaacactcaggtccaaggatgaagccacaggtgtgcactatg
ataagacaaggccatttaaaaactgttgctttgtttagcaaattgtatct
tatatcttgggtattctaagtttctgggctaatatacacttatcagtgag
tacatattgtgtgagttcttttgtgattgggttacctcactcaggatgat
gccctccaggtccatccatttgcctaggaatttcataaattcattgtttt
taatagctgagtactactccattgtgtagatgtaccacattttctatatc
cattcctctgttgaggggcatctgggttctttccagcttctggctattat
aaataaggctgctatgaacatagtggagcatgtgtccttcttaacagttg
gaacatcttctggatatatgcccaggagaggcattgcgggatcctccggt
agtactatgtccaattttctgaggaaccgccagactgatttccagagtgg
ttgtaccagcttgcaatcccaccaacaatggaggagtgttcctctttctt
cacatccttgccagcatctgctgtcacctgaatttttgatcctagccatt
ctgactggtgtgaggtggaatctcagggttgttttgatttgcatttccct
gatgattaaagatgttgaacatttttttttcaagtgcttctcagcccttc
ggtattcctcagttgagaattctttgtttagctctgtaccccatttttaa
tgaggttatttgaatttctggagttcagcatcttgagcaatcctcaccaa
catggaaggatacaatttgctaaacacatgaaactcaaaaagaacgagac
caaagtgtgaccactttggctccttcttagatggaacaaacactcaatga
gagtaagaagacacagtttgaactggaacgaaggatgacatctagagact
gccatatccggatcatctaatcaggctcaagcgtgataccatgcatacac
tataagaaattttgtctgaaaagca
gaattcacgaaattcctaggcaaatggttggacatggagggcatcatcct
gagtgaggtaacccaatcacaaaagaacacaaatgaaatgtactcactga
taagtggatattaacccagaaacttagtatagcgagatataaggtacaat
atgtaaaacatatgaaactgaagaagaacgaagaccaaagtgtggacact
ttgccccttcttagaattggaaacaatcacccatggaaggagttacagag
acatagtttggagctgagacaaaaggatggaccatctagagactgccata
tccagggatccatcccataattagcctccaagcgatgacaccattgcata
cactagcaagcctttgttgcaaggatggtgatatagctgtcccttgtgag
actatgccgtggcctagcaaacacagaagtggatgctcacagtcaactat
tggatggatcacagggcccccaatggaggagttagagaaaatacccaagg
agctaaagggaactgcaaccctataggtggaacaacattatatgaactaa
ccagtaccccagagctcttgactctagctgcatatgtatcaaaagatggc
ctagtcggccatcactggaaagagaggcccattggtcaggcaaacgttat
atgccccagtacaggggaatgccagggccaaaaaatgggaatggccacac
ccgagacccctttggacaatggccatattaatgctggacccctacaatct
cgtcactgggtttgctctttgctggaatgattctgagaactcaggagatg
acattaagtacacctattagtttataaagcattccgctcagaagtggcag
gatggtgggagtgggcagggtaaaggatgtgatatgtaggcggagcttcc
catctttctagtgctgtcatgcatgccacagctttaccaacctgaagctc
aacaaatcttactcggaaggattttgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71193031_71193421
seq2: B6Ng01-212E14.g_75_675 (reverse)

seq1  GCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTG  50

seq1  GGGTACTGGTTAGTTC--ATAATGTTGTTCCACCTATAGGGCTGCAGATC  98
      ||||||||||||||||  ||||||||||||||||||||||| ||||| ||
seq2  GGGTACTGGTTAGTTCATATAATGTTGTTCCACCTATAGGGTTGCAGTTC  100

seq1  CCTTTAGCTCCTTAGGTACTTTGTCTAGCTCCTCCATTGGGGGCCCTGTG  148
      ||||||||||||| |||| ||| |||| ||||||||||||||||||||||
seq2  CCTTTAGCTCCTTGGGTATTTTCTCTAACTCCTCCATTGGGGGCCCTGTG  150

seq1  ATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCC  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  ATCCATCCAATAGTTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCA  200

seq1  CGGGACATAGTCTCACAAGAGACAGCTATATATGGGCCCTTTCAGCAAAA  248
      |||  |||||||||||||| |||||||||||      |||| || |||| 
seq2  CGG--CATAGTCTCACAAGGGACAGCTATATCACCATCCTTGCAACAAAG  248

seq1  TCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAGGC------------  286
       ||||||||||||||||||||||||| || ||||||||            
seq2  GCTTGCTAGTGTATGCAATGGTGTCATCGCTTGGAGGCTAATTATGGGAT  298

seq1  --------------------------------------------------  286
                                                        
seq2  GGATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCT  348

seq1  --------------------------------------------------  286
                                                        
seq2  CCAAACTATGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTA  398

seq1  --------------------------------------------------  286
                                                        
seq2  AGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTCAGTTTCAT  448

seq1  ------------------------------------------------TG  288
                                                      | 
seq2  ATGTTTTACATATTGTACCTTATATCTCGCTATACTAAGTTTCTGGGTTA  498

seq1  ATATCCACTTATCAGTGAGTACATATAATTTGAGTTCTTTTGTGATTGGG  338
      |||||||||||||||||||||||| | ||||| |||||||||||||||||
seq2  ATATCCACTTATCAGTGAGTACATTTCATTTGTGTTCTTTTGTGATTGGG  548

seq1  TTACCTCACTCAAGATGATGCACTCCAGGTCCAAACATTTGCCTAGGAAT  388
      |||||||||||| |||||||| ||||| |||||| |||||||||||||||
seq2  TTACCTCACTCAGGATGATGCCCTCCATGTCCAACCATTTGCCTAGGAAT  598

seq1  TTC  391
      |||
seq2  TTC  601