BAC Information

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BAC

Clone NameB6Ng01-212F23
Chromosome1 (Build37)
Map Location 134,670,453 - 134,769,633
singlet/doubletdoublet
Overlap genenone
Upstream gene4732466D17Rik, Slc41a1, Rab7l1, Nucks1, Slc45a3, Elk4, Mfsd4, Pctk3, LOC100042221, Lemd1, EG638532, Klhdc8a, Nuak2, Tmcc2, Ripk5, Rbbp5, Tmem81, Cntn2, Nfasc
Downstream geneLrrn2, Mdm4, LOC638636, Pik3c2b, Ppp1r15b, Plekha6, Golt1a, Kiss1, LOC100038824, Ren1, Etnk2, Sox13, LOC667371, Snrpe, Zc3h11a, LOC667118, Lax1, Atp2b4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212F23.bB6Ng01-212F23.g
ACCGA030186GA030187
length1,121771
definitionB6Ng01-212F23.b B6Ng01-212F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,768,512 - 134,769,633)(134,670,453 - 134,671,220)
sequence
gaattccagcatctgtcttagggatctccaaagatcacatgtatagtctg
ttccttcagccactggatctactctaagtctttattcatatttatcccaa
tgttataaatttacatatgccaggagtgtgcagatcagggtctaagggac
taagtgtccttagagcaaaccgtgctgctgatggctgaattggctctgtc
tgaagtctcatccttagagacttaggggagactgaatgggtataagccac
tgggtccgtatgacccctgggactgccatactacagccttcctggttttg
ttctttctttttttttttttttaggatttatttatttattatatgtaagt
acactatagctgtcttcagatctgacaccaaaagagggtgtcagatctcg
taatggatggttctgagccatcatgtggttgctgggatttgaactcaaga
cctgggaaagagcagtgctcttaaccactgagtcatctctccagcctcca
gccttcctgttttagtaacccatccaacagtccaggcaagggttgagcga
gtgacacggagtttcctcaagttatcaagattgctaagtgcacagggaag
gggtgccttgaggagccatcctacacaggcaagatcccagaaggagtgcc
tgcctgctgagctgcccccatgcctgccttgcctcacctcagtctgagac
acctcagggcagcctgaggtgtgtagctagctgggtcctagatcctcacc
ctaagaccactgcctttgggcttgttatgctttttttcttcttttccctt
gaaagtgctcctgtctctcgtgacagagatcccacaattcccagagctgc
ctcaaaggaattaaagtggtaaagagtcagaagcgcatccttctatcaag
gtctgtattgctcctccttccttcacagttcatccccctggcctccttgc
tgggggtgagcaggggaaatgtacattcagctcagccactggccaccagc
tgctgctggtggcacctttggacttttctaagtgctctgcttcttttctt
tcagtacatggaaatggaaactctaagttctttggaaagctagtacgtta
atgtttttgcttggggccaca
gaattctctgcactttgtcaattccaggtggtagatatacagatatttat
tgggttcatttccagtgctctttctctgtgtatgaactagttcataatct
tgtcatttaaaaaaaaaaaagcaaaagaggctctcgttcttggggctatg
tggagaataggggcctcaagggtctagaaaagactctttaatgggagttc
ccacagacatggtgggatggtatagataaaggccttggcagtggacagga
aagacatgggctacctccaaagggtggcttcacacttggcaacctgctgg
gggagggcggaagagtggaaggctttgggcttaggatggtgtaggtgagg
cagggttgctaggcagaataggaagtaactgatgcctgctctgaagccca
tgggttgttttccatctgtgtttaaagccaaactgaagaatggacaggga
gctaaagtgggtaaagagaagaccatttcagaagagtgtggtatgagaag
aaacctaaggaggagcccaggagaagctcagaaacagggagtgtggcaag
tgtggcctctctaaaaggctccccctttgtagagccaactgccttttact
tctgatcctaagtttctcagtgaacctcacatttgcaggatgtcaaaaga
aatggtgttggcaccgttctactctctgacaaaataaacgctctggcagc
cacctaaaggagggacgaaagggttcatctcatttaaggtttcagaccct
caccagtccatcacgagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_134768512_134769633
seq2: B6Ng01-212F23.b_46_1166 (reverse)

seq1  TGTGTGCCCCAGCAAAACATTTAACGTAACTAGCTTTCCAAAGAACTAGA  50
      ||||  ||| |||||||   ||||||| |||||||||||||||||||   
seq2  TGTGGCCCCAAGCAAAAACATTAACGT-ACTAGCTTTCCAAAGAACTTAG  49

seq1  AGTTTCCATTTCCATGTACCTGAAGAAAAGAAGCAGAAGCCACTTTAGGA  100
      |||||||||||||||||||   |||||||||||||||   |||||   ||
seq2  AGTTTCCATTTCCATGTACTGAAAGAAAAGAAGCAGA--GCACTT--AGA  95

seq1  AAAGTCCCAAGGTGCCCACCAGCAGCAGCT-GTGGCCAGTGGCTG-GCTG  148
      ||||||| |||||| ||||||||||||||| |||||||||||||| ||||
seq2  AAAGTCCAAAGGTG-CCACCAGCAGCAGCTGGTGGCCAGTGGCTGAGCTG  144

seq1  -ATGTACATTTCCCCTGCTCACCCCCAGCAAGG-GGGCAGGGGGATGAAC  196
       |||||||||||||||||||||||||||||||| || |||||||||||||
seq2  AATGTACATTTCCCCTGCTCACCCCCAGCAAGGAGGCCAGGGGGATGAAC  194

seq1  TGTGAAGGGAGGAGGAGCAATACAGACC-TGATAGAAGGATGCGCTTCTG  245
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  TGTGAAGGAAGGAGGAGCAATACAGACCTTGATAGAAGGATGCGCTTCTG  244

seq1  ACTCTTTACCACTTTAATTCCTTTGAGGCAGCTCTGGGAATTGTGGGATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTACCACTTTAATTCCTTTGAGGCAGCTCTGGGAATTGTGGGATC  294

seq1  TCTGTCACGAGAGACAGGAGCACTTTCAAGGGAAAAGAAGAAAAAAAGCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACGAGAGACAGGAGCACTTTCAAGGGAAAAGAAGAAAAAAAGCA  344

seq1  TAACAAGCCCAAAGGCAGTGGTCTTAGGGTGAGGATCTAGGACCCAGCTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGCCCAAAGGCAGTGGTCTTAGGGTGAGGATCTAGGACCCAGCTA  394

seq1  GCTACACACCTCAGGCTGCCCTGAGGTGTCTCAGACTGAGGTGAGGCAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACACCTCAGGCTGCCCTGAGGTGTCTCAGACTGAGGTGAGGCAAG  444

seq1  GCAGGCATGGGGGCAGCTCAGCAGGCAGGCACTCCTTCTGGGATCTTGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCATGGGGGCAGCTCAGCAGGCAGGCACTCCTTCTGGGATCTTGCC  494

seq1  TGTGTAGGATGGCTCCTCAAGGCACCCCTTCCCTGTGCACTTAGCAATCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGATGGCTCCTCAAGGCACCCCTTCCCTGTGCACTTAGCAATCT  544

seq1  TGATAACTTGAGGAAACTCCGTGTCACTCGCTCAACCCTTGCCTGGACTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTTGAGGAAACTCCGTGTCACTCGCTCAACCCTTGCCTGGACTG  594

seq1  TTGGATGGGTTACTAAAACAGGAAGGCTGGAGGCTGGAGAGATGACTCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGGTTACTAAAACAGGAAGGCTGGAGGCTGGAGAGATGACTCAG  644

seq1  TGGTTAAGAGCACTGCTCTTTCCCAGGTCTTGAGTTCAAATCCCAGCAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGAGCACTGCTCTTTCCCAGGTCTTGAGTTCAAATCCCAGCAAC  694

seq1  CACATGATGGCTCAGAACCATCCATTACGAGATCTGACACCCTCTTTTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATGGCTCAGAACCATCCATTACGAGATCTGACACCCTCTTTTGG  744

seq1  TGTCAGATCTGAAGACAGCTATAGTGTACTTACATATAATAAATAAATAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATCTGAAGACAGCTATAGTGTACTTACATATAATAAATAAATAA  794

seq1  ATCCTAAAAAAAAAAAAAAAGAAAGAACAAAACCAGGAAGGCTGTAGTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAAAAAAAAAAAAAAGAAAGAACAAAACCAGGAAGGCTGTAGTAT  844

seq1  GGCAGTCCCAGGGGTCATACGGACCCAGTGGCTTATACCCATTCAGTCTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCCCAGGGGTCATACGGACCCAGTGGCTTATACCCATTCAGTCTC  894

seq1  CCCTAAGTCTCTAAGGATGAGACTTCAGACAGAGCCAATTCAGCCATCAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGTCTCTAAGGATGAGACTTCAGACAGAGCCAATTCAGCCATCAG  944

seq1  CAGCACGGTTTGCTCTAAGGACACTTAGTCCCTTAGACCCTGATCTGCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACGGTTTGCTCTAAGGACACTTAGTCCCTTAGACCCTGATCTGCAC  994

seq1  ACTCCTGGCATATGTAAATTTATAACATTGGGATAAATATGAATAAAGAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGCATATGTAAATTTATAACATTGGGATAAATATGAATAAAGAC  1044

seq1  TTAGAGTAGATCCAGTGGCTGAAGGAACAGACTATACATGTGATCTTTGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTAGATCCAGTGGCTGAAGGAACAGACTATACATGTGATCTTTGG  1094

seq1  AGATCCCTAAGACAGATGCTGGAATTC  1122
      |||||||||||||||||||||||||||
seq2  AGATCCCTAAGACAGATGCTGGAATTC  1121

seq1: chr1_134670453_134671220
seq2: B6Ng01-212F23.g_70_840

seq1  GAATTCTCTGCACTTTGTCAATTCCAGGTGGTAGATATACAGATATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCACTTTGTCAATTCCAGGTGGTAGATATACAGATATTTAT  50

seq1  TGGGTTCATTTCCAGTGCTCTTTCTCTGTGTATGAACTAGTTCATAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCATTTCCAGTGCTCTTTCTCTGTGTATGAACTAGTTCATAATCT  100

seq1  TGTCATTTAAAAAAAAAAAAGCAAAAGAGGCTCTCGTTCTTGGGGCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTAAAAAAAAAAAAGCAAAAGAGGCTCTCGTTCTTGGGGCTATG  150

seq1  TGGAGAATAGGGGCCTCAAGGGTCTAGAAAAGACTCTTTAATGGGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATAGGGGCCTCAAGGGTCTAGAAAAGACTCTTTAATGGGAGTTC  200

seq1  CCACAGACATGGTGGGATGGTATAGATAAAGGCCTTGGCAGTGGACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACATGGTGGGATGGTATAGATAAAGGCCTTGGCAGTGGACAGGA  250

seq1  AAGACATGGGCTACCTCCAAAGGGTGGCTTCACACTTGGCAACCTGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGGGCTACCTCCAAAGGGTGGCTTCACACTTGGCAACCTGCTGG  300

seq1  GGGAGGGCGGAAGAGTGGAAGGCTTTGGGCTTAGGATGGTGTAGGTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCGGAAGAGTGGAAGGCTTTGGGCTTAGGATGGTGTAGGTGAGG  350

seq1  CAGGGTTGCTAGGCAGAATAGGAAGTAACTGATGCCTGCTCTGAAGCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGCTAGGCAGAATAGGAAGTAACTGATGCCTGCTCTGAAGCCCA  400

seq1  TGGGTTGTTTTCCATCTGTGTTTAAAGCCAAACTGAAGAATGGACAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTTTTCCATCTGTGTTTAAAGCCAAACTGAAGAATGGACAGGGA  450

seq1  GCTAAAGTGGGTAAAGAGAAGACCATTTCAGAAGAGTGTGGTATGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGTGGGTAAAGAGAAGACCATTTCAGAAGAGTGTGGTATGAGAAG  500

seq1  AAACCTAAGGAGGAGCCCAGGAGAAGCTCAGAAACAGGGAGTGTGGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAAGGAGGAGCCCAGGAGAAGCTCAGAAACAGGGAGTGTGGCAAG  550

seq1  TGTGGCCTCTCTAAAAGGCTCCCCCTTTGTAGAGCCAACTGCCTTTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTCTCTAAAAGGCTCCCCCTTTGTAGAGCCAACTGCCTTTTACT  600

seq1  TCTGATCCTAAGTTTCTCAGTGAACCTCACATTTGCAGGATGTCAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCTAAGTTTCTCAGTGAACCTCACATTTGCAGGATGTCAAAAGA  650

seq1  AATGGTGTTGGCACCGTTCTACTCTCTGAC-AAATAAACGC-CTGGCAGC  698
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  AATGGTGTTGGCACCGTTCTACTCTCTGACAAAATAAACGCTCTGGCAGC  700

seq1  CACCTAAAGGAGGGACGAAAGGGTTCATCTCATTTAAGGTTTCAGA-CCT  747
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACCTAAAGGAGGGACGAAAGGGTTCATCTCATTTAAGGTTTCAGACCCT  750

seq1  CACCAGTCCATCACGAGGGTA  768
      |||||||||||||||||||||
seq2  CACCAGTCCATCACGAGGGTA  771