BAC Information

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BAC

Clone NameB6Ng01-213P09
Chromosome1 (Build37)
Map Location 183,545,817 - 183,546,868
singlet/doubletsinglet
Overlap genenone
Upstream geneLin9, Mixl1, LOC666431, Acbd3, H3f3a, BC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26, LOC100042363, LOC666519, Cnih3, Ccdc121
Downstream geneA230079K17Rik, Lbr, EG433384, Enah, Srp9, EG625823, Degs1, 1700047M11Rik, Fbxo28, LOC435657, ENSMUSG00000073482, Trp53bp2, Capn2, LOC666624, Capn8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213P09.b
ACCGA031340
length1,067
definitionB6Ng01-213P09.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaatctgagagaaaacaatacataagagtacattcaaggga
tcgcagtacccaacagaacacagatgcttataaaatggtcaatacgtact
tattatagaagcgttcttgatcagactcaagctggagtcctgagtctatt
cgaatttattgaaacaaagacaaagtaaaaatttattaacagtttaaaat
gcaagacaacaacttaatatatatcagtattttctaaataacctgagaat
caatcgctgagcctgtctggaaggggaattccagaatcatatcccagact
ctgataggacacctggagcagagtcccagactgtgttcttttcctttcct
gtgggcctcacatacgctaggcacatattctaccaccaggtggcactcct
gggcttttagcagccgttctaggtgccactcatcctgaaaatgaaagccc
agaaggccagagtgacagtgtaagtggttcacagtgaatgatattaccac
tcgcatgtaccacaaggtagttcgtggtctgtcattgctccccttagcaa
gtatgctaacgtggcataactaacaaacatggcataatcctaaatttctt
tccttactaccagctgccacccgctgcctccggcctcacctgaaaggatg
cgtttcaggagggtgccaaacttgctcggctggttgtactggctgagcat
ggcttcacttgaagttcttttttcggttctccagttcctcctcatcacac
accagagactctttcacagttctcagacttctgattattctccttccagg
tcctctggagagttcattcatagtgggaagtctcagacagaggctgatct
tcaaatattggagcatatggttttcttcaaatctcattgccacacgatga
ctgttaaaagtctaaggtagccaaatgtgctcacaaggcaaggaccaaca
tacaatagaacgggtttacctggtggtgataaaaggttaggtagatccaa
aaaccgtaactcatattttacatgtcaaaaaagaatgaaatgtgaaatta
gatttagtgggccattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_183545817_183546868
seq2: B6Ng01-213P09.b_40_1106 (reverse)

seq1  AAATTGCCCACTAATACTAATTTCACATTTCA-TCTTTTTTGACATGT-A  48
      |||| |||||||||  |||||||||||||||| ||||||||||||||| |
seq2  AAATGGCCCACTAAATCTAATTTCACATTTCATTCTTTTTTGACATGTAA  50

seq1  AATATG-GTTACAGTTTATGATACTACCTAACC-TTTATCACCACCAGTT  96
      |||||| ||||| |||| ||   |||||||||| |||||||||||||| |
seq2  AATATGAGTTACGGTTTTTGGATCTACCTAACCTTTTATCACCACCAGGT  100

seq1  AA--CCGTTCTATTGTATGTT-GTTCTTGCCTTGTGGGCACATTT-GCTA  142
      ||  ||||||||||||||||| || ||||||||||| |||||||| ||||
seq2  AAACCCGTTCTATTGTATGTTGGTCCTTGCCTTGTGAGCACATTTGGCTA  150

seq1  CCTTAGACTTTTAACAGTCATCGTGTGGCAATG-GATTTGAAGAAAACC-  190
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  CCTTAGACTTTTAACAGTCATCGTGTGGCAATGAGATTTGAAGAAAACCA  200

seq1  TATGCTCCAATATTTG-AGATCAGCCTCTGTCTGAGACTTCCCACTATGA  239
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATGCTCCAATATTTGAAGATCAGCCTCTGTCTGAGACTTCCCACTATGA  250

seq1  ATG-ACTCTCCAGAGGACCTGGAAGG-GAATAATCAGAAGTCTGAGAACT  287
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGAACTCTCCAGAGGACCTGGAAGGAGAATAATCAGAAGTCTGAGAACT  300

seq1  GTG-AAGAGTCTCTGGTGTGTGATGAGGAGGAACTGGAGAACCG-AAAAA  335
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGAAAGAGTCTCTGGTGTGTGATGAGGAGGAACTGGAGAACCGAAAAAA  350

seq1  GAACTTCAAGTGAAGCCATGCTCAGCCAGTACAACCAGCCGAGCAAGTTT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAAGTGAAGCCATGCTCAGCCAGTACAACCAGCCGAGCAAGTTT  400

seq1  GGCACCCTCCTGAAACGCATCCTTTCAGGTGAGGCCGGAGGCAGCGGGTG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCTCCTGAAACGCATCCTTTCAGGTGAGGCCGGAGGCAGCGGGTG  450

seq1  GCAGCTGGTAGTAAGGAAAGAAATTTAGGATTATGCCATGTTTGTTAGTT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGTAGTAAGGAAAGAAATTTAGGATTATGCCATGTTTGTTAGTT  500

seq1  ATGCCACGTTAGCATACTTGCTAAGGGGAGCAATGACAGACCACGAACTA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACGTTAGCATACTTGCTAAGGGGAGCAATGACAGACCACGAACTA  550

seq1  CCTTGTGGTACATGCGAGTGGTAATATCATTCACTGTGAACCACTTACAC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGTACATGCGAGTGGTAATATCATTCACTGTGAACCACTTACAC  600

seq1  TGTCACTCTGGCCTTCTGGGCTTTCATTTTCAGGATGAGTGGCACCTAGA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCTGGCCTTCTGGGCTTTCATTTTCAGGATGAGTGGCACCTAGA  650

seq1  ACGGCTGCTAAAAGCCCAGGAGTGCCACCTGGTGGTAGAATATGTGCCTA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTGCTAAAAGCCCAGGAGTGCCACCTGGTGGTAGAATATGTGCCTA  700

seq1  GCGTATGTGAGGCCCACAGGAAAGGAAAAGAACACAGTCTGGGACTCTGC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATGTGAGGCCCACAGGAAAGGAAAAGAACACAGTCTGGGACTCTGC  750

seq1  TCCAGGTGTCCTATCAGAGTCTGGGATATGATTCTGGAATTCCCCTTCCA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGTCCTATCAGAGTCTGGGATATGATTCTGGAATTCCCCTTCCA  800

seq1  GACAGGCTCAGCGATTGATTCTCAGGTTATTTAGAAAATACTGATATATA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTCAGCGATTGATTCTCAGGTTATTTAGAAAATACTGATATATA  850

seq1  TTAAGTTGTTGTCTTGCATTTTAAACTGTTAATAAATTTTTACTTTGTCT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGTTGTCTTGCATTTTAAACTGTTAATAAATTTTTACTTTGTCT  900

seq1  TTGTTTCAATAAATTCGAATAGACTCAGGACTCCAGCTTGAGTCTGATCA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCAATAAATTCGAATAGACTCAGGACTCCAGCTTGAGTCTGATCA  950

seq1  AGAACGCTTCTATAATAAGTACGTATTGACCATTTTATAAGCATCTGTGT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGCTTCTATAATAAGTACGTATTGACCATTTTATAAGCATCTGTGT  1000

seq1  TCTGTTGGGTACTGCGATCCCTTGAATGTACTCTTATGTATTGTTTTCTC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGGTACTGCGATCCCTTGAATGTACTCTTATGTATTGTTTTCTC  1050

seq1  TCAGATTTTTTGAATTC  1052
      |||||||||||||||||
seq2  TCAGATTTTTTGAATTC  1067