BAC Information

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BAC

Clone NameB6Ng01-217M22
Chromosome1 (Build37)
Map Location 64,786,693 - 64,787,116
singlet/doubletsinglet
Overlap genenone
Upstream geneFastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5
Downstream gene9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217M22.g
ACCGA034109
length1,013
definitionB6Ng01-217M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaactctgagtcccattttttgtagggttatttggttt
cctggagtccaagttcttgagttctttatatatatattgtatattaaccc
cctactggatcccagatttgtacagatcttttcccaattgaactggttgc
cttttggtattattgacaccgccttttgccttacctaaactttgacattt
atgaggtcccatttgtcaatacttgatcttacaccccaacccgttgctgt
tctgttcaagaatcttttccctgaccccatatcttcgaggctctgcccca
ctttctcctctataagtttcagtgtctctggtattatatggagttctttg
ttccacttagacttgagctcagtacaaggagataagaatggatcaatttg
catttgtctccaagcaaactgcctgttaagccagcaccatttgttaaata
tgccgacttttttcccactggttttagctcctttgtccaactcctagtga
cttcaggtgtgtgggttcacttctgggtcttctattctattccattgatc
tacatgtttgtcactgtaccagatccatgcacggattagtttttttaaag
ttgctgagtacatgacatacctcatgcaggctgctaaatattttgcctcg
ataacgcgtggaatgatcttatacagaaactgtcaccagaacaactcatt
gggtttattgggtgtaactaggtccacaaaaagggtagcaatcgatattc
ttatacttcattattattacagttaataacatgcggtacaattgtaaatt
actaagagtagactttaagtgttccttatcacaacacacacaaagattag
gtatgtggggctagaaattgccactcatttagttacctatcgaacacaaa
gacccaggtcaattccctagtaccacctataactacgcattgtcctcctg
ccctataatcccaggattgaagaggtggtgccttggaaggcaaatgttca
aagttcatccatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64786693_64787116
seq2: B6Ng01-217M22.g_652_1078

seq1  TAGTTTTTTTAAAGTATGCTGAGTACTTAACATACCTCAGGCAGGCTGCT  50
      ||||||||||||||| |||||||||| | |||||||||| ||||||||||
seq2  TAGTTTTTTTAAAGT-TGCTGAGTACATGACATACCTCATGCAGGCTGCT  49

seq1  AAATATTTTGCCTCGTTTAATGCTTGGAATAATCATATACAGAAACTGTC  100
      |||||||||||||||  ||| || |||||| ||| |||||||||||||||
seq2  AAATATTTTGCCTCG-ATAACGCGTGGAATGATCTTATACAGAAACTGTC  98

seq1  ACCAGAACAACTCATTGGGTTTATTGGGTGTAACTA-GTCCACAAAAAGG  149
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACCAGAACAACTCATTGGGTTTATTGGGTGTAACTAGGTCCACAAAAAGG  148

seq1  GTAGCAGTCGATATTTCTTATACTTCATTATTATTACAGTTAATAACAAT  199
      |||||| |||||| ||||||||||||||||||||||||||||||||| ||
seq2  GTAGCAATCGATA-TTCTTATACTTCATTATTATTACAGTTAATAAC-AT  196

seq1  GCGGTACAATTGTAAATTACTAAGAGTAGACTTTAAGTGTT-CTTATCAC  248
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCGGTACAATTGTAAATTACTAAGAGTAGACTTTAAGTGTTCCTTATCAC  246

seq1  AACACACACAAAGA-TAAGTATGT-GGGCTAGAAA-TGCAACTCATTTAG  295
      |||||||||||||| || |||||| |||||||||| ||| ||||||||||
seq2  AACACACACAAAGATTAGGTATGTGGGGCTAGAAATTGCCACTCATTTAG  296

seq1  TTACCTATCGAACACAAAGACCCAGGTTCAATTCCC-AATACCACCTAAA  344
      |||||||||||||||||||||||||| ||||||||| | ||||||||| |
seq2  TTACCTATCGAACACAAAGACCCAGG-TCAATTCCCTAGTACCACCTATA  345

seq1  ACTAGGCATTGTCCTCATG-CCTATAATCCCAGGATTTAAGAGGTGGGGC  393
      |||| ||||||||||| || ||||||||||||||||| ||||||||| ||
seq2  ACTACGCATTGTCCTCCTGCCCTATAATCCCAGGATTGAAGAGGTGGTGC  395

seq1  C-TGGAAGGTCAGAAGTTCAAAG-TCATCCATC  424
      | ||||||| || | |||||||| |||||||||
seq2  CTTGGAAGG-CAAATGTTCAAAGTTCATCCATC  427