BAC Information

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BAC

Clone NameB6Ng01-219H07
Chromosome1 (Build37)
Map Location 94,582,902 - 94,584,067
singlet/doubletsinglet
Overlap genenone
Upstream geneTwist2, Hdac4, LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos
Downstream geneGpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25, Bok
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219H07.g
ACCGA035289
length1,155
definitionB6Ng01-219H07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccctcacctgtgccatgtgtaacacagcttgtgtgggaaagcc
cagaagttacaaaggagagagatgcagctgctatagcaatggcccacaaa
gggccatgagccttgggttcctgtgttttcatcctcattccttcctggcc
ctctagttagcacactcactctcaagcacgctataacaggaatctctctg
gcgggggcctccatattaacagttgtaaaaactaacaaaccaacaaaaaa
cagagacttattcccctctggtgtctctttgcttttctcttcttcctctt
cttttgcccaccatattcaacctttgtctagctggttctgtgtgccttga
agccttgtaggactctgactagatgtatattcccacctcagtggtctacc
ttctcctggactgctgccagctgtcagccttgcaacacacaccttgtcac
cttctgtctatctatctgctttgggacagagcttgggacacagtaggagc
tcaatggctaggtgaatctgggacatgggggctcaaaaagcactttccta
ctatgtgaatgccaggagccatagagaagggatgggatggcgggttacct
tgttcactgcggtgacaaaatgcctaacgaggtgtgatttatgtgcagaa
aggtttatttcagcttgtagtttgaggagagagattaactgtatttttgc
ctcttccatgcaatgctgggcacatatccactgccctttctgaagaagca
gtgatcagcacgcagatgcattctctctcagcaaagtaaatacagatgta
agaggctgtgtcgggcagctcctccgcaccgctgctgtccccagggacga
gcagcttatggctggctactcacacctcccacctcgctctgtgtttgtca
aagacgcacacacttttccctggagaaggtctgcttttgccacaatgaca
tcaccggaattgtgtgggtcagccatttcaaatgttggttttctcccagt
tgtctggagattatgcctgagagtcagaagacttttcctctcaccccccc
tcagcatccacctgccaccttaataaaaataaatgcctgaccgctgttgc
tgctgagaggatcacgtttactgttagaatacagcggggccatcagtcaa
ctctg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94582902_94584067
seq2: B6Ng01-219H07.g_66_1220

seq1  GAATTCTCCCTCACCTGTGCCATGTGTAACACAGCTTGTGTGGGAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTCACCTGTGCCATGTGTAACACAGCTTGTGTGGGAAAGCC  50

seq1  CAGAAGTTACAAAGGAGAGAGATGCAGCTGCTATAGCAATGGCCCACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTACAAAGGAGAGAGATGCAGCTGCTATAGCAATGGCCCACAAA  100

seq1  GGGCCATGAGCCTTGGGTTCCTGTGTTTTCATCCTCATTCCTTCCTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATGAGCCTTGGGTTCCTGTGTTTTCATCCTCATTCCTTCCTGGCC  150

seq1  CTCTAGTTAGCACACTCACTCTCAAGCACGCTATAACAGGAATCTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTTAGCACACTCACTCTCAAGCACGCTATAACAGGAATCTCTCTG  200

seq1  GCGGGGGCCTCCATATTAACAGTTGTAAAAACTAACAAACCAACAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGCCTCCATATTAACAGTTGTAAAAACTAACAAACCAACAAAAAA  250

seq1  CAGAGACTTATTCCCCTCTGGTGTCTCTTTGCTTTTCTCTTCTTCCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTTATTCCCCTCTGGTGTCTCTTTGCTTTTCTCTTCTTCCTCTT  300

seq1  CTTTTGCCCACCATATTCAACCTTTGTCTAGCTGGTTCTGTGTGCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCCCACCATATTCAACCTTTGTCTAGCTGGTTCTGTGTGCCTTGA  350

seq1  AGCCTTGTAGGACTCTGACTAGATGTATATTCCCACCTCAGTGGTCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTAGGACTCTGACTAGATGTATATTCCCACCTCAGTGGTCTACC  400

seq1  TTCTCCTGGACTGCTGCCAGCTGTCAGCCTTGCAACACACACCTTGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGGACTGCTGCCAGCTGTCAGCCTTGCAACACACACCTTGTCAC  450

seq1  CTTCTGTCTATCTATCTGCTTTGGGACAGAGCTTGGGACACAGTAGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCTATCTATCTGCTTTGGGACAGAGCTTGGGACACAGTAGGAGC  500

seq1  TCAATGGCTAGGTGAATCTGGGACATGGGGGCTCAAAAAGCACTTTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCTAGGTGAATCTGGGACATGGGGGCTCAAAAAGCACTTTCCTA  550

seq1  CTATGTGAATGCCAGGAGCCATAGAGAAGGGATGGGATGGCGGGTTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGAATGCCAGGAGCCATAGAGAAGGGATGGGATGGCGGGTTACCT  600

seq1  TGTTCACTGCGGTGACAAAATGCCTAACGAGGTGTGATTTATGTGCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTGCGGTGACAAAATGCCTAACGAGGTGTGATTTATGTGCAGAA  650

seq1  AGGTTTATTTCAGCTTGTAGTTTGAGGAGAGAGATTAACTGTATTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTTCAGCTTGTAGTTTGAGGAGAGAGATTAACTGTATTTTTGC  700

seq1  CTCTTCCATGCAATGCTGGGCACATATCCACTGCCCTTTCTGAAGAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCATGCAATGCTGGGCACATATCCACTGCCCTTTCTGAAGAAGCA  750

seq1  GTGATCAGCACGCAGATGCATTCTCTCTCAGCAAAGTAAATACAGATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGCACGCAGATGCATTCTCTCTCAGCAAAGTAAATACAGATGTA  800

seq1  AGAGGCTGTGTCGGGCAGCTCCTCCGCACCGCTGCTGTCCCCAGGGACGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGTGTCGGGCAGCTCCTCCGCACCGCTGCTGTCCCCAGGGACGA  850

seq1  GCAGCTTATGGCTGGCTACTCACACCTCCCACCTCGCTCTGTGTTTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTATGGCTGGCTACTCACACCTCCCACCTCGCTCTGTGTTTGTCA  900

seq1  AAGACGCACACACTTTTCCCTGGAGAAGGTCTGCTTTTTGCCACAATGAC  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGACGCACACACTTTTCCCTGGAGAAGGTCTGC-TTTTGCCACAATGAC  949

seq1  ATCACCGGGAATGTGTGGGTCAGCCATTTTCAAATGTTTGGTTTCTCCCA  1000
      |||||||| | ||||||||||||||| ||||||||||| | |||||||||
seq2  ATCACCGGAATTGTGTGGGTCAGCCA-TTTCAAATGTTGGTTTTCTCCCA  998

seq1  G-TGTCTGGAGATTATTGCCTTGAGGAGTCAGGAGACTTTT-CTCTCA-C  1047
      | ||||||||||||| |||| ||| ||||||| |||||||| |||||| |
seq2  GTTGTCTGGAGATTA-TGCC-TGA-GAGTCAGAAGACTTTTCCTCTCACC  1045

seq1  CCCCCTCAGCAATTCCAACCTGCAAC--TTATAAAAATAAATGCGTGAAC  1095
      |||||||||||  ||| |||||| ||  | |||||||||||||| || ||
seq2  CCCCCTCAGCA--TCC-ACCTGCCACCTTAATAAAAATAAATGCCTG-AC  1091

seq1  CGCTGGTGCTGGGCTGAGAGGGATCACGTTTACTTGTTAAGATTTACAGC  1145
      ||||| ||||  ||||||| ||||||||||||| |||||  |  ||||||
seq2  CGCTGTTGCT--GCTGAGA-GGATCACGTTTAC-TGTTAGAA--TACAGC  1135

seq1  GGGGGCCATCAGTCAACTCTG  1166
       ||||||||||||||||||||
seq2  -GGGGCCATCAGTCAACTCTG  1155