BAC Information

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BAC

Clone NameB6Ng01-219I16
Chromosome1 (Build37)
Map Location 76,405,101 - 76,405,987
singlet/doubletsinglet
Overlap genenone
Upstream geneSpeg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream geneLOC100039137, Tfdp1-ps, Epha4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219I16.bB6Ng01-219I16.g
ACCGA035345GA035346
length1,238895
definitionB6Ng01-219I16.b B6Ng01-219I16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattagcttttcttaatttggattctgggggtaaaaataagatcc
tagtacttgccttgtaagcactttcccaataaaaccctctccctagcccc
taatttatactttatttttctttaaaaaaattttaaaagttcatctctat
ttttattggacattttatttacattttacatgttatccctttcccgattt
ctgacccccctcccagaaattcctatccccccttctcctgcttctatgag
tgtcccccccacacacacacacacgctcctgcctccccactctgtcattc
tcctacactggggctttgagccttcacagtagcaagggcctcttctccca
ttgatgcccgacaaggccattctctgttacatatatggctggagccatgg
gtgcctccatgtgtactccttggctggttgtttagaccctgggagccctg
gttgattgatattgttcttcttccaatggggttgcaaaccccttcagttc
cttcagtctttctctaattcctcagttttggaccctgtgctcagtccaat
ggttggttgtaagcatctacctctgtatttgtcaggctctggcagagact
ctcaggagacagctatagcagggtcctgtcaggatgcacttcttggcatc
cacaatagtgtctgagtttgatgactgtatatgggatggatcctcaggtg
gggcagtctctggatggcctttccttcagtctttgctccatactttgtcc
tggtatttcctcctgtgagtattttgttatcacttctaagaaggactgca
gcacccacactttggtcttccttcttcttgagcttcaagtggtctgtgaa
tcgtatcttaggtattccaagttttgggctaatatccacttaccagtgaa
tgcataccatgtgtgttctttctgtgattgggttacttcactcaggatga
tattttctagctccatctatttgcctaagaatttcttgcagtcatgtttc
tctgtgtagctctggctgtcctggagtcacctctgtagaccagctggctt
cgaacctcagaaaattctgcctgcctcttgccttccgagtgctgggatta
aagacatgtgcccacccacacccaactggaaggtcacttgggcttttaat
agcctgaagtatgcacctccaatttgacatttgtggtaaatatccaaatt
tctgatgatccatctctctctggttgtaagagcgaact
gaattctgtaattagggactggttctgagacagtgtttctcataatgaag
gagagactgtagtgcccctgtatctctcaaggatctctgtgcataggaaa
gaaccttttacccatgccccccaaatagcaaattctgctattatgctaag
tccagaagaaggggcatgtgggataaggtatttgcctccaactggcaatg
tgtgtgaggcagctggggttgggctgaattgtggtaatggtgatggttat
gccggcaatagtgagggaaggggacacattatatctgggaatttctcaag
ggagagaagggcatctacactgagcttcactgaggacattcctagggtga
tttgggggatccctgctcccttagcccctgtccagtgttcttttctacat
cccctcctccccttttcttactctaggcttattgctgcccttggtttgta
atttttttattagatttttttctttatttgcatttcaaatgttatcccct
ttcctggtttcccctctgaaaacccactatcccctccctcctcccccttc
tcatcaacctacccactcctgcttcctggccctggcattcccctatactg
gtgcatagaagcttcacaggaccaagggcctcccctctcattgatgacca
acaatgccatcctcttctacatatgcggctggagccatgagtcccaccat
gtgtactctttggttggtgggttttagtcccttgggagctctggaggtac
tggttagttcatggtttgtaaatttgtaattccctctgaacagtgaaggc
cttggcaaggtaattgaatgttgaagacagttacacatttttagaagcat
tctagatatgtacaaagaaattctacaatgtgaattaagactatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76405101_76405987
seq2: B6Ng01-219I16.g_70_964

seq1  GAATTCTGTAATTAGGGACTGGTTCTGAGACAGTGTTTCTCATAATGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATTAGGGACTGGTTCTGAGACAGTGTTTCTCATAATGAAG  50

seq1  GAGAGACTGTAGTGCCCCTGTATCTCTCAAGGATCTCTGTGCATAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACTGTAGTGCCCCTGTATCTCTCAAGGATCTCTGTGCATAGGAAA  100

seq1  GAACCTTTTACCCATGCCCCCCAAATAGCAAATTCTGCTATTATGCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTTTACCCATGCCCCCCAAATAGCAAATTCTGCTATTATGCTAAG  150

seq1  TCCAGAAGAAGGGGCATGTGGGATAAGGTATTTGCCTCCAACTGGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGAAGGGGCATGTGGGATAAGGTATTTGCCTCCAACTGGCAATG  200

seq1  TGTGTGAGGCAGCTGGGGTTGGGCTGAATTGTGGTAATGGTGATGGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGGCAGCTGGGGTTGGGCTGAATTGTGGTAATGGTGATGGTTAT  250

seq1  GCCGGCAATAGTGAGGGAAGGGGACACATTATATCTGGGAATTTCTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCAATAGTGAGGGAAGGGGACACATTATATCTGGGAATTTCTCAAG  300

seq1  GGAGAGAAGGGCATCTACACTGAGCTTCACTGAGGACATTCCTAGGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAGGGCATCTACACTGAGCTTCACTGAGGACATTCCTAGGGTGA  350

seq1  TTTGGGGGATCCCTGCTCCCTTAGCCCCTGTCCAGTGTTCTTTTCTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGATCCCTGCTCCCTTAGCCCCTGTCCAGTGTTCTTTTCTACAT  400

seq1  CCCCTCCTCCCCTTTTCTTACTCTAGGCTTATTGCTGCCCTTGGTTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTCCCCTTTTCTTACTCTAGGCTTATTGCTGCCCTTGGTTTGTA  450

seq1  ATTTTTTTATTAGATTTTTTTCTTTATTTGCATTTCAAATGTTATCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTATTAGATTTTTTTCTTTATTTGCATTTCAAATGTTATCCCCT  500

seq1  TTCCTGGTTTCCCCTCTGAAAACCCACTATCCCCTCCCTCCTCCCCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGTTTCCCCTCTGAAAACCCACTATCCCCTCCCTCCTCCCCCTTC  550

seq1  TCATCAACCTACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTATACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAACCTACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTATACTG  600

seq1  GTGCATAGAAGCTTCACAGGACCAAGGGCCTCCCCTCTCATTGATGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATAGAAGCTTCACAGGACCAAGGGCCTCCCCTCTCATTGATGACCA  650

seq1  ACAATGCCATCCTCTTCTACATATGCGGCTGGAGCCATGAGTCCCACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCCATCCTCTTCTACATATGCGGCTGGAGCCATGAGTCCCACCAT  700

seq1  GTGTACTCTTTGGTTGGTGG--TTTAGTCCCTTGGGAGCTCTGGAGGTAC  748
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GTGTACTCTTTGGTTGGTGGGTTTTAGTCCCTTGGGAGCTCTGGAGGTAC  750

seq1  TGGTTAGTTCATGGTTTGT-AATTTGTAATTCCCTCTGAACAGTGAAGGC  797
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGTTAGTTCATGGTTTGTAAATTTGTAATTCCCTCTGAACAGTGAAGGC  800

seq1  C-TGGCAAGGTAA-TGAATGTTG-AGACAG-TACACATTTTTAGAAGCAT  843
      | ||||||||||| ||||||||| |||||| |||||||||||||||||||
seq2  CTTGGCAAGGTAATTGAATGTTGAAGACAGTTACACATTTTTAGAAGCAT  850

seq1  TCTAGATATGTACAAAGAAATTCTACAATGTG-ATTAAGACTATC  887
      |||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTAGATATGTACAAAGAAATTCTACAATGTGAATTAAGACTATC  895