BAC Information

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BAC

Clone NameB6Ng01-219K05
Chromosome1 (Build37)
Map Location 48,063,028 - 48,063,982
singlet/doubletsinglet
Overlap genenone
Upstream geneEG227061, LOC666869
Downstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219K05.bB6Ng01-219K05.g
ACCGA035416GA035417
length966625
definitionB6Ng01-219K05.b B6Ng01-219K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaacctattgcagtatatgtagtaatttggagacagttga
tgtcatggaatttaaaaggtgacatatttctaggttttagagattcatga
gttcctagttgattcatatcattattattattattattattattagtagt
agtagtagtagtagtagtagtatttatgtagtcatagtcgtagttgtagt
agtacagggaaaactgggtagtagaagtaagcagtatgcatctttcctgt
atatttgtgcaaatttgatatgcatatgcaattcttaagtttttggaatt
tgttgccacaaataaagtggttcatgaatgaaatacagtacagactcaga
tcaggacttgatcaaactactttattcttttgcaaatgtccttaggaaat
gccgaataattatccctattgtcccttgagaagcagttgtgaatattctt
tactagagcttcaaagtcaaaggcaaacactaggaaatttaatctaaata
ttctaagacatttaaaatgcaactgtgtatttctgttgatatttcaactt
gttaagcttagacttttccaaagttaaagtaatcaattactcatttcctc
tgtctccatgtacacacttgaaaccaaataataacctttgtgttggaatg
aaagattaagcactcatttaatttagattaggtcctgttttgtttttcaa
ttaagaaaggggaaatcccttttagatactataggttatttatatttgct
ttgttccagtttaaaaccaaatagagctttttatattgctcattttctgt
ttttgaaaagaaactgaattaaataaatttgttgaaataaaaattattaa
ggagtaataaattcaattggattatttatttctaccctaattgtaacctc
ccattggtcaacaataaaaatgcgacatttttaaacctttgtaggagatt
atattcttgtttaatt

gaattctccactaaacccatctgatcctggacccttttttggttgggaga
ctgttaatgactgcatttatttctttagggggtttgagactgtttggatg
tttttttctgatcctgttttaactttggcacctggtatgtgtctagaaaa
ttgtctatttcattcatattttccaattttgttaaatataagcttttgta
ttagaatctgatgatttcttttgaatttccatggtttccattgttatgtc
tctctcccttttcattgctgattttattaatttggataatatctctatgg
cctctggttaatctggctaagggtttatctatcttcttggttttcttaaa
gtaccagctcctggttttgttgattctctacatacttctttttgtttcta
tttctttgatttcagacctgagtttgattatttcctgtcgtctactcctt
ttgtgtttatttacttttttttctttttttattctcttttctttgtcttt
ccttccttctttctttctctctttctttctctctctttctttctttcttt
ctttctttctttctttctttctttctttctttctttctttcttccttcct
tccttccttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48063028_48063982
seq2: B6Ng01-219K05.b_44_1009

seq1  GAATTCTTTCTAACCTATTGCAGTATATGTAGTAATTTGGAGACAGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAACCTATTGCAGTATATGTAGTAATTTGGAGACAGTTGA  50

seq1  TGTCATGGAATTTAAAAGGTGACATATTTCTAGGTTTTAGAGATTCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGAATTTAAAAGGTGACATATTTCTAGGTTTTAGAGATTCATGA  100

seq1  GTTCCTAGTTGATTCATATCATTATTATTATTATTATTATTATTAGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTAGTTGATTCATATCATTATTATTATTATTATTATTATTAGTAGT  150

seq1  AGTAGTAGTAGTAGTAGTAGTATTTATGTAGTCATAGTCGTAGTTGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGTAGTAGTAGTAGTATTTATGTAGTCATAGTCGTAGTTGTAGT  200

seq1  AGTACAGGGAAAACTGGGTAGTAGAAGTAAGCAGTATGCATCTTTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGGAAAACTGGGTAGTAGAAGTAAGCAGTATGCATCTTTCCTGT  250

seq1  ATATTTGTGCAAATTTGATATGCATATGCAATTCTTAAGTTTTTGGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTGCAAATTTGATATGCATATGCAATTCTTAAGTTTTTGGAATT  300

seq1  TGTTGCCACAAATAAAGTGGTTCATGAATGAAATACAGTACAGACTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCACAAATAAAGTGGTTCATGAATGAAATACAGTACAGACTCAGA  350

seq1  TCAGGACTTGATCAAACTACTTTATTCTTTTGCAAATGTCCTTAGGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTTGATCAAACTACTTTATTCTTTTGCAAATGTCCTTAGGAAAT  400

seq1  GCCGAATAATTATCCCTATTGTCCCTTGAGAAGCAGTTGTGAATATTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAATAATTATCCCTATTGTCCCTTGAGAAGCAGTTGTGAATATTCTT  450

seq1  TACTAGAGCTTCAAAGTCAAAGGCAAACACTAGGAAATTTAATCTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAGCTTCAAAGTCAAAGGCAAACACTAGGAAATTTAATCTAAATA  500

seq1  TTCTAAGACATTTAAAATGCAACTGTGTATTTCTGTTGATATTTCAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGACATTTAAAATGCAACTGTGTATTTCTGTTGATATTTCAACTT  550

seq1  GTTAAGCTTAGACTTTTCCAAAGTTAAAGTAATCAATTACTCATTTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCTTAGACTTTTCCAAAGTTAAAGTAATCAATTACTCATTTCCTC  600

seq1  TGTCTCCATGTACACACTTG-AACCAAATAATAACCTTTGTGTTGGAATG  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTCTCCATGTACACACTTGAAACCAAATAATAACCTTTGTGTTGGAATG  650

seq1  AAAGATTAAGCACTCATTTAATTTAGATTAGGTCCTGTTT--GTTTTCAA  697
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AAAGATTAAGCACTCATTTAATTTAGATTAGGTCCTGTTTTGTTTTTCAA  700

seq1  TTAAG-AAGGGGAAAT-CCTTTTAGATACTATAGGTTATTTATATTTGCT  745
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGGGGAAATCCCTTTTAGATACTATAGGTTATTTATATTTGCT  750

seq1  TTGTTCCAGTTTTAAAACCAAATAGAGC-TTTTATA-TGCTCA-TTTCTG  792
      ||||||||| |||||||||||||||||| ||||||| |||||| ||||||
seq2  TTGTTCCAG-TTTAAAACCAAATAGAGCTTTTTATATTGCTCATTTTCTG  799

seq1  -TTTTGAAAAGAAACTGAATTAAATAAA-TTGTTGAAATAAAAATTATTT  840
       ||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  TTTTTGAAAAGAAACTGAATTAAATAAATTTGTTGAAATAAAAATTA-TT  848

seq1  AAGGAGTAATAAATTAAATTGGATTATTTATTTATACCCTAATTGTAACC  890
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  AAGGAGTAATAAATTCAATTGGATTATTTATTTCTACCCTAATTGTAACC  898

seq1  TCACATTGGTC-ACAATAAAAATGTGACA-TTTTAAAACATTGTAGGAGA  938
      || |||||||| |||||||||||| |||| ||||||| | ||||||||||
seq2  TCCCATTGGTCAACAATAAAAATGCGACATTTTTAAACCTTTGTAGGAGA  948

seq1  TTATATT-TTGTTTAATT  955
      ||||||| ||||||||||
seq2  TTATATTCTTGTTTAATT  966


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