BAC Information

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BAC

Clone NameB6Ng01-220C19
Chromosome1 (Build37)
Map Location 66,726,826 - 66,727,713
singlet/doubletsinglet
Overlap genenone
Upstream geneCrygf, LOC667781, EG667786, Mtap2, C030018G13Rik
Downstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220C19.bB6Ng01-220C19.g
ACCGA035801GA035802
length1,252889
definitionB6Ng01-220C19.b B6Ng01-220C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgatttaaatagctgagtagtactccattgtgcaaatgtatc
acattttctgtgtccattcttctgttgagggacatctgggttctttccag
attcttgctattataaataaggcagctatgaacatagtggagcctgtgtc
cttattaccagttgtaacatcttctgggtatatgaccaggagtgatattg
ctggatcctctggtagaactatgtcaaattttatgaggaaccaccaaact
gatttccagagtggttgtaccagcttgcaatcccaccagcaatggaggag
tgttcctctttctccacatcctctccagcatctgctgttatctgagtttt
tgatcttaatcattctgactgctgtgaggtggaatctcaggtttgttttg
attagcatttccctgatgattaaggatgttgaatattttttatgtgcttc
tcagccattcagtatgccttagttgagaattcttcgtttatgtctgtacc
ccatttttattagggttatttggctttctggagtctagcttcttgagttc
tttgcatatattggatattagccccctatcagatttaagattggtaaaaa
tctgttcccgatctgttggttgccattttgtctattgacagtgtctttta
ccttacagaagcttcacaattttatgaggtcccatttatcaattcttgat
cttacagcacaagccattgcagttctgttcaggaattttcccccatgccc
atatcttcgaggttcttccccactttctcctctataagttacagtgtctc
tggttttatgtggagttgcttgatccacttagacttgagctttgtacaag
gagataagaatggaccaattcgcattcttctacatgataactgccagttg
agccagcaccatttgttaaaagtgctgtcttctttgcaccggatggtttt
agctctttgtcaaaggattaagtgaccataggtgtgtgggttcatttctg
ggtctcaatttattccattctattcaattctaattgatctacctgtcttg
taacttataccagttacccatggcagttttcatcatattggctcttgtaa
ggcacgcttggaggtcaagggataaggtgatccacccgagttcttcttat
tgttggagaatagtttttgctatctaagcttttgttattcgagtgagtca
aatatactttctaactcggggagaaattgagactgtgtagacacttctgt
ag
gaattcccattaaatgtctccatcatatatggggcttcttaaactgcatt
ggttatcttccacttgtgtttttagatgctcttatatgcttattgaacag
ttgtacctttagagttgagaacaatatccaagagctcctctataccaaac
agaacccacaaaaggcccctttctatattaaagtaggggaaatagaagtt
gagcttagaattttttaaattttttcctttttttgttagatattttcttc
atttacatttcaaatgctatcctcaaagccccctattccctcccccccat
cctgttccccaacccaccctctcctgcttcctggccctggcattcccctg
tactggggcatatgatcttcacaagaccaagggcctctcctctcattgat
ggccaactagagcttagaattttaattaacaaagatgaataagaatattt
tgatgtcccccttacagtgattgtatataagatggaaaaagaaaggcatg
ctttgtcagaatacttcttactaatatttgcagatttagtttgggggtaa
gttatgtaaggtggtaatcgtattataaacatcttataaatagatacctg
gggactgctcatgaacatacaaccagagttatacagtgtaagagactaaa
atgagaactttactttttcaaatcttttcctttatttctttttgagacaa
aatatgatgagacccaagctggccttccatcctctatattgccgataacc
ttgaatatctgatccttctgtctccaccactgagtgctgacattacagca
tgagcatgcatgagtccacacactgggaccctgccattgtaattgaaaag
agtccattcttgtctattcaatagttgttgggattgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_66726826_66727713
seq2: B6Ng01-220C19.g_64_951

seq1  GAATTCCCATTAAATGTCTCCATCATATATGGGGCTTCTTAAACTGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTAAATGTCTCCATCATATATGGGGCTTCTTAAACTGCATT  50

seq1  GGTTATCTTCCACTTGTGTTTTTAGATGCTCTTATATGCTTATTGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTTCCACTTGTGTTTTTAGATGCTCTTATATGCTTATTGAACAG  100

seq1  TTGTACCTTTAGAGTTGAGAACAATATCCAAGAGCTCCTCTATACCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTTTAGAGTTGAGAACAATATCCAAGAGCTCCTCTATACCAAAC  150

seq1  AGAACCCACAAAAGGCCCCTTTCTATATTAAAGTAGGGGAAATAGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCACAAAAGGCCCCTTTCTATATTAAAGTAGGGGAAATAGAAGTT  200

seq1  GAGCTTAGAATTTTTTAAATTTTTTCCTTTTTTTGTTAGATATTTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAGAATTTTTTAAATTTTTTCCTTTTTTTGTTAGATATTTTCTTC  250

seq1  ATTTACATTTCAAATGCTATCCTCAAAGCCCCCTATTCCCTCCCCCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGCTATCCTCAAAGCCCCCTATTCCCTCCCCCCCAT  300

seq1  CCTGTTCCCCAACCCACCCTCTCCTGCTTCCTGGCCCTGGCATTCCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCCCAACCCACCCTCTCCTGCTTCCTGGCCCTGGCATTCCCCTG  350

seq1  TACTGGGGCATATGATCTTCACAAGACCAAGGGCCTCTCCTCTCATTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGCATATGATCTTCACAAGACCAAGGGCCTCTCCTCTCATTGAT  400

seq1  GGCCAACTAGAGCTTAGAATTTTAATTAACAAAGATGAATAAGAATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTAGAGCTTAGAATTTTAATTAACAAAGATGAATAAGAATATTT  450

seq1  TGATGTCCCCCTTACAGTGATTGTATATAAGATGGAAAAAGAAAGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCCCCTTACAGTGATTGTATATAAGATGGAAAAAGAAAGGCATG  500

seq1  CTTTGTCAGAATACTTCTTACTAATATTTGCAGATTTAGTTTGGGGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCAGAATACTTCTTACTAATATTTGCAGATTTAGTTTGGGGGTAA  550

seq1  GTTATGTAAGGTGGTAATCGTATTATAAACATCTTATAAATAGATACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTAAGGTGGTAATCGTATTATAAACATCTTATAAATAGATACCTG  600

seq1  GGGACTGCTCATGAACATACAACCAGAGTTATACAGTGTAAGAGACTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGCTCATGAACATACAACCAGAGTTATACAGTGTAAGAGACTAAA  650

seq1  ATGAGAACTTTAC-TTTTCAAATCTTTTCCTTTATTTTCTTTTGAGACAA  699
      ||||||||||||| |||||||||||||||||||||||  ||||||||| |
seq2  ATGAGAACTTTACTTTTTCAAATCTTTTCCTTTATTTCTTTTTGAGAC-A  699

seq1  AAATATGATGAGACCCAAGCTGGCCTTCCATCCCCTATATTGCCGATAAC  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAATATGATGAGACCCAAGCTGGCCTTCCATCCTCTATATTGCCGATAAC  749

seq1  CTTGAATATCTGATCCTTCTGTCTCCACCACTGAGTGCTGACATTACAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATATCTGATCCTTCTGTCTCCACCACTGAGTGCTGACATTACAGC  799

seq1  ATGAGCATGCATGAGTCAGCACACTGGGACCCTGCCATTGTAATTGAAAA  849
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  ATGAGCATGCATGAGTCCACACACTGGGACCCTGCCATTGTAATTGAAAA  849

seq1  GAGTCCA-TCTTGTCTTATTCAATAGTTGTTGGGATTGGG  888
      ||||||| ||||||| ||||||||||||||||||||||||
seq2  GAGTCCATTCTTGTC-TATTCAATAGTTGTTGGGATTGGG  888