BAC Information

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BAC

Clone NameB6Ng01-221B13
Chromosome1 (Build37)
Map Location 52,712,468 - 52,713,161
singlet/doubletsinglet
Overlap genenone
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik
Downstream gene2210010L05Rik, Inpp1, Hibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221B13.bB6Ng01-221B13.g
ACCGA036481GA036482
length8571,221
definitionB6Ng01-221B13.b B6Ng01-221B13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaattaaacttgatttgagaattttataacctctcttgagatcc
ttagaaatactcagggatgtcaaagctgaggctaggaatcactaccatag
tgatttgtcctgctcctctctgcctgcaggaagttatgctaccctagagt
tctgtgtgaacccaacttggctcgatgctattaactagactattcttttt
ttttaattaggtattttccttgtttacattttcaatgctatcccaaaggt
cccccatacccacccccccaaccccttacccacccactccccctttttgg
ccctggcgttcccctgtactggggcatataaagtttgcaagtccaatggg
cctctctttgcagtgatggctgactaggccatcttttgatacatatgcag
ctaaagacaagagctccagggtactggttagttcatattgttgttccacc
tatagggttgcagttccctttagctccttgggtactttctctagctcctc
cattgggagccctgtgatccatccattagctgactgtgatcatccacttc
tgtatttgctaggccccggcatagtctcacaagagagagctatatctggg
tcctttttagcaaaattttgctagtgtgtgcaattggtgtcagcgtttgg
aagctgattatgggatggatccctgcatatggcaatcactagatggtcca
tctttttttgtcacagctccaaattttttgtctctgttactagactattc
tttaaagcagagtaatagtacatgccaaaaggccagcacagctcaagagc
cagagtcataggacagtgctactttatcgtcctagtgagcttgcagtggc
aggaagt
gaattcttgcaggataatgaatgaaggcaaaataactacaatacaagcca
tcttttgttccaaataatctatatatgctttgtgtaatttcttttctacc
agagccaattcttttttcagtctcagctgataattttcttagagtactta
agtttttatcaccttgtatggtttaaagtaaattatttagttcttgagta
gtaaatccaattatgaaccttagtcaattaataactcctgacaatttttg
aaaatcactagatgttcttaattggccctcctgatttgaaccttatgtgg
tcaaatcttttgtaaatacatactatatctaagttaattaatagaatctc
atctttgcatttttttcaggagcaatttataattctcagcaaaattctct
tcatcaaaccctaaggtatttgtatctgaaacagtgaataacatatcatc
tatataatggtaaattgtagattaaggaaactgcttgttatttatagtgg
ctgttgtacaatattggcataaggtagtactattcgacattccttgtggc
aagactctctgcaatgatatcttttcatttgtacaacttctattaaaagt
aggcactgagaaagcaagcctttttctatcatgttcaagtaaagggattg
tggaaaaccactcttttagatcaatccctataataggtcatgccttaggt
aacaaggaaggcaataggattccaggttgtaaagtgcccgtttggctgaa
tgatttttctttaattgctctcagatatgtcaccatcctctatttgacat
atttattttttttaatgacaaatacaggagaattccaggctggtagactc
ttctataggtggaaccttgcagcttgctcttggaataactgctctaagta
ttctgtaactttttctttttgttacaggccatttgttctgtccaaacagt
gttttttaagttttccaagttagtggtaggggcaggtgggagaataggcc
cagcattgtcttccccccatacgaaattgatagaagtcagccttgttgct
tgttaactggcttatgggacaagtcttgggacagtctggttactgtcttt
ttgcaatctcatctttaaattgtctttattaaggaaactttttttttttt
tcctcttaccagcccccctcttcttaaaggtgggaagggaaatgccttta
atcctgcgtgtgctgcttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52712468_52713161
seq2: B6Ng01-221B13.b_36_731 (reverse)

seq1  CCATCTAGTGATTGCCATATGCAGGGATCCATCCCATAATCAGCTTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAGTGATTGCCATATGCAGGGATCCATCCCATAATCAGCTTCCAA  50

seq1  ACGCTGACACC-ATTGCACACACTAGCAAAATTTTGCT-AAAAGGACCCA  98
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  ACGCTGACACCAATTGCACACACTAGCAAAATTTTGCTAAAAAGGACCCA  100

seq1  GATATAGCTCTCTCTTGTGAGACTATGCCGGGGCCTAGCAAATACAGAAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGCTCTCTCTTGTGAGACTATGCCGGGGCCTAGCAAATACAGAAG  150

seq1  TGGATGATCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGG  200

seq1  AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTG  250

seq1  GAACAACAATATGAACTAACCAGTACCCTGGAGCTCTTGTCTTTAGCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAATATGAACTAACCAGTACCCTGGAGCTCTTGTCTTTAGCTGC  300

seq1  ATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGCAAAGAGAGGCCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGCAAAGAGAGGCCCA  350

seq1  TTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAA  400

seq1  AAAGGGGGAGTGGGTGGGTAAGGGGTTGGGGGGGTGGGTATGGGGGACCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGAGTGGGTGGGTAAGGGGTTGGGGGGGTGGGTATGGGGGACCT  450

seq1  TTGGGATAGCATTGAAAATGTAAACAAGGAAAATACCTAATTAAAAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAGCATTGAAAATGTAAACAAGGAAAATACCTAATTAAAAAAAA  500

seq1  AGAATAGTCTAGTTAATAGCATCGAGCCAAGTTGGGTTCACACAGAACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTCTAGTTAATAGCATCGAGCCAAGTTGGGTTCACACAGAACTC  550

seq1  TAGGGTAGCATAACTTCCTGCAGGCAGAGAGGAGCAGGACAAATCACTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTAGCATAACTTCCTGCAGGCAGAGAGGAGCAGGACAAATCACTAT  600

seq1  GGTAGTGATTCCTAGCCTCAGCTTTGACATCCCTGAGTATTTCTAAGGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGATTCCTAGCCTCAGCTTTGACATCCCTGAGTATTTCTAAGGAT  650

seq1  CTCAAGAGAGGTTATAAAATTCTCAAATCAAGTTTAATTGGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGAGGTTATAAAATTCTCAAATCAAGTTTAATTGGAATTC  696