BAC Information

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BAC

Clone NameB6Ng01-222O16
Chromosome1 (Build37)
Map Location 148,855,523 - 148,856,372
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222O16.bB6Ng01-222O16.g
ACCGA037802GA037803
length1,220848
definitionB6Ng01-222O16.b B6Ng01-222O16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaatccttcgat
ttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggagaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtagttcctca
taaaattggacatagtactactggaggatcccgtaataccactcctgggc
atatatccagaaaatgttccaactggaaagaaggacaattgctccactat
gttcatagcagctttatttataatagccagaagctggaaagtacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatgcacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcgctgataagtggattttagcccagaaac
ttagaatacccaagatataagatacaattttcaaaacacatgaaactcaa
gaagaatgaagatcaaagtgtggacacttagccccttcatagaattagga
acaaaacacccatgaaaggagttacagagacaaagtttggagctaagatg
aaaggatggaccatctagagactgccatacctggggacccatcccataat
ctgcctccaaacgctgacaccattgcacacactagcaagattttgctgaa
aggacccagatagagatgtctcttgtgagaccatgctggggcctagtaaa
cacagaaatggatgctcacagtcaggtattggaatggatcacaggttctc
caatggaggagctagagatagtacccaaggagctaaaggggtctgcaacc
ctataggtagaacacatatgaactaacccggtaatccccggaactcggtt
tctctagctggcgtatgtatcagagatggccctagtcaacccatcagtgg
aaaggagagggctcatggtcttgcaaacttatatggcttcagtacagggg
gaacgcaggtcaggattggcagtgagttgggtgggtgggctgggggacac
ttttattgtcatctatctct

gaattccttgatccacttagacttgagctttatacaaggagataagaatg
gatcaattcacattcttctacatgctatccatcagttgaaccagcaccat
ttgttgaatagctgttttgctggtggtgcatgcctttaatcccatcactt
gggaggcagaggcaagcgaatttctcagtttgaggccagcctgctctaca
gagtgagttccaggacagccaaggctatacagagaaacccagtcttgaaa
aaccaaaaaaaaaaaaagctgtttttccaatggatggtttctcctataaa
ttctgtggcttaatatagtctaaggagtttgttttcttcctgagtggatc
aaatgttttttattaggcaaaaagtcatatattcacacagtggtggtatt
gaattttaagtgaagtagctgattccacttttgtctctttaataaatatg
atcaataatatctcttgcagaatagcgaacttatttataatttcagtgtt
aggattgccattataagccttaaaaatgacctacaaaatgtaactttagt
gtatattcataaatgtcttctgtggtttgagtcaggttctttcctgttta
gctgttctgttgcatgttctaggctaattcctgtctgcacctgtcatctt
gctgtaggtgtaggagtgttgggattacaaatgcattgcccacatctgga
acatatatatatatatatatatatatatatatatatatatatatatatat
atatgttccggcagaggagctcaggctatgaaaactgctcacctatacct
tttaagatcgaaactatgtgctgactttatctatcttaaaatcactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148855523_148856372
seq2: B6Ng01-222O16.g_70_917

seq1  GAATTCCTTGATCCACTTAGACTTGAGCTTTATACAAGGAGATAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGATCCACTTAGACTTGAGCTTTATACAAGGAGATAAGAATG  50

seq1  GATCAATTCACATTCTTCTACATGCTATCCATCAGTTGAACCAGCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATTCACATTCTTCTACATGCTATCCATCAGTTGAACCAGCACCAT  100

seq1  TTGTTGAATAGCTGTTTTGCTGGTGGTGCATGCCTTTAATCCCATCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATAGCTGTTTTGCTGGTGGTGCATGCCTTTAATCCCATCACTT  150

seq1  GGGAGGCAGAGGCAAGCGAATTTCTCAGTTTGAGGCCAGCCTGCTCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAAGCGAATTTCTCAGTTTGAGGCCAGCCTGCTCTACA  200

seq1  GAGTGAGTTCCAGGACAGCCAAGGCTATACAGAGAAACCCAGTCTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTCCAGGACAGCCAAGGCTATACAGAGAAACCCAGTCTTGAAA  250

seq1  AACCAAAAAAAAAAAAAGCTGTTTTTCCAATGGATGGTTTCTCCTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAAAAAAAAGCTGTTTTTCCAATGGATGGTTTCTCCTATAAA  300

seq1  TTCTGTGGCTTAATATAGTCTAAGGAGTTTGTTTTCTTCCTGAGTGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGCTTAATATAGTCTAAGGAGTTTGTTTTCTTCCTGAGTGGATC  350

seq1  AAATGTTTTTTATTAGGCAAAAAGTCATATATTCACACAGTGGTGGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTTTATTAGGCAAAAAGTCATATATTCACACAGTGGTGGTATT  400

seq1  GAATTTTAAGTGAAGTAGCTGATTCCACTTTTGTCTCTTTAATAAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAAGTGAAGTAGCTGATTCCACTTTTGTCTCTTTAATAAATATG  450

seq1  ATCAATAATATCTCTTGCAGAATAGCGAACTTATTTATAATTTCAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAATATCTCTTGCAGAATAGCGAACTTATTTATAATTTCAGTGTT  500

seq1  AGGATTGCCATTATAAGCCTTAAAAATGACCTACAAAATGTAACTTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCCATTATAAGCCTTAAAAATGACCTACAAAATGTAACTTTAGT  550

seq1  GTATATTCATAAATGTCTTCTGTGGTTTGAGTCAGGTTCTTTCCTGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCATAAATGTCTTCTGTGGTTTGAGTCAGGTTCTTTCCTGTTTA  600

seq1  GCTGTTCTGTTGCATGTTCTAGGCTAATTCCTGTCTGCACCTGTCATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTGTTGCATGTTCTAGGCTAATTCCTGTCTGCACCTGTCATCTT  650

seq1  GCTGTAGGTGTAGGAGTGTTGGGATTACAAATGCATTGCCCACATCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGTGTAGGAGTGTTGGGATTACAAATGCATTGCCCACATCTGGA  700

seq1  ACATATATATATATATATATATATATATATATATATATATATATATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATATATATATATATATATATATATATATATATATATATATAT  750

seq1  ATATATGTTCTGCAGAGGAACTCAGGCAATTAAAACTGCTCAGCTATAAC  800
      |||| | | | |||||||| ||||||| || ||||||||||| ||||| |
seq2  ATATGT-TCCGGCAGAGGAGCTCAGGCTATGAAAACTGCTCACCTATACC  799

seq1  TTTTAGCATCTTAGCTATCT-CTGAGCTTTATCTATATTTAAAATCACTT  849
      |||||  |||  | |||| | |||| ||||||||||  ||||||||||||
seq2  TTTTAAGATCGAAACTATGTGCTGA-CTTTATCTAT-CTTAAAATCACTT  847

seq1  A  850
      |
seq2  A  848


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