BAC Information

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BAC

Clone NameB6Ng01-223F22
Chromosome1 (Build37)
Map Location 148,277,591 - 148,278,755
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571
Downstream geneB830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223F22.bB6Ng01-223F22.g
ACCGA038131GA038132
length1,2211,163
definitionB6Ng01-223F22.b B6Ng01-223F22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgccttacaaaagctttgcagttttatgaggtcccatttatc
aattctagatcttagaacataagctattggtatactgttcaggaaaattt
ccactgtgctcatgtgctcgaggctcttccccattatctttcatgttagt
ttcagtgtttctggttttatgtagaagtccttgatccacttgggcttgag
cattgtacaaggagataagaatgaatcgatttgcattcttcaacatgcta
accaccagttgagcaagcactgtttgtggaaaatgctgtcttttttccac
tagatagttttagctcctttgtcaaagattaagtgaccataagtgtgtgt
attcatttctggttcttcaattctattccattgatctacctgcttgtcac
tatacccatcccatgcagtttttatcacaattgctttatagtacaactta
aggttagggatgttgattccaccagaagttcttttattgtgagaatagtt
tttcctatcctcggtttttgttattccagatgaatttgcaaattgctctt
tctaactctgagaaaagttgagttggaattttatggagattgcattgaat
ctgtaggttgctttcaacaagatggtcatttttacaatattagttctgcc
aatccatgagcatggaagatctttccatcttctgagatcttctttgattt
ctttcttcagagacttgaagttcttaccatacagatttttcacttactta
gagtcacacgaaggtattttatattatttgtgactattttgaaaggtcat
gtttccccaatatctttctcagcctgtttatcctttgacttcttcctttc
taatttgtatcattttgatctcctattattgtggaattgctctgggtaga
actttcaagtactatattgaaaggtagggagagagtaggcacctttgtct
ggtttctgactttagtgggattgcttcaagtttctctccatttagcttga
tgttgactactgcttttcgctattatttctttactatatttatgtaaggg
tcttgaattgcctgatcttttccaggattttcttccaatctggaattttt
gttcaattacctttcttcaggccttactggaggatagaattcttaatgct
tttgttgctttttcctttgagttgtttaatagcggtatcctacactttaa
aagagcagtctccatactata
gaattcaaagtctctaagataaaaacagatgaaataaatgcttcaatcta
tttccagctacaaaattacctgcatcttctggtatactgagaatgaagta
tgttaagttttgagttatatactggcattacagaaaatcaaatccatagc
acagaattatctcctttgatatgttaaaaaggagtgggactaaatgtgct
cacacattgccatagaaagcaccacaaatattgcttcctcacaagtataa
gcagaaaactataagaataaaactttttaaaaatatgataaaggtatgtt
tgaaagaatttgaatgcaatctaagcccttgagaaaagtagtccactagt
catacctcacaaatgttacatgtatgtacacaagtgaggtaaagactgat
agggaatttgaccaaaatataatgtgctcatgtattgaggaaaatataaa
ttaaaaaaaatcattgtctttcccatttgtcttctacatacaaatgtaca
cttagactcatgaaatatacaaagttgtactcatattccagacataaaaa
tataaataaaataaaacaaaaagtcttaaagaaaggcacaccaactttct
ataattaagaaatagatcagaaaagagataagaaaagaatgaaatgatgt
taaaaaattatcatagtgaactgagatcattttgtattagtgtcagaaaa
taatgagtttgttttgaaattatagggcttaaggtttgataataatagaa
gagtagagacatgtgaaagccacacaataagaaaataatctgttgtactc
acagatcagtatcagccttcacaagagaagctccctcctgtattaggtaa
gaacaattacagggacccatactatattattttgcatacaggggaatgat
cttagaatactcagtcccaatgaagggaatgatccatcaaattcctccca
tcaggctcaggctcaggacttctgaggatagaaggcagaaaggatcatat
tattgagagaaagatccattttgggtgaagaccaccagccagtagcaata
ttggagacttcacaggcatgacctgtccataaggtttaggccagtgaggt
cctagtgtgagtgggagtggcatccatcactttattcctaagccagagct
tactttcccactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148277591_148278755
seq2: B6Ng01-223F22.g_68_1230

seq1  GAATTCAAAGTCTCTAAGATAAAAACAGATGAAATAAATGCTTCAATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCTCTAAGATAAAAACAGATGAAATAAATGCTTCAATCTA  50

seq1  TTTCCAGCTACAAAATTACCTGCATCTTCTGGTATACTGAGAATGAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCTACAAAATTACCTGCATCTTCTGGTATACTGAGAATGAAGTA  100

seq1  TGTTAAGTTTTGAGTTATATACTGGCATTACAGAAAATCAAATCCATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGTTTTGAGTTATATACTGGCATTACAGAAAATCAAATCCATAGC  150

seq1  ACAGAATTATCTCCTTTGATATGTTAAAAAGGAGTGGGACTAAATGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTATCTCCTTTGATATGTTAAAAAGGAGTGGGACTAAATGTGCT  200

seq1  CACACATTGCCATAGAAAGCACCACAAATATTGCTTCCTCACAAGTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTGCCATAGAAAGCACCACAAATATTGCTTCCTCACAAGTATAA  250

seq1  GCAGAAAACTATAAGAATAAAACTTTTTAAAAATATGATAAAGGTATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAACTATAAGAATAAAACTTTTTAAAAATATGATAAAGGTATGTT  300

seq1  TGAAAGAATTTGAATGCAATCTAAGCCCTTGAGAAAAGTAGTCCACTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAATTTGAATGCAATCTAAGCCCTTGAGAAAAGTAGTCCACTAGT  350

seq1  CATACCTCACAAATGTTACATGTATGTACACAAGTGAGGTAAAGACTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTCACAAATGTTACATGTATGTACACAAGTGAGGTAAAGACTGAT  400

seq1  AGGGAATTTGACCAAAATATAATGTGCTCATGTATTGAGGAAAATATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATTTGACCAAAATATAATGTGCTCATGTATTGAGGAAAATATAAA  450

seq1  TTAAAAAAAATCATTGTCTTTCCCATTTGTCTTCTACATACAAATGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAATCATTGTCTTTCCCATTTGTCTTCTACATACAAATGTACA  500

seq1  CTTAGACTCATGAAATATACAAAGTTGTACTCATATTCCAGACATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACTCATGAAATATACAAAGTTGTACTCATATTCCAGACATAAAAA  550

seq1  TATAAATAAAATAAAACAAAAAGTCTTAAAGAAAGGCACACCAACTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAAATAAAACAAAAAGTCTTAAAGAAAGGCACACCAACTTTCT  600

seq1  ATAATTAAGAAATAGATCAGAAAAGAGATAAGAAAAGAATGAAATGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAGAAATAGATCAGAAAAGAGATAAGAAAAGAATGAAATGATGT  650

seq1  TAAAAAATTATCATAGTGAACTGAGATCATTTTGTATTAGTGTCAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTATCATAGTGAACTGAGATCATTTTGTATTAGTGTCAGAAAA  700

seq1  TAATGAGTTTGTTTTGAAATTATAGGGCTTAAGGTTTGATAATAATAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTTTGTTTTGAAATTATAGGGCTTAAGGTTTGATAATAATAGAA  750

seq1  GAGTAGAGACATGTGAAAGCCACACAATAAGAAAATAATCTGTTGTACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGACATGTGAAAGCCACACAATAAGAAAATAATCTGTTGTACTC  800

seq1  ACAGATCAGTATCAGCCTTCACAAGAGAAGCTCCCTCCTGTATTAGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGTATCAGCCTTCACAAGAGAAGCTCCCTCCTGTATTAGGTAA  850

seq1  GAACAATTACAGGGACCCATACTATATTA-TTTGCATACA-GGGAATGAT  898
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  GAACAATTACAGGGACCCATACTATATTATTTTGCATACAGGGGAATGAT  900

seq1  CTTAGAATACTCAGTCCC-ATGAA-GGAATGATCCATCAAATTCCTCCCA  946
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  CTTAGAATACTCAGTCCCAATGAAGGGAATGATCCATCAAATTCCTCCCA  950

seq1  TCAGGCTCAGGCTCAGGGACTCTGAGGAATAGAAGGCAGAAA-GATCATA  995
      |||||||||||||||||   ||||||| |||||||||||||| |||||||
seq2  TCAGGCTCAGGCTCAGGACTTCTGAGG-ATAGAAGGCAGAAAGGATCATA  999

seq1  TTATTGAGAGAAAAGATCCAATTTGGGTGAAAGACACCAAGCCAGTAGC-  1044
      |||||||||| ||||||||| |||||||| |||||  | |||||||||| 
seq2  TTATTGAGAG-AAAGATCCATTTTGGGTG-AAGACCACCAGCCAGTAGCA  1047

seq1  ATATT-GAGACTTCACAGGCATGACCTGGTCCCATAAAGGTTTAAGCCAG  1093
      ||||| ||||||||||||||||||||||   |||| |||||||| |||||
seq2  ATATTGGAGACTTCACAGGCATGACCTG--TCCAT-AAGGTTTAGGCCAG  1094

seq1  TTGAGGGTCCTAGTGTTGAGTGGGAAAGTGGATACAATCAC-TTATCCCT  1142
       ||| |||||||||| ||||||||  |||||   | ||||| |||| |||
seq2  -TGA-GGTCCTAGTG-TGAGTGGG--AGTGGCATCCATCACTTTATTCCT  1139

seq1  AAGCCAGAAGCTA-TCTCCCACTG  1165
      ||||||||   || | ||||||||
seq2  AAGCCAGAGCTTACTTTCCCACTG  1163