BAC Information

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BAC

Clone NameB6Ng01-224C10
Chromosome1 (Build37)
Map Location 70,268,339 - 70,269,434
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneEG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224C10.bB6Ng01-224C10.g
ACCGA038693GA038694
length1,1011,161
definitionB6Ng01-224C10.b B6Ng01-224C10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggacacgatggtgctacaccgttcattgagacaagtcattca
gagatatatttgatacatttgacagagtatgttggctacccaactactgt
aaaatcctagctttcatagaaaagttactccctcaaaacatgggaatctc
ctcagccagcaggtgaggagaaagagtggagacatatcataggagcctct
gggacagagaatgacttagcagacgcacaactggcaaaggagtgcagcat
aatgttctctagaggggttgtggaaggttccgggctaggactttcagaca
tcacctggctttatctcacttaggttgtttagttgcagacctagcaaaag
gctgagatgatatcctgtcatgtggtagacctatggagataaaatatttc
aaagtcctaccaaatctgactttgctgaatgatgactggggtgcagtaga
attcctactggagccaggactgtgttgagaactgaggatgagcggagggc
gacgataaagttagcactctctgcaaatcttattaggctgacttttatta
cacgtgaaaagtaaacaggagctactgcatataatttaggaataattaaa
atgtacattaatattcaactgctatggtcctatttttcaaacatagactt
tgctcttggtttaacatcgtgagtgttaagatttgtagtgctgagtataa
cccttagaagtgcaaaatgtctatcatttactgatgattatgattagggt
acacctttcctaaaggattggtaaatagattcaataacaaatataccata
atcattgttaggttatgacagataaagcatggtgatatgtgtgtttactt
gcttttattttcccttccagtttatacatgcttataaaaccattaactag
catgtgtttatgaatatgtatgtgtatgtgggcatttttgtattgttgaa
gaagagggcttggaacattgtttaagaagggtcagctgcctcacttggat
tgcaagatggggagtttgctctttccatttctctcttctgaaacctgaaa
atttttcactgccaacaggcagaaatataggggataaacaaaggcaagca
a
gaattcctgatttgattcaaataattttagaaaattagaatgattgatag
aaagtttaaggagatcaagttgttttgccaaaaagccacaataaacttag
aatcaaaaatagaaatgtgtcccctcctcccagaatactaagtaaaggct
gcataaaaaggagctcaataaacttccataagttacgagacgtaaattgc
actagtaaaaatctacatttgggacagattttttatcaagaaaaaagaca
ttcattctaggtcagatacaaggacaaggccacaggtgtgcaccatgata
aagaaaagctatggaaatatagaactattgttttaaatttataatgagct
tatggaatgaaacacagataaaacaactgctttgatcttattaccaacaa
ccctgctgtaacttgctcttgtgtaacattttatctgtgagataattctt
tcttatgtagagaactttgtttcaggggctataaatggattggaggaaaa
attaaagttcttagaggctgctcattagagctctgctccatccatcaact
gtaaataagtgtgtatgtacatatgaatagatgaatataagtatgtaata
ttgtaaatttaatggagttcttggagctcccttaccctttatgcagtttt
ctctccttttctttcttgttggtcccttaagagttataagagttcatagt
ttctcacaggttacagagaatactggccccagataattaagatttgcttc
catcaaccctactagtgataaccctgtaaactgatatcaccactgatccc
aattgctgacttcatactatctaccttcctcagttacctgtgggtatcaa
aactgggccttcaacattttggtgcctggaacaagtacctattctaggta
aattccttatggttttggtaaggataggagtctcacctaggatacttata
gatcccctcattagttactgccaggttaggaacactgagaaatctgatcc
tctgtatgttttactctagtcactggctgccagtagcagcagcctccatc
agctgctacagcactgttcctatagctgactcttgctctccttcctcagt
ttacctgggatgtaaaagcttgctcttgccaacatgtatagtataaggtt
ggtgtttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70268339_70269434
seq2: B6Ng01-224C10.b_48_1148

seq1  GAATTCTTGGACACGATGGTGCTACACCGTTCATTGAGACAAGTCATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGACACGATGGTGCTACACCGTTCATTGAGACAAGTCATTCA  50

seq1  GAGATATATTTGATACATTTGACAGAGTATGTTGGCTACCCAACTACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATATTTGATACATTTGACAGAGTATGTTGGCTACCCAACTACTGT  100

seq1  AAAATCCTAGCTTTCATAGAAAAGTTACTCCCTCAAAACATGGGAATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTAGCTTTCATAGAAAAGTTACTCCCTCAAAACATGGGAATCTC  150

seq1  CTCAGCCAGCAGGTGAGGAGAAAGAGTGGAGACATATCATAGGAGCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCAGCAGGTGAGGAGAAAGAGTGGAGACATATCATAGGAGCCTCT  200

seq1  GGGACAGAGAATGACTTAGCAGACGCACAACTGGCAAAGGAGTGCAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAGAATGACTTAGCAGACGCACAACTGGCAAAGGAGTGCAGCAT  250

seq1  AATGTTCTCTAGAGGGGTTGTGGAAGGTTCCGGGCTAGGACTTTCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTCTAGAGGGGTTGTGGAAGGTTCCGGGCTAGGACTTTCAGACA  300

seq1  TCACCTGGCTTTATCTCACTTAGGTTGTTTAGTTGCAGACCTAGCAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGCTTTATCTCACTTAGGTTGTTTAGTTGCAGACCTAGCAAAAG  350

seq1  GCTGAGATGATATCCTGTCATGTGGTAGACCTATGGAGATAAAATATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATGATATCCTGTCATGTGGTAGACCTATGGAGATAAAATATTTC  400

seq1  AAAGTCCTACCAAATCTGACTTTGCTGAATGATGACTGGGGTGCAGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTACCAAATCTGACTTTGCTGAATGATGACTGGGGTGCAGTAGA  450

seq1  ATTCCTACTGGAGCCAGGACTGTGTTGAGAACTGAGGATGAGCGGAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTACTGGAGCCAGGACTGTGTTGAGAACTGAGGATGAGCGGAGGGC  500

seq1  GACGATAAAGTTAGCACTCTCTGCAAATCTTATTAGGCTGACTTTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATAAAGTTAGCACTCTCTGCAAATCTTATTAGGCTGACTTTTATTA  550

seq1  CACGTGAAAAGTAAACAGGAGCTACTGCATATAATTTAGGAATAATTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAAAAGTAAACAGGAGCTACTGCATATAATTTAGGAATAATTAAA  600

seq1  ATGTACATTAATATTCAACTGCTATGGTCCTATTTTTCAAACATAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTAATATTCAACTGCTATGGTCCTATTTTTCAAACATAGACTT  650

seq1  TGCTCTTGGTTTAACATCGTGAGTGTTAAGATTTGTAGTGCTGAGTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTGGTTTAACATCGTGAGTGTTAAGATTTGTAGTGCTGAGTATAA  700

seq1  CCCTTAGAAGTGCAAAATGTCTATCATTTACTGATGATTATGATTAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGAAGTGCAAAATGTCTATCATTTACTGATGATTATGATTAGGGT  750

seq1  ACACCTTTCCTAAAGGATTGGTAAATAGATTCAATAACAAATATACCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTTCCTAAAGGATTGGTAAATAGATTCAATAACAAATATACCATA  800

seq1  ATCATTGTTAGGTTATGACAGATAAAGCATGGTGATATGTGTGTTTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTTAGGTTATGACAGATAAAGCATGGTGATATGTGTGTTTACTT  850

seq1  GCTTTTATTTT-CCTTCCAGTTTATACATGCTTATAAAACCATTAACTAG  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATTTTCCCTTCCAGTTTATACATGCTTATAAAACCATTAACTAG  900

seq1  CATGTGTTTATGAATATGTATGTGTATGTGGGCATTTTTGTATTGTTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTATGAATATGTATGTGTATGTGGGCATTTTTGTATTGTTGAA  950

seq1  GAAGAGGGCTTGGAACATTG-TTAAG-AGGGTCAGCTGCCTCAC-TGGAT  996
      |||||||||||||||||||| ||||| ||||||||||||||||| |||||
seq2  GAAGAGGGCTTGGAACATTGTTTAAGAAGGGTCAGCTGCCTCACTTGGAT  1000

seq1  TGCAAGAT-GGGAGTTTGCTCTTTTCATTTCTCTTCCTTCTGAACCCTGA  1045
      |||||||| ||||||||||||||| |||||||||  |||||||| |||||
seq2  TGCAAGATGGGGAGTTTGCTCTTTCCATTTCTCT--CTTCTGAAACCTGA  1048

seq1  AAA-TTTTCACTGCCAACAGGCAAGAATATAGGGGA-AAACAAAAGCAAG  1093
      ||| |||||||||||||||||||  ||||||||||| ||||||| |||||
seq2  AAATTTTTCACTGCCAACAGGCAGAAATATAGGGGATAAACAAAGGCAAG  1098

seq1  CAA  1096
      |||
seq2  CAA  1101