BAC Information

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BAC

Clone NameB6Ng01-225B05
Chromosome1 (Build37)
Map Location 84,326,352 - 84,327,516
singlet/doubletsinglet
Overlap genenone
Upstream gene4930544G21Rik, 5033414K04Rik, LOC100039638
Downstream geneDner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B05.bB6Ng01-225B05.g
ACCGA039361GA039362
length1,169886
definitionB6Ng01-225B05.b B6Ng01-225B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagcaacctggtctatagagtgagctctaggctagccagggc
tgtataatgaaaccctaccatgccaaataaaatgagttgttgtctaccct
tgttttgcttttgcaaagactagagtttaatttctaacatgtgcgacctg
tgactccagttctaggggaatctgacatcccctctggcctctgtgaatgc
taaagtcacttgtaaagacacacttgcacatggacatacacatttgcaca
taactaaaaataaacattttaagataatttatgttttatcaggatagctt
taggataatatatgtcatatgactagttgtcatgatacccttaatctgat
tgtgatgcttagcacagtgtaccctatgtggctggtcagaatgcagatgt
ctcattgatgttctttacgtgctctgcaaatcactggggttatagttctg
ataatggttgttgattcttgggacgaactctacagataaacccattagtc
tgatcagtgggcccatgggttatttaatgatggcatcttgctcacactct
ctccttttccctctctctcctccacaaatcccagctgtgtccccacaccc
taatgtatgtctactttactcattagatccctgtgctctgcttgcttgga
actgcctctcctctcatataagccaggatttctctagtcagaaaaccagg
gcaatcaagattcaagggaactacagtcctctgttgccagttgtctgatg
tctgaaacagctatttcttatatgtcatccagttttctggctgtctacaa
aagaagtctgagtctaatcctaattactgtgtagtaaatataaagaaaag
cctttttatagaaatccactttccatattccttagtgcagtggtttaaat
ggaatgtttcccatgatctctggcatttaattggtccctagttggtagca
ctgtttgggaatatttaggagtatggccttgttggtagagatgtaccatt
tgaagtggtttgagagtttaaagactgctacaatttctagtcagtctctt
cttgtttctgcttgtgtcaagaatatgagctctcggcttcaagctctagc
ctgccatgtttgctggccttcaaggctttccccacgtgaacggatctctt
tactcctctggaaaccata

gaattctcatattgcgttccctgaactgtagagtgagggctattatggtg
ggaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagt
gaatcaaaaacagtatcgtattcctggaggaattgcagaaattactgcca
ctatcaaggacttgaaagatgcaggggtggtggttcccaccacatctcca
tttaactctcctatctggccagtgcagaaaacagatggatcatggagaat
gacagttgattatcgaaaactaaatcaggtagtaactccaattgcagctg
ctgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggc
acctggtatgcggctattgatctggcaaatgccttcttctcagtacctgt
ccataaggaccaccagaagcaatttgctttcagttggcaaggccaacagt
ataccttcacagttttgcctcaaggatatattaactctcctgccctgtgt
cataatttagttagaagggatcttgatcgtttggatcttccacaaaatat
cacattggtgcactatattgatgacattatgctgattggaccaagtgagc
aggaagtagcaaccactttggactcattggtaacacatatgcgtatcaga
ggatgggaaataaatccaaccaaaatttcaaggaccatctacctcagtga
aattcttaggagtccagtggtgtggggcatgcagagatattccttctaag
gtgaaagataagttatgcacctggcccctcctacaaccaaaaagaagcac
aacgtttagtgggtctattggattctggagacacacatccctcacttggg
tgtgttacttaggcctattacaagtgactcggaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84326352_84327516
seq2: B6Ng01-225B05.b_45_1213 (reverse)

seq1  TATGGTCT-CAGAGGAGT-AAGAG-TCTG-TCACGGTGGGGAAGCC-TGA  45
      |||||| | ||||||||| ||||| || | |||||  ||| ||||| |||
seq2  TATGGTTTCCAGAGGAGTAAAGAGATCCGTTCACGTGGGGAAAGCCTTGA  50

seq1  A-GCCAGCAAACATGGCA-GCTAGAGC-TGAAGCCGAGAGCTCATA-TCT  91
      | |||||||||||||||| |||||||| |||||||||||||||||| |||
seq2  AGGCCAGCAAACATGGCAGGCTAGAGCTTGAAGCCGAGAGCTCATATTCT  100

seq1  TGAACCACAAGCAGGAAACAG-AGAGACTGGACTAGAAATGGTAGCAGTC  140
      |||  ||||||||| ||  || ||||||| |||||||||| |||||||||
seq2  TGA--CACAAGCAGAAACAAGAAGAGACT-GACTAGAAATTGTAGCAGTC  147

seq1  TTTAAACTCTCAAAACCCACTTCAAATGGTACATCTCTACCAACAAGGCC  190
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCTCAAA--CCACTTCAAATGGTACATCTCTACCAACAAGGCC  195

seq1  ATACCTCCTAAATATTCCCAAACAGTGCTACCAACTAGGGACCAATTAAA  240
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATA-CTCCTAAATATTCCCAAACAGTGCTACCAACTAGGGACCAATTAAA  244

seq1  TGCCAGAGATCATGGGAAACATTCCATTTAAACCACTGCACTAAGGAATA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGATCATGGGAAACATTCCATTTAAACCACTGCACTAAGGAATA  294

seq1  TGGAAAGTGGATTTCTATAAAAAGGCTTTTCTTTATATTTACTACACAGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTGGATTTCTATAAAAAGGCTTTTCTTTATATTTACTACACAGT  344

seq1  AATTAGGATTAGACTCAGACTTCTTTTGTAGACAGCCAGAAAACTGGATG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGATTAGACTCAGACTTCTTTTGTAGACAGCCAGAAAACTGGATG  394

seq1  ACATATAAGAAATAGCTGTTTCAGACATCAGACAACTGGCAACAGAGGAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAGAAATAGCTGTTTCAGACATCAGACAACTGGCAACAGAGGAC  444

seq1  TGTAGTTCCCTTGAATCTTGATTGCCCTGGTTTTCTGACTAGAGAAATCC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCCCTTGAATCTTGATTGCCCTGGTTTTCTGACTAGAGAAATCC  494

seq1  TGGCTTATATGAGAGGAGAGGCAGTTCCAAGCAAGCAGAGCACAGGGATC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATATGAGAGGAGAGGCAGTTCCAAGCAAGCAGAGCACAGGGATC  544

seq1  TAATGAGTAAAGTAGACATACATTAGGGTGTGGGGACACAGCTGGGATTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTAAAGTAGACATACATTAGGGTGTGGGGACACAGCTGGGATTT  594

seq1  GTGGAGGAGAGAGAGGGAAAAGGAGAGAGTGTGAGCAAGATGCCATCATT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGAGAGAGAGGGAAAAGGAGAGAGTGTGAGCAAGATGCCATCATT  644

seq1  AAATAACCCATGGGCCCACTGATCAGACTAATGGGTTTATCTGTAGAGTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCCATGGGCCCACTGATCAGACTAATGGGTTTATCTGTAGAGTT  694

seq1  CGTCCCAAGAATCAACAACCATTATCAGAACTATAACCCCAGTGATTTGC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCAAGAATCAACAACCATTATCAGAACTATAACCCCAGTGATTTGC  744

seq1  AGAGCACGTAAAGAACATCAATGAGACATCTGCATTCTGACCAGCCACAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACGTAAAGAACATCAATGAGACATCTGCATTCTGACCAGCCACAT  794

seq1  AGGGTACACTGTGCTAAGCATCACAATCAGATTAAGGGTATCATGACAAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACACTGTGCTAAGCATCACAATCAGATTAAGGGTATCATGACAAC  844

seq1  TAGTCATATGACATATATTATCCTAAAGCTATCCTGATAAAACATAAATT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATATGACATATATTATCCTAAAGCTATCCTGATAAAACATAAATT  894

seq1  ATCTTAAAATGTTTATTTTTAGTTATGTGCAAATGTGTATGTCCATGTGC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAATGTTTATTTTTAGTTATGTGCAAATGTGTATGTCCATGTGC  944

seq1  AAGTGTGTCTTTACAAGTGACTTTAGCATTCACAGAGGCCAGAGGGGATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTCTTTACAAGTGACTTTAGCATTCACAGAGGCCAGAGGGGATG  994

seq1  TCAGATTCCCCTAGAACTGGAGTCACAGGTCGCACATGTTAGAAATTAAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCCCCTAGAACTGGAGTCACAGGTCGCACATGTTAGAAATTAAA  1044

seq1  CTCTAGTCTTTGCAAAAGCAAAACAAGGGTAGACAACAACTCATTTTATT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTCTTTGCAAAAGCAAAACAAGGGTAGACAACAACTCATTTTATT  1094

seq1  TGGCATGGTAGGGTTTCATTATACAGCCCTGGCTAGCCTAGAGCTCACTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGTAGGGTTTCATTATACAGCCCTGGCTAGCCTAGAGCTCACTC  1144

seq1  TATAGACCAGGTTGCTCTTGAATTC  1165
      |||||||||||||||||||||||||
seq2  TATAGACCAGGTTGCTCTTGAATTC  1169


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