BAC Information

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BAC

Clone NameB6Ng01-226F20
Chromosome1 (Build37)
Map Location 102,969,848 - 102,971,008
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226F20.bB6Ng01-226F20.g
ACCGA040326GA040327
length1,1581,181
definitionB6Ng01-226F20.b B6Ng01-226F20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaatctctaatcattgcagatatttctaaataatttctaaaa
actggactaaaaaagcattctcataccagtcacaccactttttccaagtc
tttatcagttttatacagaatataaatgcataattcttactgtttaaccc
tgaagaagctaatgtttgaacacctggttttcaggtggtgtccctgtttg
acttaaggctgtggagggagaacttgaatgtggaatgttgtctcacttcc
tgtgcatctctactttttgcttactcacatattattgagcagccccataa
tcttgttcctgtggcctcaggcttctcctaccataatagaaaataacttc
aaaaatgaatctaaataagtctttttcctgtagttgctttgctacatttt
cagttataacaataaaagtaactaagtcaataaccaagaaattaacaaac
aaataaagtcatagcttaacataaatatgaataactttaataattaagtg
aagactatagaaagaaatcaggattattacataagatcaaaaccaaccag
caaggatgcttattagcaaattattgcaggtactaaatgagatataaact
gttataagatatggatttaagtaataaaatctaagactagaaaataaatt
ctgggtcatatagaatgcatggttttcaagactgacagaatagctggtat
agtccaatattatgaagaagaaaagctgtttaatccacagtgatgtagaa
taaaagtacaaatagcagagtacagcgtctagtaacagccttttagcgaa
tgtcttagagaatctgagagaaagcatcccataccaaaatatgaatcaga
atagttgggctaggtcatgatttttccttttataccatgcctctcccaag
aacctcctcattcttttttgagggcagatgctctgctgcaagagagtctt
tctgttgtggtaaatctacaacccatgtatgttctagcaatgaaaacaca
acaacagtaatatgcatataatgctgtgtgctaagatcgggcagaatctg
caactaacactgcaatcttcacaattctatgagaaaactaagaaactgtg
ttctcaagcaatgtgcttctgctctgccttacttcttcctctcttctcct
catgcatc

gaattcagggtccctgttttcaggtggacaaggagtcagcaggatgacaa
cagacacagacacccaagagagtgctgtatctgaatataatttctcaaag
ggagcatcatacagaagaaaaatagggaagttaggtgatacatctgccaa
ggtacatcaagaatgcataatggctctttacacaaaacagagaaaatgca
tacataaaagttaacaggaaccaggcagtgttacaactgagataagatca
tccctatctaaaatcagttattcataggagccaggtgaaagggctaatac
tcccaggtgcaatactagtttattgttaaggaacatcaggggtcccttag
taaatacctaattatgctattcctctgggcctagtgaaaaacatgcacca
gggaaattccatactgctaatcttttcatgaataatacaatactctagtt
cctccttaaaccaaaacccactttcttctactattatataaggtaggctg
caaatcatgtctgtaatgagaattgtaagtttactattttgaactagccc
tgaaatttctagctcctatccagcgaactgtgggatgcctgattactaac
tatcaacactggaggcatttcgtctgaatgagtaacattcttatgaaatt
ctaaacccagggtcggctcaaggactgcctaggtcattggtaaaggccag
aaagcaaagttcaacctaatttaggtatttgtcaagtcattgcctggagg
catctataataaaacaatactgaaagaaaaacccagaaccattcaccaac
tataggaaggatgagtctgaaatacatctgtttatggggcaccagaaatt
ttccaggaatcatgtttccatgaaactttatgcctcagactgcagccaag
cttttgggcctaccacacagtttttactggagtgggtgtgtcatatttgc
atgtgtatcctgacaaatttgagactcactaataggtatcacccaatttt
cccttgaagcaaagtgactcacatgatgttaaactggcaaatgggctgca
tctgcatgagactagcctcaggcttttctgcctccaaatctgggaataaa
tggcaccacattctatgaatgccatagttgaataagtgggacagactcac
agcatattctctcatccagtccaagattagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102969848_102971008
seq2: B6Ng01-226F20.b_47_1204 (reverse)

seq1  GATGCATAGGAGGAGGAGGAAGAAGAAGAAGAAAAGCAGAGCAGAAGCAC  50
      |||||||  |||||| ||  ||| ||||||| || |||||||||||||||
seq2  GATGCAT--GAGGAGAAG--AGAGGAAGAAGTAAGGCAGAGCAGAAGCAC  46

seq1  ATGGCCTGGAGAAACCACAAGTTCTAAGGTGTCTCATAGA--TGTGAAAG  98
      || | || |||||  ||||  |||| || | |||||||||  |||| |||
seq2  ATTG-CTTGAGAA--CACAGTTTCTTAGTTTTCTCATAGAATTGTG-AAG  92

seq1  ATGGCAGTG-TAGTGGCAGA-TCTGCCCGATCTAGGCACACAGCA-TATA  145
      || |||||| |||| ||||| ||||||||||||  |||||||||| ||||
seq2  ATTGCAGTGTTAGTTGCAGATTCTGCCCGATCTTAGCACACAGCATTATA  142

seq1  TGCATATTAACTG-TGTTGTGTTTTCATTGCTAGAACATACATGGGTTGT  194
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TGCATATT-ACTGTTGTTGTGTTTTCATTGCTAGAACATACATGGGTTGT  191

seq1  AGATTTACCACAACAGAAAGACTCTCCTGCAGCAGAGCATCTGCCCTCAA  244
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATTTACCACAACAGAAAGACTCTCTTGCAGCAGAGCATCTGCCCTCAA  241

seq1  AAAAGAATGAGGAGGTTCTTGGGAGAGGCATGGTATAAAAGGAAAAATCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATGAGGAGGTTCTTGGGAGAGGCATGGTATAAAAGGAAAAATCA  291

seq1  TGACCTAGCCCAACTATTCTGATTCATATTTTGGTATGGGATGCTTTCTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAGCCCAACTATTCTGATTCATATTTTGGTATGGGATGCTTTCTC  341

seq1  TCAGATTCTCTAAGACATTCGCTAAAAGGCTGTTACTAGACGCTGTACTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCTCTAAGACATTCGCTAAAAGGCTGTTACTAGACGCTGTACTC  391

seq1  TGCTATTTGTACTTTTATTCTACATCACTGTGGATTAAACAGCTTTTCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTGTACTTTTATTCTACATCACTGTGGATTAAACAGCTTTTCTT  441

seq1  CTTCATAATATTGGACTATACCAGCTATTCTGTCAGTCTTGAAAACCATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATATTGGACTATACCAGCTATTCTGTCAGTCTTGAAAACCATG  491

seq1  CATTCTATATGACCCAGAATTTATTTTCTAGTCTTAGATTTTATTACTTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATATGACCCAGAATTTATTTTCTAGTCTTAGATTTTATTACTTA  541

seq1  AATCCATATCTTATAACAGTTTATATCTCATTTAGTACCTGCAATAATTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATATCTTATAACAGTTTATATCTCATTTAGTACCTGCAATAATTT  591

seq1  GCTAATAAGCATCCTTGCTGGTTGGTTTTGATCTTATGTAATAATCCTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATAAGCATCCTTGCTGGTTGGTTTTGATCTTATGTAATAATCCTGA  641

seq1  TTTCTTTCTATAGTCTTCACTTAATTATTAAAGTTATTCATATTTATGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTATAGTCTTCACTTAATTATTAAAGTTATTCATATTTATGTT  691

seq1  AAGCTATGACTTTATTTGTTTGTTAATTTCTTGGTTATTGACTTAGTTAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATGACTTTATTTGTTTGTTAATTTCTTGGTTATTGACTTAGTTAC  741

seq1  TTTTATTGTTATAACTGAAAATGTAGCAAAGCAACTACAGGAAAAAGACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTTATAACTGAAAATGTAGCAAAGCAACTACAGGAAAAAGACT  791

seq1  TATTTAGATTCATTTTTGAAGTTATTTTCTATTATGGTAGGAGAAGCCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGATTCATTTTTGAAGTTATTTTCTATTATGGTAGGAGAAGCCTG  841

seq1  AGGCCACAGGAACAAGATTATGGGGCTGCTCAATAATATGTGAGTAAGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAGGAACAAGATTATGGGGCTGCTCAATAATATGTGAGTAAGCA  891

seq1  AAAAGTAGAGATGCACAGGAAGTGAGACAACATTCCACATTCAAGTTCTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGAGATGCACAGGAAGTGAGACAACATTCCACATTCAAGTTCTC  941

seq1  CCTCCACAGCCTTAAGTCAAACAGGGACACCACCTGAAAACCAGGTGTTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAGCCTTAAGTCAAACAGGGACACCACCTGAAAACCAGGTGTTC  991

seq1  AAACATTAGCTTCTTCAGGGTTAAACAGTAAGAATTATGCATTTATATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAGCTTCTTCAGGGTTAAACAGTAAGAATTATGCATTTATATTC  1041

seq1  TGTATAAAACTGATAAAGACTTGGAAAAAGTGGTGTGACTGGTATGAGAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAACTGATAAAGACTTGGAAAAAGTGGTGTGACTGGTATGAGAA  1091

seq1  TGCTTTTTTAGTCCAGTTTTTAGAAATTATTTAGAAATATCTGCAATGAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTAGTCCAGTTTTTAGAAATTATTTAGAAATATCTGCAATGAT  1141

seq1  TAGAGATTGGTGAATTC  1161
      |||||||||||||||||
seq2  TAGAGATTGGTGAATTC  1158


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