BAC Information

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BAC

Clone NameB6Ng01-232C03
Chromosome1 (Build37)
Map Location 76,672,540 - 76,673,720
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039137, Tfdp1-ps, Epha4, LOC100039330
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232C03.bB6Ng01-232C03.g
ACCGA044545GA044546
length1,1911,229
definitionB6Ng01-232C03.b B6Ng01-232C03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaagaatcagtaaaaatgaatttttttgaaaaggaaaatttt
ttgaataaaatttcaaacagttcaaaatgttctccagggttccacactat
gtgtttaaagtagaagacaaaaactcattcttaggagagtactatgattt
taaaaatgttttcaccgggtggtgatgacactatgcctttaatcccagca
cttgggaagcagaggcaggcaattttttctgagtttgaggccagcctggt
ctacagagtgagttccaggacagccagggctacacagagaaaccctgtca
ctctcgaataaataaataaataaataaataaataaataaataaataaata
aataaatgttttcaacagcagttttgaaatcagcaccaaacattcataaa
gtgtgaaactttaaacaaacaacctgggtttctcttataatgtgaaaaag
taggtcagcttcattggaaatgtaatagtttcatatcagaagttcaaagt
ggaaccaggaacctgtaaaaggatgaccttgggagagcgtgatataccat
cactaatgtactgcaacacaatgacactgttacaagcagtagacagtcgc
aaagagatgcaaccagtcatggtcaaagatgtctgttagtgcctaagagg
gtcacttcagtctcctgggaccactattcaactaattcctgacggagggc
attcaaacaagttaagctcaaataaagtttgcattaaaattggctcatta
tcttgttaaatttcaataaaagtttctgttatttttgaagttacattttt
ttgtactgtaatggggaaaaaaaagtagagtccaaataggaaatctgtca
gtggatctagtgagcttttatgcggtgaataggaagtagcctttatattg
gttgtgtacgagtcttccctttagatcagggtgaccaggaatagtacaca
tgccttctgacaatgggttactattcaaagtgaatcacaaaggctggacc
tgcaggctcatttattcttccaggctaagcaatctccagaagggaagaca
gatgcattttcctgagataggctaggctttttatcaagaacagctgataa
tggacttattcgaagctggcttgtgctcgagctcacatctggtttcgaag
aattggcctgaaatactaacacgaagaacaagcttttgttg

gaattcaagacctatacctaaacataataaaagcaatatacagcaaacta
aatggagagaaacttgaagcaatcccactaaaatcaggggcaagtctgct
tactttctccctacctatttaatagagtacttaaagtcctagctagagca
atttgacaacaaaaggagatgaaggtgacacaaattagaaaggaagaagt
caaaatatcactgtttgcagatgatatgataatatatataagtgaagcta
aaaattctaccagagaactcctaaacctgataaacagcttcagtgaagta
gctggatataaaattaactcaaacaaattaatggcctttctgtacacaaa
ggataaacaggctgagaaagaaatttgggaaacaacacccttcacaatag
tcagactaatattcaatatatataaagaactccggaagttggactccaga
aaaccaaataaccctattaaaaatggggcacagagctaaaaaagaattct
caactgaggaataccgaatggctgagaagcacttgaaaaaatgttcaaca
cctttaatcatcagagaaatgtaaatcaaaacaaacctgagaatctactt
cacaccattagtcataatggctaagttcaaaaattcaggtgacagcagat
gctggcaagggtgtggagaaagagaaacatggctccattgctggtgggat
tgcaagctggtaaaaccattctggaaatcagtctgatggttcctcagaaa
attggacatagtactaccggaagatccagcaatccatctcctgggcatat
accccgaagatgttcccaacttgtaataaggacacatgctctactatgtt
tcttagcagccttatttataatagccagaagctggaaagaacccagatgt
tcctcaacagaagaatggatacacaaatgtgggtacaatttacaacaatg
cagtactacttcagcctaattaaagaatgaaatttattgggaattcttaa
gacaaatcaaatagaatataatccctgaagttagggtaaccccaattcac
aaaggaaatacacatgatatgcactttactggataaggtggaatatagcc
cagaaattaggaataccaagaaatcaattggcaaaaacaatgaacctcag
agagaaagagatcaacgtgcaatacttgttcctcttaatggggaaaccaa
aatatcccctagtgggaagaggagagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76672540_76673720
seq2: B6Ng01-232C03.b_42_1232

seq1  GAATTCTCAAAGAATCAGTAAAAATGAATTTTTTTGAAAAGGAAAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAGAATCAGTAAAAATGAATTTTTTTGAAAAGGAAAATTTT  50

seq1  TTGAATAAAATTTCAAACAGTTCAAAATGTTCTCCAGGGTTCCACACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAAATTTCAAACAGTTCAAAATGTTCTCCAGGGTTCCACACTAT  100

seq1  GTGTTTAAAGTAGAAGACAAAAACTCATTCTTAGGAGAGTACTATGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAAAGTAGAAGACAAAAACTCATTCTTAGGAGAGTACTATGATTT  150

seq1  TAAAAATGTTTTCACCGGGTGGTGATGACACTATGCCTTTAATCCCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTTTCACCGGGTGGTGATGACACTATGCCTTTAATCCCAGCA  200

seq1  CTTGGGAAGCAGAGGCAGGCAATTTTTTCTGAGTTTGAGGCCAGCCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAGCAGAGGCAGGCAATTTTTTCTGAGTTTGAGGCCAGCCTGGT  250

seq1  CTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCA  300

seq1  CTCTCGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  350

seq1  AATAAATGTTTTCAACAGCAGTTTTGAAATCAGCACCAAACATTCATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTTTTCAACAGCAGTTTTGAAATCAGCACCAAACATTCATAAA  400

seq1  GTGTGAAACTTTAAACAAACAACCTGGGTTTCTCTTATAATGTGAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAACTTTAAACAAACAACCTGGGTTTCTCTTATAATGTGAAAAAG  450

seq1  TAGGTCAGCTTCATTGGAAATGTAATAGTTTCATATCAGAAGTTCAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAGCTTCATTGGAAATGTAATAGTTTCATATCAGAAGTTCAAAGT  500

seq1  GGAACCAGGAACCTGTAAAAGGATGACCTTGGGAGAGCGTGATATACCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAGGAACCTGTAAAAGGATGACCTTGGGAGAGCGTGATATACCAT  550

seq1  CACTAATGTACTGCAACACAATGACACTGTTACAAGCAGTAGACAGTCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGTACTGCAACACAATGACACTGTTACAAGCAGTAGACAGTCGC  600

seq1  AAAGAGATGCAACCAGTCATGGTCAAAGATGTCTGTTAGTGCCTAAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGCAACCAGTCATGGTCAAAGATGTCTGTTAGTGCCTAAGAGG  650

seq1  GTCACTTCAGTCTCCTGGGACCACTATTCAACTAATTCCTGACGGAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTCAGTCTCCTGGGACCACTATTCAACTAATTCCTGACGGAGGGC  700

seq1  ATTCAAACAAGTTAAGCTCAAATAAAGTTTGCATTAAAATTGGCTCATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACAAGTTAAGCTCAAATAAAGTTTGCATTAAAATTGGCTCATTA  750

seq1  TCTTGTTAAATTTCAATAAAAGTTTCTGTTATTTTTGAAGTTACATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTAAATTTCAATAAAAGTTTCTGTTATTTTTGAAGTTACATTTTT  800

seq1  TTGTACTGTAATGGGGAAAAAAAAGTAGAGTCCAAATAGGAAATCTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTGTAATGGGGAAAAAAAAGTAGAGTCCAAATAGGAAATCTGTCA  850

seq1  GTGGATCTAGTGAGCTTTTATGCGGTGAATAGGAAGTAGCCTTTATATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCTAGTGAGCTTTTATGCGGTGAATAGGAAGTAGCCTTTATATTG  900

seq1  GTTGTGTACGAGTCTTCCCTTTAGATCAGGGTGACCAGGAATAGTACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTACGAGTCTTCCCTTTAGATCAGGGTGACCAGGAATAGTACACA  950

seq1  TGCCTTCTGAC-ATTGGTTACTATTCAAAGTGAAACCACAAAGGCTGGAC  999
      ||||||||||| || ||||||||||||||||| || ||||||||||||||
seq2  TGCCTTCTGACAATGGGTTACTATTCAAAGTG-AATCACAAAGGCTGGAC  999

seq1  CTGCAGGCTCATTTATTCTCCAGGGCTAAGCAATCTCCAGA--GGAAGAC  1047
      ||||||||||||||||||| |  ||||||||||||||||||  |||||||
seq2  CTGCAGGCTCATTTATTCTTCCAGGCTAAGCAATCTCCAGAAGGGAAGAC  1049

seq1  AGATGCA-TTTCCTGAGATAGGCTAGGCTTTTTATCAAAGAACAGCTGAT  1096
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  AGATGCATTTTCCTGAGATAGGCTAGGCTTTTTATC-AAGAACAGCTGAT  1098

seq1  AAT-GAC-TAATCAGAGCTGCCTGGTGGCTCGAGCTCACATCT-GTTTCA  1143
      ||| ||| || ||  ||||| || || |||||||||||||||| ||||| 
seq2  AATGGACTTATTCGAAGCTGGCTTGT-GCTCGAGCTCACATCTGGTTTCG  1147

seq1  AAGATTTG--CTG-AATACTAACA-GAAGA--CAGCTTTTGTTG  1181
      |||| |||  ||| |||||||||| |||||   |||||||||||
seq2  AAGAATTGGCCTGAAATACTAACACGAAGAACAAGCTTTTGTTG  1191


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