BAC Information

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BAC

Clone NameB6Ng01-234F14
Chromosome1 (Build37)
Map Location 98,581,473 - 98,582,620
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1833
Downstream geneSlco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346, D1Ertd622e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234F14.bB6Ng01-234F14.g
ACCGA046141GA046142
length1,1511,164
definitionB6Ng01-234F14.b B6Ng01-234F14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagtacttgagacagcacaaacaaaagcctttgcaagtgcaag
actgactgaatcccagcatcgagattttatgaggacattaaatccacttc
tagcaagagagctattgggaataattagtggttaggagacagaaacattt
tctctaagagtgtagcctctgataactttactctgctccagaagaaggcc
acgtatccaagaatccatgaacaatggaaacaagatttgatgtgtccagt
ttaaaactagagaaatggagctggaagcagaactagatcttggagagttg
ccagtgaatatgatcaagatatattctacaaaattctcaaagaaaaaata
taaatacacaaatataaatatgcataacacacacacacacgaaaatgtct
cgatggctgaatgtctgaatctttttttttaaaagacagttatgtttaac
acactttggagttcaattcttctgtaaatcattatccttcattttctgcc
aacacatttctatgaacctctgttttcactggacagatttctgctctttt
caaatcgttggtaaaatttaggggatttggaaacaatatacttgaaggcc
attcacaataaagtacagttgaaaatatgccacaaataattttgtttttt
gaatttgattgcaattcactggtacttgcccataaagagcaagttgctat
ttcttttctcttaagaatctgaggattaatgaaggaacagccaagagtga
acaggcctacgtagggtaaagaaaaatctcatatactatgggagaaaatt
attcatttatttttaaaatagatagcaatttggaatagtgttttctcagc
tttattacaaccgttggtaaaatgtgggtattacaaaggcaacatgacag
tgaagtttcctttaacatacacttgaagttttaggtcaaatcataattgc
tttattatgaaaaacaatatagaacaaaaggacatgtttttaggagaatg
caaaatatgccaaatggtatcaacatgtcagaacatctcaaaacacttag
gactatattacaatctatctgattgcagggaaaaccttttcaggttttaa
tattcgtttataagtacttgacagctaattatcagttatttacatgcagc
t
gaattctcacctgaggaatacggaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagtgaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcttca
gaaaattggacatagtactaccggagcatcccacaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacataaaatgtggtacatttacacaatg
gagtactattaaaaagaatgaatttatgaaattcctagccaaatggatgg
acctggagggcatcatcctgagtgaggtaacacattcacaaaggaactca
cacaatatgttctcactgataagtggatattagcccaaaacctaggatac
ccaagatataagatacaatttcctaaacacgtgaaactcaagaaaaatga
agactgaagtgtggacactatgcccctccttagaagtgggaacaaaacac
ccatggaaggagttacagagacaaagtttggagctgagatgaaaggatgg
accatgtagagactgccatatccagggatccaccccataatcagcatcca
tacgctgacaccattgcatacactagcaagattttgctgaaaggacccag
atgtagctgtctcttgtgagactatgcccgggcctagcaacacagaagtg
gatgctcacagtcagctaatggatggatcacagggctcccaatgagagct
agagaaagtacccaggagctaaagggatctgcacctatagtgaacaacat
atgactacagtacccggagctctgactctagctgcatatgtatcaagatg
actagtcggcatcactgaagagaaggccatgacactgcaacctttatatg
tccagtcaaggaacgctaggtcaatggatgattggtctacgcacatgcgc
tcgcgacctcatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98581473_98582620
seq2: B6Ng01-234F14.b_46_1196 (reverse)

seq1  AGCTGCATGTAAATAAATTAATAAATTAGCTGTCAAAAGTACTTATAAAA  50
      |||||||||||||||| | |   |||||||||||  ||||||||||||| 
seq2  AGCTGCATGTAAATAACTGA--TAATTAGCTGTC--AAGTACTTATAAAC  46

seq1  GAATATTTAAAACTGAAAA-GTTTTTCCTGCAATCAGATAGATTGTTATT  99
      ||||||| ||| ||||||| ||||| ||||||||||||||||||| || |
seq2  GAATATTAAAACCTGAAAAGGTTTTCCCTGCAATCAGATAGATTG-TAAT  95

seq1  ATAGTCCT-AGTGTTTTGAGATG-TCTGACATG-TGATA-CATTT-GCAT  144
      |||||||| |||||||||||||| ||||||||| ||||| ||||| ||||
seq2  ATAGTCCTAAGTGTTTTGAGATGTTCTGACATGTTGATACCATTTGGCAT  145

seq1  ATTTTGCATTCT-CTTAAAACATGT-CTTTTGTTCTATATTGTTTTTCAT  192
      |||||||||||| || ||||||||| ||||||||||||||||||||||||
seq2  ATTTTGCATTCTCCTAAAAACATGTCCTTTTGTTCTATATTGTTTTTCAT  195

seq1  AATAAAGCAATTATGATTTGACTTAAAACTTCAAGTGTATGTTTAAGGAA  242
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  AATAAAGCAATTATGATTTGACCTAAAACTTCAAGTGTATGTTAAAGGAA  245

seq1  ACTTCACTGTCATGTTGCCTTTGTAATACCCACATTTTACCAACGGTTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTGTCATGTTGCCTTTGTAATACCCACATTTTACCAACGGTTGT  295

seq1  AATAAAGCTGAGAAAACACTATTCCAAATTGCTATCTATTTTAAAAATAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGCTGAGAAAACACTATTCCAAATTGCTATCTATTTTAAAAATAA  345

seq1  ATGAATAATTTTCTCCCATAGTATATGAGATTTTTCTTTACCCTACGTAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATTTTCTCCCATAGTATATGAGATTTTTCTTTACCCTACGTAG  395

seq1  GCCTGTTCACTCTTGGCTGTTCCTTCATTAATCCTCAGATTCTTAAGAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTCACTCTTGGCTGTTCCTTCATTAATCCTCAGATTCTTAAGAGA  445

seq1  AAAGAAATAGCAACTTGCTCTTTATGGGCAAGTACCAGTGAATTGCAATC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAGCAACTTGCTCTTTATGGGCAAGTACCAGTGAATTGCAATC  495

seq1  AAATTCAAAAAACAAAATTATTTGTGGCATATTTTCAACTGTACTTTATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAAAAACAAAATTATTTGTGGCATATTTTCAACTGTACTTTATT  545

seq1  GTGAATGGCCTTCAAGTATATTGTTTCCAAATCCCCTAAATTTTACCAAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGCCTTCAAGTATATTGTTTCCAAATCCCCTAAATTTTACCAAC  595

seq1  GATTTGAAAAGAGCAGAAATCTGTCCAGTGAAAACAGAGGTTCATAGAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAAAAGAGCAGAAATCTGTCCAGTGAAAACAGAGGTTCATAGAAA  645

seq1  TGTGTTGGCAGAAAATGAAGGATAATGATTTACAGAAGAATTGAACTCCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGCAGAAAATGAAGGATAATGATTTACAGAAGAATTGAACTCCA  695

seq1  AAGTGTGTTAAACATAACTGTCTTTTAAAAAAAAAGATTCAGACATTCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTTAAACATAACTGTCTTTTAAAAAAAAAGATTCAGACATTCAG  745

seq1  CCATCGAGACATTTTCGTGTGTGTGTGTGTTATGCATATTTATATTTGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGAGACATTTTCGTGTGTGTGTGTGTTATGCATATTTATATTTGTG  795

seq1  TATTTATATTTTTTCTTTGAGAATTTTGTAGAATATATCTTGATCATATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATTTTTTCTTTGAGAATTTTGTAGAATATATCTTGATCATATT  845

seq1  CACTGGCAACTCTCCAAGATCTAGTTCTGCTTCCAGCTCCATTTCTCTAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCAACTCTCCAAGATCTAGTTCTGCTTCCAGCTCCATTTCTCTAG  895

seq1  TTTTAAACTGGACACATCAAATCTTGTTTCCATTGTTCATGGATTCTTGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACTGGACACATCAAATCTTGTTTCCATTGTTCATGGATTCTTGG  945

seq1  ATACGTGGCCTTCTTCTGGAGCAGAGTAAAGTTATCAGAGGCTACACTCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTGGCCTTCTTCTGGAGCAGAGTAAAGTTATCAGAGGCTACACTCT  995

seq1  TAGAGAAAATGTTTCTGTCTCCTAACCACTAATTATTCCCAATAGCTCTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAATGTTTCTGTCTCCTAACCACTAATTATTCCCAATAGCTCTC  1045

seq1  TTGCTAGAAGTGGATTTAATGTCCTCATAAAATCTCGATGCTGGGATTCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAAGTGGATTTAATGTCCTCATAAAATCTCGATGCTGGGATTCA  1095

seq1  GTCAGTCTTGCACTTGCAAAGGCTTTTGTTTGTGCTGTCTCAAGTACTAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCTTGCACTTGCAAAGGCTTTTGTTTGTGCTGTCTCAAGTACTAT  1145

seq1  GAATTC  1148
      ||||||
seq2  GAATTC  1151