BAC Information

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BAC

Clone NameB6Ng01-234K04
Chromosome1 (Build37)
Map Location 102,132,501 - 102,133,643
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295, EG666200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234K04.bB6Ng01-234K04.g
ACCGA046343GA046344
length6191,172
definitionB6Ng01-234K04.b B6Ng01-234K04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgacttattgtatagctagcctagtaggctcccagaaactta
gaatacccaagatacaatttgcaaacacaagaaaatcaagaacaaagacc
aaagtatggatacttcattcctccttagaatagggaacaaaatagggcgt
tatagagacaaagtttggagctaagatgaaaggatggaccatccagagtc
tacccaacccgtggatcaatcccataatcagcaaccaaacccagacacta
ttgcatatgacagcaagattttgctgaaaggaccctgacatagctgtctc
gagtgaggctatgccagtgcctggcaaatacagaagtatttgtacagtat
agatacagtatagatcacagtcttctataggatagtacacagggccccca
atggaggagctagagaaagtacccaaggagctgaagggatctgcaaccct
ataggtggaacaacaatatgaactaaccagtaccccccggagctcttgtc
tctagctgcatatgtagcagaagatggcctagtcagccatcaaatggaag
ataggccccttggtcttgcaaactttatatgccccagtacaggggaacac
cagggccaagaagtgggag

gaattccaaacattcttttgaacagccatttaggaaaacaaaacaaacaa
aaacacaaacaagctgagggctcaattatatggatgaacacatgtgtact
atttataaaactttataaaaatgtaattaaatgttgtttttaatatgtgt
agaaattaattattctgtagaattcatatatactgaattatttctgtacg
agaattacactacagaaagcatggcctggataactcttctttgatatccc
tgagactgtttgccattatttggaaaagtcttggctcaagacccccaaaa
ccaagtgtggagcccaaaggagatttacataccccaaaggacagaagcca
cggaataagagacaaagacaggagatagaagatggaggagggaaagagaa
caaaggagagtagagaaaatgggtaaaggaaagggatactgagaatttat
tcagggaagggaggggtcagacaatggacttctgaatagagagaagagag
atgtggtacataggaaagtgacagtttataaaggtacaagggaaagaaac
cccatgtacagatgaggtgtttcattttaattgggcatgttaactatatg
agccaaaggaggtttttcattgatggctattagtacattgatagctagac
tttggtagtcaccctcagaaggaggaaatagcccttgggggctagcttca
ggattgtaatctaaccagtttttatccaggtagacagaaaagggtaaggt
tttccagagccatgctcattatcttcaagttggacaaagtcccttcagcc
acatgagaactctgggataggttagaaactgtgtttggagatcagggcct
gaaacaagaatagagatctgtacactggggggcatattatttccccacca
tatccacaaaaagaccagatataaagtttttccctgggtacttacgtaag
gaaactgagtcatcctttttctttcccttagcctgagatgtgtgactctg
ctgaaaaacctaaatccttgcgcgcctggactcgacagcaagtaagaagg
cttgcaaacaagaattccttctggcacaacgttttatttgggggagcttg
aattaacaggagcaaagagaaactcagctcagtattgggtgctgctttat
ttaggccttagagagggcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102132501_102133643
seq2: B6Ng01-234K04.g_66_1237 (reverse)

seq1  ACATG-CCTCTCT-AGGCCTATAT-AAGCAGCA-CCAATTCTGGGCTTGG  46
      ||||| ||||||| ||||||| || |||||||| ||||| ||| |||  |
seq2  ACATGCCCTCTCTAAGGCCTAAATAAAGCAGCACCCAATACTGAGCTGAG  50

seq1  GGTCTCTTTGCCTCTGT--AATCAAGCTCTCCCAA--TAAACG-TGTG-C  90
        |||||||||  ||||  | |||||||| |||||   ||||| |||| |
seq2  TTTCTCTTTGCTCCTGTTAATTCAAGCTCCCCCAAATAAAACGTTGTGCC  100

seq1  AGAAGG-ATTCT--GTTGCA--GCATCTTACTTGCTGGTCGAGTCCA-GC  134
      |||||| |||||   |||||   | ||||||||||| |||||||||| ||
seq2  AGAAGGAATTCTTGTTTGCAAGCCTTCTTACTTGCT-GTCGAGTCCAGGC  149

seq1  GCGCAA-GATCTAGG-TTTTCAGCAGAGTCACACATCTCAGGCT-AGGGA  181
      |||||| ||| |||| |||||||||||||||||||||||||||| |||||
seq2  GCGCAAGGATTTAGGTTTTTCAGCAGAGTCACACATCTCAGGCTAAGGGA  199

seq1  A--GAAAAGGATGACTCAGTTT-CTTACGT-AGTACC--AGGAAAAAC-T  224
      |   |||||||||||||||||| ||||||| ||||||   |||||||| |
seq2  AAGAAAAAGGATGACTCAGTTTCCTTACGTAAGTACCCAGGGAAAAACTT  249

seq1  TATATCTGGTCTTTTTGTGGATATGGTGGGGAA--TATATG--CCCCAGT  270
      |||||||||||||||||||||||||||||||||   |||||  |||||||
seq2  TATATCTGGTCTTTTTGTGGATATGGTGGGGAAATAATATGCCCCCCAGT  299

seq1  GTACAGATCTCTATTCTTGTTTCAGGCCCTGATCTCCAAACACAGTTTCT  320
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGATCTCTATTCTTGTTTCAGGCCCTGATCTCCAAACACAGTTTCT  349

seq1  AACCTATCCCAGAGTTCTCATGTGGCTGAAGGGACTTTGTCCAACTTGAA  370
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATCCCAGAGTTCTCATGTGGCTGAAGGGACTTTGTCCAACTTGAA  399

seq1  GATAATGAGCATGGCTCTGGAAAACCTTACCCTTTTCTGTCTACCTGGAT  420
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGAGCATGGCTCTGGAAAACCTTACCCTTTTCTGTCTACCTGGAT  449

seq1  AAAAACTGGTTAGATTACAATCCTGAAGCTAGCCCCCAAGGGCTATTTCC  470
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGGTTAGATTACAATCCTGAAGCTAGCCCCCAAGGGCTATTTCC  499

seq1  TCCTTCTGAGGGTGACTACCAAAGTCTAGCTATCAATGTACTAATAGCCA  520
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGAGGGTGACTACCAAAGTCTAGCTATCAATGTACTAATAGCCA  549

seq1  TCAATGAAAAACCTCCTTTGGCTCATATAGTTAACATGCCCAATTAAAAT  570
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAAAACCTCCTTTGGCTCATATAGTTAACATGCCCAATTAAAAT  599

seq1  GAAACACCTCATCTGTACATGGGGTTTCTTTCCCTTGTACCTTTATAAAC  620
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACCTCATCTGTACATGGGGTTTCTTTCCCTTGTACCTTTATAAAC  649

seq1  TGTCACTTTCCTATGTACCACATCTCTCTTCTCTCTATTCAGAAGTCCAT  670
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTTCCTATGTACCACATCTCTCTTCTCTCTATTCAGAAGTCCAT  699

seq1  TGTCTGACCCCTCCCTTCCCTGAATAAATTCTCAGTATCCCTTTCCTTTA  720
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGACCCCTCCCTTCCCTGAATAAATTCTCAGTATCCCTTTCCTTTA  749

seq1  CCCATTTTCTCTACTCTCCTTTGTTCTCTTTCCCTCCTCCATCTTCTATC  770
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTCTCTACTCTCCTTTGTTCTCTTTCCCTCCTCCATCTTCTATC  799

seq1  TCCTGTCTTTGTCTCTTATTCCGTGGCTTCTGTCCTTTGGGGTATGTAAA  820
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTTGTCTCTTATTCCGTGGCTTCTGTCCTTTGGGGTATGTAAA  849

seq1  TCTCCTTTGGGCTCCACACTTGGTTTTGGGGGTCTTGAGCCAAGACTTTT  870
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTGGGCTCCACACTTGGTTTTGGGGGTCTTGAGCCAAGACTTTT  899

seq1  CCAAATAATGGCAAACAGTCTCAGGGATATCAAAGAAGAGTTATCCAGGC  920
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATGGCAAACAGTCTCAGGGATATCAAAGAAGAGTTATCCAGGC  949

seq1  CATGCTTTCTGTAGTGTAATTCTCGTACAGAAATAATTCAGTATATATGA  970
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTCTGTAGTGTAATTCTCGTACAGAAATAATTCAGTATATATGA  999

seq1  ATTCTACAGAATAATTAATTTCTACACATATTAAAAACAACATTTAATTA  1020
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAGAATAATTAATTTCTACACATATTAAAAACAACATTTAATTA  1049

seq1  CATTTTTATAAAGTTTTATAAATAGTACACATGTGTTCATCCATATAATT  1070
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATAAAGTTTTATAAATAGTACACATGTGTTCATCCATATAATT  1099

seq1  GAGCCCTCAGCTTGTTTGTGTTTTTGTTTGTTTTGTTTTCCTAAATGGCT  1120
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTCAGCTTGTTTGTGTTTTTGTTTGTTTTGTTTTCCTAAATGGCT  1149

seq1  GTTCAAAAGAATGTTTGGAATTC  1143
      |||||||||||||||||||||||
seq2  GTTCAAAAGAATGTTTGGAATTC  1172


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