BAC Information

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BAC

Clone NameB6Ng01-234O13
Chromosome1 (Build37)
Map Location 115,328,487 - 115,329,637
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234O13.bB6Ng01-234O13.g
ACCGA046528GA046529
length1,1571,140
definitionB6Ng01-234O13.b B6Ng01-234O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttaaaggctacacagttgccctattgtgcatgcacacaaaa
ccagtccaggccagattgacccatcattcatttgtttcagggtttgaccc
aggattgtctgaataatgataagatagtatctaagtttgctacagtagtg
attcatttccattgtttaaagcaagtgcagccttatacaagtggaagaca
aaggctgaaaagtagctactaggttcactgttaaaaaaatgcatgcattg
tctataccaattgaagtcaaaagtttcttgctattccctatgcttgcata
cctcaaagacatcagaggagggagacagagagattgtcccttacactcat
gaatatgagctgatccccaaaactgctggcaatgggacaacatggagaat
ccactaaggaaaaggtgccattaaggagatccctctaaatggtttgatat
tctaatatttggctctcctaactccagactcacacaccacctgcaaagtc
aaagaaagcattgaaccatattccaccatgcttactctatctatgccttc
tgtgtaatctgagtctccaggtcatgtttctccattacggtgggtattaa
acaagatttgcttgcttgtctccacaaaatctcaggacaattaaccactg
tatatgttttccatgtaatagttaatcttgattgttagatggacatggta
tagattacagaatctataaggcaagcctctgagcatgtctatgaggttgg
gttaattgcattgagaagtcataagccaatggtaggtatcactatgcaca
atttgaggtcactaacagaataatatgaaagtgagctggcaccagtattt
atccctcactgcttccagaccgtgaattcaacataacatgctgcctcttg
ccactgccattatactgtccagtcagaatagggaatcactgtgcaaacac
aactctgggtgtgtgtacaagaaaggggaaggtttttttttttaagagta
gaccaaccctgattgtggaaagcaccattgggttgggatcctatcctctg
aaaaaataccagagtttgagcagagccaccagcatgtatcctcaatgttt
tcctgacatggatgcaatatggccatgtgtgagcaccctgttgacataca
cactgtc

gaattcactcaaatgagaataaattctggttataaatacttcttattgtg
ttcttgatgtatatttttttgactcttttggatattttctttatttacat
ttcaaatgttttcccttttcctggtttcccctctgaaaaccccttcccct
atcgcattccccctccccctgatctccaccccatctactcctgcttccag
gccctggcattcccttcactggggcatagacccttcacaggaccaagggc
ctcttctctcattgttgtcacattaggccatcctctgctacatatgaagc
tggagccatgagtcccaccatgtgtactctttggttggtggtttagtccc
tgagagctccggcagtactggttagttcaaattgttgttcctcctatggg
gctgcaaaacctctcaactccttaggtcctcactctagttccttcattgg
gtaccctgtactcagtcccatggatgactgtgagcatccacttctgtatt
tgtcagacactggcagagcctctcaggatatcgctatatcaggttcctgt
tagcaagcacttgccatccacaatagtgtctgggtttggtgattgtgtat
gggatggatccccagatggggcagtctctggacggtcattccttcagtct
ctgccccatactttgtctctgtaactccttccattggtgtagtgttcccc
cttcaaagacccacttggacttgagctttataaaaggaaataagaatggg
tcaattcacattctttctacatgctaactgctagttgagccagcaccatt
tgttgaaaatgctgtcttttttttccactgaatagttttaggatactttg
tagaagatcaagtgataatgtgtgtgtggatccatttctgggtctttcaa
ttctattccattgatccacctgtcctgtcacttgtaccagtaccatgcag
cttttatcaccaatttgcttctgtagtacggcttgaggtcagaaaaggag
tgaatcaccaaagttcttttatttgttagagatagttttcgctagcctgg
gtttttggttattcagattgaatttgaaattcgtcttttctaatctataa
taagaatgagcagacactctatgagacacggcatatgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115328487_115329637
seq2: B6Ng01-234O13.b_50_1206

seq1  GAATTCTCCTTAAAGGCTACACAGTTGCCCTATTGTGCATGCACACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAAAGGCTACACAGTTGCCCTATTGTGCATGCACACAAAA  50

seq1  CCAGTCCAGGCCAGATTGACCCATCATTCATTTGTTTCAGGGTTTGACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCAGGCCAGATTGACCCATCATTCATTTGTTTCAGGGTTTGACCC  100

seq1  AGGATTGTCTGAATAATGATAAGATAGTATCTAAGTTTGCTACAGTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTCTGAATAATGATAAGATAGTATCTAAGTTTGCTACAGTAGTG  150

seq1  ATTCATTTCCATTGTTTAAAGCAAGTGCAGCCTTATACAAGTGGAAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTCCATTGTTTAAAGCAAGTGCAGCCTTATACAAGTGGAAGACA  200

seq1  AAGGCTGAAAAGTAGCTACTAGGTTCACTGTTAAAAAAATGCATGCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAAAAGTAGCTACTAGGTTCACTGTTAAAAAAATGCATGCATTG  250

seq1  TCTATACCAATTGAAGTCAAAAGTTTCTTGCTATTCCCTATGCTTGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACCAATTGAAGTCAAAAGTTTCTTGCTATTCCCTATGCTTGCATA  300

seq1  CCTCAAAGACATCAGAGGAGGGAGACAGAGAGATTGTCCCTTACACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGACATCAGAGGAGGGAGACAGAGAGATTGTCCCTTACACTCAT  350

seq1  GAATATGAGCTGATCCCCAAAACTGCTGGCAATGGGACAACATGGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGAGCTGATCCCCAAAACTGCTGGCAATGGGACAACATGGAGAAT  400

seq1  CCACTAAGGAAAAGGTGCCATTAAGGAGATCCCTCTAAATGGTTTGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAGGAAAAGGTGCCATTAAGGAGATCCCTCTAAATGGTTTGATAT  450

seq1  TCTAATATTTGGCTCTCCTAACTCCAGACTCACACACCACCTGCAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATTTGGCTCTCCTAACTCCAGACTCACACACCACCTGCAAAGTC  500

seq1  AAAGAAAGCATTGAACCATATTCCACCATGCTTACTCTATCTATGCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCATTGAACCATATTCCACCATGCTTACTCTATCTATGCCTTC  550

seq1  TGTGTAATCTGAGTCTCCAGGTCATGTTTCTCCATTACGGTGGGTATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATCTGAGTCTCCAGGTCATGTTTCTCCATTACGGTGGGTATTAA  600

seq1  ACAAGATTTGCTTGCTTGTCTCCACAAAATCTCAGGACAATTAACCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTGCTTGCTTGTCTCCACAAAATCTCAGGACAATTAACCACTG  650

seq1  TATATGTTTTCCATGTAATAGTTAATCTTGATTGTTAGATGGACATGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTCCATGTAATAGTTAATCTTGATTGTTAGATGGACATGGTA  700

seq1  TAGATTACAGAATCTATAAGGCAAGCCTCTGAGCATGTCTATGAGGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTACAGAATCTATAAGGCAAGCCTCTGAGCATGTCTATGAGGTTGG  750

seq1  GTTAATTGCATTGAGAAGTCATAAGCCAATGGTAGGTATCACTATGCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTGCATTGAGAAGTCATAAGCCAATGGTAGGTATCACTATGCACA  800

seq1  ATTTGAGGTCACTAACAGAATAATATGAAAGTGAGCTGGCACCAGTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGTCACTAACAGAATAATATGAAAGTGAGCTGGCACCAGTATTT  850

seq1  ATCCCTCACTGCTTCCAGACCGTGAATTCAACATAACATGCTGCCTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCACTGCTTCCAGACCGTGAATTCAACATAACATGCTGCCTCTTG  900

seq1  CCACTGCCATTATACTGTCCAGTCAGAATAGGGAATCACTGTGCAAACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCATTATACTGTCCAGTCAGAATAGGGAATCACTGTGCAAACAC  950

seq1  AACTCTGGGTGTGTGTACAAGAAAGGGGAAGGTTTTTTTTTTTAAGAGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGTGTGTGTACAAGAAAGGGGAAGGTTTTTTTTTTTAAGAGTA  1000

seq1  GACCAACCCTGATTGTGGAAAGCACCATTGG--TTGGATCCTAATCTCTG  1048
      |||||||||||||||||||||||||||||||  | ||||||||  |||||
seq2  GACCAACCCTGATTGTGGAAAGCACCATTGGGTTGGGATCCTATCCTCTG  1050

seq1  AAAAAATA-CAGAG-TTGAGCAGAG-CACCAGCATGTATCCCTCCATG-T  1094
      |||||||| ||||| |||||||||| ||||||||||||| |||| ||| |
seq2  AAAAAATACCAGAGTTTGAGCAGAGCCACCAGCATGTAT-CCTCAATGTT  1099

seq1  TTCTTGACAATGGATGCAATATGGCCATGTGT-AGCACCCTGTTGACAT-  1142
      ||| |||| ||||||||||||||||||||||| |||||||||||||||| 
seq2  TTCCTGAC-ATGGATGCAATATGGCCATGTGTGAGCACCCTGTTGACATA  1148

seq1  CACACTGTC  1151
      |||||||||
seq2  CACACTGTC  1157


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