BAC Information

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BAC

Clone NameB6Ng01-237O14
Chromosome1 (Build37)
Map Location 46,830,046 - 46,989,433
singlet/doubletdoublet
Overlap geneSlc39a10
Upstream geneWdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855
Downstream geneEG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237O14.bB6Ng01-237O14.g
ACCGA048748GA048749
length9781,100
definitionB6Ng01-237O14.b B6Ng01-237O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,988,876 - 46,989,433)(46,830,046 - 46,831,094)
sequence
tctaagatgggagcctttcaaagactcatacgatgaaatcattttagata
taaaagagattgccatgttgtatgtgataggtctctagtgctatgggatg
aatttgttccatatgatagttttctaaatatgtcatcctttttggataaa
ataatggaagcatatggtcaaaacttgaaaaggcacacaatcctgaacag
tgagcaataaatctctacttcctgccatgcagttagcatccctgaaggaa
accactgttttaagttcttccagagatattcaaaacatcctttgacatcc
ttctagtcaaaacttaaacatgataatgtccaagaggtcatgaattatta
cattttctaattatctaactagtgagttaaaacaacaaaaaacaacatct
taagttgcacagctgactatgtaatggaaaatgaccttaaagttctgatc
cttttgccgctacataggtttacggtggtggaattgaaagtgtatgttag
tgttcctgattatgcagtgctgggagtggaactcagggtcttttacctga
gactagcactctaccaagtgagttacatccttagctccaaagttagttat
ctaggcaagttaattaatgtattcctaaatttctccatttatttgatgga
aataattggaccttccaggtgggattgtcagaattacatgaggtaataca
tcaacaatcaatgatgaagctatttgggaagacttaaagaggtagagcct
tgctgaaggaagtatgtcattagagatcacgttaagagtttttatcctaa
ccatatgtctaggtcattttctctacttcatgtttacagctgaatctgtg
ttatttcagcttcctgtagatagaatctgtatgtactgtgtggaagcagc
atttctcaataaaaacgcctatgggccaatgagctcaggcaggactagac
gtggacaaccaggaaaaagagataggat

gaattctatgttgttagcagctctcactttctaatgtaagatattccaga
ctcatcatggaatcttcatgattctgtcacagaactctgctttttctgag
tggttaatggtattggagaactaaatggatattagatgacttcctcggta
cataaatatagacacagccaggaatagtggtgcacaccttgaatcccagc
actgtgtaaagggattacagcatgcagatctttgtgagtttgaggtcaac
ctggtttgtgtattgagttctaggacagacagagctaaatggagagaacc
tatgaaaagcaaaaaaacaacaaaagttaaagaaagaaaatctataggca
tgcaaacatgcaaatatacgtgcatatcctacaggcactctagacatgaa
gactacatgccagaattttcagtttcacagcatcttccacattcattctt
gtctgtcttcacttcatgtttgtcttttcttttacattaagacatctgga
ttccaacaattaattattgacttaatcaatgattcaatatatgcaaaata
attcagagtaatactggcatgtttagtcaatgtctttagtcatttatctc
tcttttagtctgtacctctcttttatcagatctgttttattctttctcat
ttcttttttggttgattttatatctccctgttttctattttccttttcaa
ttttattctgtgaagggaccttatgctgtgaaataaaatttagtcctttc
tgtgatgtttctgggttttgttaaataataaagtatcctatagttacttc
cagttgcaagaagagattgagtcagaaattgggaggtatgacacaatatg
ttaattactacgtcgctgttattacaaatgcaggctttggattctccaca
ctctcacagtgtccctggctggtgggtggcagcctatcagggaagagaat
gagctgccatcctcttctcatgactgtgacacagctcgcagctgtgttac
cattcacttcagagtgttttgaaacagatgggcagatatttctgatccta
gcctggatttttttgattctgggcaatgattgaggtaatactccccctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46988876_46989433
seq2: B6Ng01-237O14.b_58_615 (reverse)

seq1  TGCTAGTCTCAGGTAAAAGACCCTGAGTTCCACTCCCAGCACTGCATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTCTCAGGTAAAAGACCCTGAGTTCCACTCCCAGCACTGCATAAT  50

seq1  CAGGAACACTAACATACACTTTCAATTCCACCACCGTAAACCTATGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACACTAACATACACTTTCAATTCCACCACCGTAAACCTATGTAGC  100

seq1  GGCAAAAGGATCAGAACTTTAAGGTCATTTTCCATTACATAGTCAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGGATCAGAACTTTAAGGTCATTTTCCATTACATAGTCAGCTGT  150

seq1  GCAACTTAAGATGTTGTTTTTTGTTGTTTTAACTCACTAGTTAGATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTAAGATGTTGTTTTTTGTTGTTTTAACTCACTAGTTAGATAATT  200

seq1  AGAAAATGTAATAATTCATGACCTCTTGGACATTATCATGTTTAAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTAATAATTCATGACCTCTTGGACATTATCATGTTTAAGTTTT  250

seq1  GACTAGAAGGATGTCAAAGGATGTTTTGAATATCTCTGGAAGAACTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAGGATGTCAAAGGATGTTTTGAATATCTCTGGAAGAACTTAAA  300

seq1  ACAGTGGTTTCCTTCAGGGATGCTAACTGCATGGCAGGAAGTAGAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTTTCCTTCAGGGATGCTAACTGCATGGCAGGAAGTAGAGATTT  350

seq1  ATTGCTCACTGTTCAGGATTGTGTGCCTTTTCAAGTTTTGACCATATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCACTGTTCAGGATTGTGTGCCTTTTCAAGTTTTGACCATATGCT  400

seq1  TCCATTATTTTATCCAAAAAGGATGACATATTTAGAAAACTATCATATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTTTATCCAAAAAGGATGACATATTTAGAAAACTATCATATGG  450

seq1  AACAAATTCATCCCATAGCACTAGAGACCTATCACATACAACATGGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTCATCCCATAGCACTAGAGACCTATCACATACAACATGGCAAT  500

seq1  CTCTTTTATATCTAAAATGATTTCATCGTATGAGTCTTTGAAAGGCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTATATCTAAAATGATTTCATCGTATGAGTCTTTGAAAGGCTCCC  550

seq1  ATCTTAGA  558
      ||||||||
seq2  ATCTTAGA  558


seq1: chr1_46830046_46831094
seq2: B6Ng01-237O14.g_124_1164

seq1  GAATCTTCATGATTCTGTCACAGAACTCTGCTTTTTCTGAGTGGTTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCATGATTCTGTCACAGAACTCTGCTTTTTCTGAGTGGTTAATG  50

seq1  GTATTGGAGAACTAAATGGATATTAGATGACTTCCTCGGTACATAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGAGAACTAAATGGATATTAGATGACTTCCTCGGTACATAAATAT  100

seq1  AGACACAGCCAGGAATAGTGGTGCACACCTTGAATCCCAGCACTGTGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGCCAGGAATAGTGGTGCACACCTTGAATCCCAGCACTGTGTAA  150

seq1  AGGGATTACAGCATGCAGATCTTTGTGAGTTTGAGGTCAACCTGGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTACAGCATGCAGATCTTTGTGAGTTTGAGGTCAACCTGGTTTGT  200

seq1  GTATTGAGTTCTAGGACAGACAGAGCTAAATGGAGAGAACCTATGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAGTTCTAGGACAGACAGAGCTAAATGGAGAGAACCTATGAAAAG  250

seq1  CAAAAAAACAACAAAAGTTAAAGAAAGAAAATCTATAGGCATGCAAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACAACAAAAGTTAAAGAAAGAAAATCTATAGGCATGCAAACAT  300

seq1  GCAAATATACGTGCATATCCTACAGGCACTCTAGACATGAAGACTACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATACGTGCATATCCTACAGGCACTCTAGACATGAAGACTACATG  350

seq1  CCAGAATTTTCAGTTTCACAGCATCTTCCACATTCATTCTTGTCTGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTTTCAGTTTCACAGCATCTTCCACATTCATTCTTGTCTGTCTT  400

seq1  CACTTCATGTTTGTCTTTTCTTTTACATTAAGACATCTGGATTCCAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCATGTTTGTCTTTTCTTTTACATTAAGACATCTGGATTCCAACAA  450

seq1  TTAATTATTGACTTAATCAATGATTCAATATATGCAAAATAATTCAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATTGACTTAATCAATGATTCAATATATGCAAAATAATTCAGAGT  500

seq1  AATACTGGCATGTTTAGTCAATGTCTTTAGTCATTTATCTCTCTTTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGGCATGTTTAGTCAATGTCTTTAGTCATTTATCTCTCTTTTAGT  550

seq1  CTGTACCTCTCTTTTATCAGATCTGTTTTATTCTTTCTCATTTCTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCTCTCTTTTATCAGATCTGTTTTATTCTTTCTCATTTCTTTTTT  600

seq1  GGTTGATTTTATATCTCCCTGTTTTCTATTTTCCTTTTCAATTTTATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTTTATATCTCCCTGTTTTCTATTTTCCTTTTCAATTTTATTCT  650

seq1  GTGAAGGGACCTTATGCTGTGAAATAAAATTTAGTCCTTTCTGTGATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGGACCTTATGCTGTGAAATAAAATTTAGTCCTTTCTGTGATGTT  700

seq1  TCTGGGTTTTGTTAAATAATAAAGTATCCTATAGTTACTTCCAGTTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTTTGTTAAATAATAAAGTATCCTATAGTTACTTCCAGTTGCAA  750

seq1  GAAGAGATTGAGTCAGAAATTGGGAGGTATGACACAATATGTTAATTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATTGAGTCAGAAATTGGGAGGTATGACACAATATGTTAATTACT  800

seq1  ACGTCGCTGTTATTACAAATGCAGGCTTTGGATTCTCCACACTCTCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACGTCGCTGTTATTACAAATGCAGGCTTTGGATTCTCCACACTCTCA-CA  849

seq1  GTGTCCCTGGCTGGTGGGTGGCAGCCTATCAGGGGAAGAGAATGAGCTGC  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGTCCCTGGCTGGTGGGTGGCAGCCTATCA-GGGAAGAGAATGAGCTGC  898

seq1  CATCCTCCTTCTCATGACCTGTGACACAGCTCGCAGCTGTTGGTACCATT  950
      |||||| |||||||||| ||||||||||||||||||||| || |||||||
seq2  CATCCT-CTTCTCATGA-CTGTGACACAGCTCGCAGCTG-TGTTACCATT  945

seq1  CACTTCAGAGTGGTTTTGAAACAGGAAGGGGCAGATATTTCTGATCTTAG  1000
      ||||||||||| ||||||||||||  | |||||||||||||||||| |||
seq2  CACTTCAGAGT-GTTTTGAAACAG--ATGGGCAGATATTTCTGATCCTAG  992

seq1  CTGGGAATTTTTTGA-TCTGGGCATTGGTTTGAGGTAATACTCCCCCTCG  1049
      |  ||| |||||||| |||||||| | | |||||||||||||||||||||
seq2  CCTGGATTTTTTTGATTCTGGGCAAT-GATTGAGGTAATACTCCCCCTCG  1041


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