BAC Information

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BAC

Clone NameB6Ng01-243H09
Chromosome1 (Build37)
Map Location 68,524,070 - 68,525,135
singlet/doubletsinglet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243H09.bB6Ng01-243H09.g
ACCGA052839GA052840
length1,1751,083
definitionB6Ng01-243H09.b B6Ng01-243H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaagggtgttgtttccctatttcttctcagcctgttt
attctttgtgtagagaacgcccattgacttgtttgagttattttatatcc
agcctactttcacgaggctgtttatcagcttaggagtctctcgttgcact
ttagggtcactttaatatacttcatatcaatctgccaagtgtatatttgg
gacttccttccttttccacaaaatg

gaattcagatcaaattcaaaatgggctttcaaaacttataaaaataacta
ttaaaaaatcaatatttgggatgggggctataacttattcagtgaagaac
ctgctgtataagcttaaggagctgactagatctgaactgggaaccccatg
ttgatgcgtgaatgatgatatcgagccaacttacacttagattttttttt
caaattgtttaactactttgcataggggcagcacaacttgataatttatt
gttaaagaaaagcatacacagggtactctgaagaattctgcatgtaaatc
tcacccaattaaataagcactcactttttcagagtgctttgtaaaatcag
acagacattttaataatggctcttagtgattattcatgaatgaattatta
attacctttcctgactaaaaatatcattccatgctgacaaaataaaattt
ccccaaatgagtatatatatatacatatatatatatatgtatatatatac
taatcattagtagtgtctgctataagtcagtatttgatctagttgtaatt
ggtgctcaataatttagcacaatttcacatcacaaatgacaacattcaat
attatggattattgtgatatacaaaaaagtattgtctgataattattttg
cagtgagcccgataatacaattatggatgaacctatatttggctttgcat
aaaaagctatgaaatgtcaatgaggaaaaatattttcttcagaatttctc
tagagcacactagtgactaattgtttctaaaaatccggactattgttatg
atgttctgagttaagactgcaaaaatcccttttgtagacaaagtgtgtca
aatgatgaaagaatttatttttactgggtaatgttcaatgaaaaataatt
aaggaaccgtgatagaacacatttcaagtgtaaggtaagatatttaaaga
taagcatgtttcagtcaggttttccccctttaaagaaattcattaatctt
aaccttacataaaaacattacaagtaaacttccataaaaataaatgaatg
cctctattctttccttgaatggatgggccttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68524070_68525135
seq2: B6Ng01-243H09.g_66_1148

seq1  GAATTCAGATCAAATTCAAAATGGGCTTTCAAAACTTATAAAAATAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCAAATTCAAAATGGGCTTTCAAAACTTATAAAAATAACTA  50

seq1  TTAAAAAATCAATATTTGGGATGGGGGCTATAACTTATTCAGTGAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATCAATATTTGGGATGGGGGCTATAACTTATTCAGTGAAGAAC  100

seq1  CTGCTGTATAAGCTTAAGGAGCTGACTAGATCTGAACTGGGAACCCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTATAAGCTTAAGGAGCTGACTAGATCTGAACTGGGAACCCCATG  150

seq1  TTGATGCGTGAATGATGATATCGAGCCAACTTACACTTAGATTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCGTGAATGATGATATCGAGCCAACTTACACTTAGATTTTTTTTT  200

seq1  CAAATTGTTTAACTACTTTGCATAGGGGCAGCACAACTTGATAATTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTTTAACTACTTTGCATAGGGGCAGCACAACTTGATAATTTATT  250

seq1  GTTAAAGAAAAGCATACACAGGGTACTCTGAAGAATTCTGCATGTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGAAAAGCATACACAGGGTACTCTGAAGAATTCTGCATGTAAATC  300

seq1  TCACCCAATTAAATAAGCACTCACTTTTTCAGAGTGCTTTGTAAAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAATTAAATAAGCACTCACTTTTTCAGAGTGCTTTGTAAAATCAG  350

seq1  ACAGACATTTTAATAATGGCTCTTAGTGATTATTCATGAATGAATTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATTTTAATAATGGCTCTTAGTGATTATTCATGAATGAATTATTA  400

seq1  ATTACCTTTCCTGACTAAAAATATCATTCCATGCTGACAAAATAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTTTCCTGACTAAAAATATCATTCCATGCTGACAAAATAAAATTT  450

seq1  CCCCAAATGAGTATATATATATACATATATATATATATGTATATATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGAGTATATATATATACATATATATATATATGTATATATATAC  500

seq1  TAATCATTAGTAGTGTCTGCTATAAGTCAGTATTTGATCTAGTTGTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTAGTAGTGTCTGCTATAAGTCAGTATTTGATCTAGTTGTAATT  550

seq1  GGTGCTCAATAATTTAGCACAATTTCACATCACAAATGACAACATTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAATAATTTAGCACAATTTCACATCACAAATGACAACATTCAAT  600

seq1  ATTATGGATTATTGTGATATACAAAAAAGTATTGTCTGATAATTATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGATTATTGTGATATACAAAAAAGTATTGTCTGATAATTATTTTG  650

seq1  CAGTGAGCCCGATAATACAATTATGGATGAACCTATATTTGGCTTTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCCCGATAATACAATTATGGATGAACCTATATTTGGCTTTGCAT  700

seq1  AAAAAGCTATGAAATGTCAATGAGGAAAAATATTTTCTTCAGAATTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTATGAAATGTCAATGAGGAAAAATATTTTCTTCAGAATTTCTC  750

seq1  TAGAGCACACTAGTGACTAATTG-TTCTAAAAATCCGGACTATTGTTATG  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGAGCACACTAGTGACTAATTGTTTCTAAAAATCCGGACTATTGTTATG  800

seq1  ATGTTCTGAGTTAAGACTGCAAAAATCCC-TTTGTAGACAAAGTGTGTCA  848
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGTTCTGAGTTAAGACTGCAAAAATCCCTTTTGTAGACAAAGTGTGTCA  850

seq1  AATGATGAAAGAATTTATTTTTACT-GGTAATGTTCAATGAAAAATAATT  897
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATGATGAAAGAATTTATTTTTACTGGGTAATGTTCAATGAAAAATAATT  900

seq1  AAGGAACCGTGATAGAACACA-TTCAAGTGTAAGGTAAGATATTTAAAGA  946
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGGAACCGTGATAGAACACATTTCAAGTGTAAGGTAAGATATTTAAAGA  950

seq1  TAAGCATG-TTCAGTCA-GTTTTCCCCC-TTAAAGAAA-TCAT--ATCTT  990
      |||||||| |||||||| |||||||||| ||||||||| ||||  |||||
seq2  TAAGCATGTTTCAGTCAGGTTTTCCCCCTTTAAAGAAATTCATTAATCTT  1000

seq1  AAC--TACATAAAAACATTTACAAGTAAACTT-CATAAAATAAAAATGAA  1037
      |||  |||||||||||| |||||||||||||| ||||||| | |||||||
seq2  AACCTTACATAAAAACA-TTACAAGTAAACTTCCATAAAA-ATAAATGAA  1048

seq1  TG-CTCTAT--CTTCCTTGA--TGATGGG-CTTAC  1066
      || ||||||   ||||||||   |||||| |||||
seq2  TGCCTCTATTCTTTCCTTGAATGGATGGGCCTTAC  1083


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