BAC Information

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BAC

Clone NameB6Ng01-243K02
Chromosome1 (Build37)
Map Location 78,492,321 - 78,492,651
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha4, LOC100039330, Pax3, LOC100039210, Sgpp2, LOC100039382, Farsb
Downstream geneMogat1, Acsl3, Utp14b, LOC620521, Kcne4, LOC100039260, EG545332, Scg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243K02.bB6Ng01-243K02.g
ACCGA052960GA052961
length1,1361,154
definitionB6Ng01-243K02.b B6Ng01-243K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaagaaggttatctattcagtaacattcaaatgtacttctag
tagagatgatgaaactaattaggcattacaaagaacagagctagaatagt
tcagggctagtctgcagagtgattacttaggacagcagccagtctcaccc
aagcaaggggatagatacacaatggcctagctaataggtgggtttaccat
gaaagagttagggaatcccactgagacagggatcttctctacagccaggt
atagcaggctacattgcatattagaagcaagttagtgaatccttctgaca
aatggagattctccacagatacttaaaagaacagacaagttacattcata
caagagtttatcaaggcttaggaaatggggggttgtggtattgcattatt
catgagaaggtctgctagaccagaaccccctggtgctagctttcacaagg
ctcaaaggagtagcacaaattgtgactagggtgtgaaatccttacctgtc
attagctgaccctaggcagggctgttttatctttactgtaaatattacct
ggttcctgtaagcccttttgaagtcattcctttgttttgtgtcaggtaag
ttcaatgtactttgcctgctgtgactccctacccctttgttttctgtatt
atataagactggtgttcactttgtgacaatacaatcagattctacacaat
ctcttgtgtcacttctgtttgtcatttgccgactccttatccacctgcaa
ctagagacccgttctacacagagaggggaccaaaaagggtctgtggcact
tactgataaaataatttctctcctagaagcactgataatcttttttaagt
aaactgattgttagacagtatacacagatatataattgtgttttaaatac
tctccccattatgtcaggtggtaccatataagggctttttgaatatattt
ccttaatgacttattttttaatatttcatgctcttttactaatgctttaa
ttcccagaagaatattttgtatgatatgaaacaatttagtattcaacatt
agaatataggatcctcagttttaatagaggtattaaatatcatcatgata
atttttaagggcatggaaaagcatatgaatataaaa
gaattctttccaggtttctctctacttaattccctcagttagggtccaac
agtaggccatcacatagacaacaacagaatatgaagagtgcatttttctt
tctaagatggagttcagactcattattctgcctaacctgacaccaacacg
tagattaggaaataatagcttaactgtgttaaggtagaaaatttgatagt
ttctaatgacctgctttatggttcagagattattttggagtgttgaagat
gtagctctgtagcaaagtattcagtcctggcttgagcccagcaccactac
taagacataaaaagtaataactaaaaactccatcttatttttattaacat
gttttttagtgtataataagtatgcagtgccaaaggccagcttcaacacc
acagggtaaaggaaggcagagagtctggagtaggtgattgaggtcagtgc
tagtaagacagccaacaagggtcagcactagtaggactagtgggggtcaa
ttctgataacaactgacagggggctgctgccctatggcaacccactgaat
tagaagaaaaaagaaaagggggaaataatccctacccccccccctttttc
ccaaagggggggaaataaaaagcaaaaacaggggtcccaaccccaaaccc
aaaaaaaaaaacttttccccccggggcgccctcccccaaaaggttcaggg
ggcaaaaaaaaaaaaaaattttttttttttcttgtggaaaaaaaaatgtt
tttaacaacgccccacttctcccccggaacagaaaattttcccctttgtt
tttccccaaaaaaaaaattttttgttttttcccccgaaacacacacaacc
cccccccatttttaattttttttccctacacacaatatttatattttttt
tagactgtgcgagagcagaaaacgcgggaggataaacactctattttctc
gtcgcctctatagagagaagaagaatttctcatcctccttatatagagac
gatcctcttcttcggagggggcaacaaccaacagctagctcgcttacttc
tctttatacacatagatgaggagacgtagtctcacatcagagtatgagta
gtgtctgatgtgacgattacgtaatgcacgatcacgacatcattccgatg
ctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_78492321_78492651
seq2: B6Ng01-243K02.b_844_1182

seq1  ACTTACTGATAAAATAATTTCTCTCCTAGAAACACTGATAAACTTTTTTA  50
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  ACTTACTGATAAAATAATTTCTCTCCTAGAAGCACTGATAATCTTTTTTA  50

seq1  AGTAAACTGATTGTTAGACAATGTACACAGATATATACATAATGCGTTTT  100
      |||||||||||||||||||| | ||||||||||||||   | || |||||
seq2  AGTAAACTGATTGTTAGACAGTATACACAGATATATA---ATTGTGTTTT  97

seq1  AAATACTCT-TTCACTATGTCAGGTGGTATCATATAAGGGC-TTTTGAAT  148
      |||||||||   || |||||||||||||| ||||||||||| ||||||||
seq2  AAATACTCTCCCCATTATGTCAGGTGGTACCATATAAGGGCTTTTTGAAT  147

seq1  ATATTT-CTTAATG-CTTCATTTTTAGTATTTTATGCTCTTTTCCT-ATG  195
      |||||| ||||||| |||  |||||| ||||| |||||||||| || |||
seq2  ATATTTCCTTAATGACTTATTTTTTAATATTTCATGCTCTTTTACTAATG  197

seq1  C-TTAACTCCCA-AGGAATATTTTTTTATGTTTTGAAACAATTTAGTATT  243
      | |||| ||||| | ||||| |||| |||| | |||||||||||||||||
seq2  CTTTAATTCCCAGAAGAATA-TTTTGTATGATATGAAACAATTTAGTATT  246

seq1  CAACATTAG-ATATAGGATCCTCAGTT---ATGGATAGTACTAAATATTC  289
      ||||||||| |||||||||||||||||   || ||  ||| |||||| ||
seq2  CAACATTAGAATATAGGATCCTCAGTTTTAATAGA-GGTATTAAATA-TC  294

seq1  ATTAATGAT-ATTTTTA---GTATATGAAAGGATATGAATATAAAA  331
      | | ||||| |||||||   | ||   |||| ||||||||||||||
seq2  A-TCATGATAATTTTTAAGGGCATGGAAAAGCATATGAATATAAAA  339