BAC Information

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BAC

Clone NameB6Ng01-243N14
Chromosome1 (Build37)
Map Location 185,862,095 - 185,997,918
singlet/doubletdoublet
Overlap geneDusp10
Upstream geneTlr5, EG666649, 1700056E22Rik
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243N14.bB6Ng01-243N14.g
ACCGA053127GA053128
length3831,187
definitionB6Ng01-243N14.b B6Ng01-243N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(185,862,095 - 185,862,483)(185,996,733 - 185,997,918)
sequence
tccaaatgcatccattcctctgaggaagctgcaggggatagagatgtgaa
ccgcctacaaccatccttcctggtatcacctgacaagagttagcttctgt
ctcttccctagaaggagtcatacatcattttcccctagtgtagaataact
gatgactggacacccccccccccccaaaaaaaggaatagatgacccagtc
ttctctgagcttctaacatacagtgttgtcctgaccatgggcacagtcca
cttgctcatctttgtccttttgggctttgagcattactcttctgataata
tctacctagtcatgatggagagtgataactatcttcgtttcgaattttga
gccattgtgtgcatggtgggtggggtggggtgg

gaattctgattcaattaaaaatacattcaaactttcacagaacaaaacat
ctcaggaaaagcggcaccacttcctctgctggggctgactgtccctgctg
tgagcgttctctgtagccccaagcggcaacttctcctttctatgcttcag
tttatataaaacaagagcaatctttctgtagttcaagcttattttgattc
aatgccatgatacaaatgcaatttcctataacattccaaaaatcacaaaa
atgcaatggataaccaatgttctcatcctcaaaccagttcccctgcgtgt
tagatacatgtttttctgtaattgttttaacgtctttttgtacagttgag
tatcctttgagctatctcccgtgttttctaaagaagttattaaaagtagc
tgtcctcttccgtgccacagaggcagacagaggcatgagacccacagaga
gtattctgaggacgcccagagctgttacttgtttcagaaatagtcccagc
tcctgacctacaccatggcatttgtctcttcccctcccccaacctttatt
tggctcttgcttccattccaatcactctacaaatgtattggcaagaacag
agagcagggtacttgtgatctatatgcgtagacctcttgacagtctatta
gtaaaaaatagctctagttcactgttgtgtccccatgaggggggcacatg
agcgagattgggcacacgatccagcaggtttgatccacaggcatcccaga
tgttcccagcacctgtgtgctgtgtgcagatggttgtgtagtgaatgtgg
cacccagaaatgtgcacccaggtccactggcattcagcaagggggattcc
cctctgcaggaactgactgtgacttggaaggtagagtggaaagtctggga
ggcacaggtcagagacagtatgaagtagagatagctcccaagggctctgc
ctgccagctctgcctccctgtgggaaagggcatgtgtgacacagaggcca
tcagagtgtgagaaggtcctgctgaggtgagaaagagaagtgcattgttg
cctacattcaacatatgagttcaacatgtcacatatcaggaaaatcttac
taagactccacagaggtatccaaggcagatgtataccttctggtaagaga
actatacacttccaatttgtggaggggagggtgtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_185862095_185862483
seq2: B6Ng01-243N14.b_47_435

seq1  GAATTCTCCAAATGCATCCATTCCTCTGAGGAAGCTGCAGGGGATAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAATGCATCCATTCCTCTGAGGAAGCTGCAGGGGATAGAGA  50

seq1  TGTGAACCGCCTACAACCATCCTTCCTGGTATCACCTGACAAGAGTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCGCCTACAACCATCCTTCCTGGTATCACCTGACAAGAGTTAGC  100

seq1  TTCTGTCTCTTCCCTAGAAGGAGTCATACATCATTTTCCCCTAGTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTCTTCCCTAGAAGGAGTCATACATCATTTTCCCCTAGTGTAGA  150

seq1  ATAACTGATGACTGGACACCCCCCCCCCCCCAAAAAAAGGAATAGATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGATGACTGGACACCCCCCCCCCCCCAAAAAAAGGAATAGATGAC  200

seq1  CCAGTCTTCTCTGAGCTTCTAACATACAGTGTTGTCCTGACCATGGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTCTCTGAGCTTCTAACATACAGTGTTGTCCTGACCATGGGCAC  250

seq1  AGTCCACTTGCTCATCTTTGTCCTTTTGGGCTTTGAGCATTACTCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACTTGCTCATCTTTGTCCTTTTGGGCTTTGAGCATTACTCTTCTG  300

seq1  ATAATATCTACCTAGTCATGATGGAGAGTGATAACTATCTTCGTTTCGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCTACCTAGTCATGATGGAGAGTGATAACTATCTTCGTTTCGAA  350

seq1  TTTTGAGCCATTGTGTGCATGGTGGGTGGGGTGGGGTGG  389
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGCCATTGTGTGCATGGTGGGTGGGGTGGGGTGG  389


seq1: chr1_185996733_185997918
seq2: B6Ng01-243N14.g_65_1251 (reverse)

seq1  GCTTCACCCT-CCCTCCACAAATTGGA--TGTATAAGTCTCTTAACAGAA  47
      ||| |||||| ||||||||||||||||  ||||||  ||||||| |||||
seq2  GCTACACCCTCCCCTCCACAAATTGGAAGTGTATAGTTCTCTTACCAGAA  50

seq1  GTCACTACAAATTCTGCCTTGGATACTTCTGTGGGGTCTTTAGT-AGATT  96
      |  | ||||   |||||||||||||| ||||||| ||| ||||| |||||
seq2  GGTA-TACA---TCTGCCTTGGATACCTCTGTGGAGTC-TTAGTAAGATT  95

seq1  TTTCTGGTTATGTTGGCCAATGTTGACTTCATATGTTGAATGTAGGCA--  144
      || || | |||||  | | |||||||  ||||||||||||||||||||  
seq2  TTCCT-GATATGT--GAC-ATGTTGAACTCATATGTTGAATGTAGGCAAC  141

seq1  CATGCAC-TCTC-TTCTCACCTCAGCAGGACCCTTCTCACACTCTGGTGG  192
       |||||| |||| ||||||||||||||||| ||||||||||||||| |||
seq2  AATGCACTTCTCTTTCTCACCTCAGCAGGA-CCTTCTCACACTCTGATGG  190

seq1  CCTCTGTGTCACACATGCCC-TTCCCACAGGGAGGCAGAGCTGGCAGGCA  241
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCTCTGTGTCACACATGCCCTTTCCCACAGGGAGGCAGAGCTGGCAGGCA  240

seq1  GAGCCC-TGGGAGCTATCTCTACTTCATACTGTCTCTGACCTGTGCCT-C  289
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGCCCTTGGGAGCTATCTCTACTTCATACTGTCTCTGACCTGTGCCTCC  290

seq1  CAGACTTTCCACTCTACCTTCCAAGTCACAGTCAGTTCCTGCAGAGGGGA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTTCCACTCTACCTTCCAAGTCACAGTCAGTTCCTGCAGAGGGGA  340

seq1  ATCCCCCTTGCTGAATGCCAGTGGACCTGGGTGCACATTTCTGGGTGCCA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTTGCTGAATGCCAGTGGACCTGGGTGCACATTTCTGGGTGCCA  390

seq1  CATTCACTACACAACCATCTGCACACAGCACACAGGTGCTGGGAACATCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTACACAACCATCTGCACACAGCACACAGGTGCTGGGAACATCT  440

seq1  GGGATGCCTGTGGATCAAACCTGCTGGATCGTGTGCCCAATCTCGCTCAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCCTGTGGATCAAACCTGCTGGATCGTGTGCCCAATCTCGCTCAT  490

seq1  GTGCCCCCCTCATGGGGACACAACAGTGAACTAGAGCTATTTTTTACTAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCCCTCATGGGGACACAACAGTGAACTAGAGCTATTTTTTACTAA  540

seq1  TAGACTGTCAAGAGGTCTACGCATATAGATCACAAGTACCCTGCTCTCTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTCAAGAGGTCTACGCATATAGATCACAAGTACCCTGCTCTCTG  590

seq1  TTCTTGCCAATACATTTGTAGAGTGATTGGAATGGAAGCAAGAGCCAAAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCAATACATTTGTAGAGTGATTGGAATGGAAGCAAGAGCCAAAT  640

seq1  AAAGGTTGGGGGAGGGGAAGAGACAAATGCCATGGTGTAGGTCAGGAGCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGGGGGAGGGGAAGAGACAAATGCCATGGTGTAGGTCAGGAGCT  690

seq1  GGGACTATTTCTGAAACAAGTAACAGCTCTGGGCGTCCTCAGAATACTCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTATTTCTGAAACAAGTAACAGCTCTGGGCGTCCTCAGAATACTCT  740

seq1  CTGTGGGTCTCATGCCTCTGTCTGCCTCTGTGGCACGGAAGAGGACAGCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTCTCATGCCTCTGTCTGCCTCTGTGGCACGGAAGAGGACAGCT  790

seq1  ACTTTTAATAACTTCTTTAGAAAACACGGGAGATAGCTCAAAGGATACTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAATAACTTCTTTAGAAAACACGGGAGATAGCTCAAAGGATACTC  840

seq1  AACTGTACAAAAAGACGTTAAAACAATTACAGAAAAACATGTATCTAACA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTACAAAAAGACGTTAAAACAATTACAGAAAAACATGTATCTAACA  890

seq1  CGCAGGGGAACTGGTTTGAGGATGAGAACATTGGTTATCCATTGCATTTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGGGAACTGGTTTGAGGATGAGAACATTGGTTATCCATTGCATTTT  940

seq1  TGTGATTTTTGGAATGTTATAGGAAATTGCATTTGTATCATGGCATTGAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTTTGGAATGTTATAGGAAATTGCATTTGTATCATGGCATTGAA  990

seq1  TCAAAATAAGCTTGAACTACAGAAAGATTGCTCTTGTTTTATATAAACTG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAGCTTGAACTACAGAAAGATTGCTCTTGTTTTATATAAACTG  1040

seq1  AAGCATAGAAAGGAGAAGTTGCCGCTTGGGGCTACAGAGAACGCTCACAG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAGAAAGGAGAAGTTGCCGCTTGGGGCTACAGAGAACGCTCACAG  1090

seq1  CAGGGACAGTCAGCCCCAGCAGAGGAAGTGGTGCCGCTTTTCCTGAGATG  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAGTCAGCCCCAGCAGAGGAAGTGGTGCCGCTTTTCCTGAGATG  1140

seq1  TTTTGTTCTGTGAAAGTTTGAATGTATTTTTAATTGAATCAGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCTGTGAAAGTTTGAATGTATTTTTAATTGAATCAGAATTC  1187


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