BAC Information

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BAC

Clone NameB6Ng01-245I03
Chromosome1 (Build37)
Map Location 72,537,306 - 72,720,881
singlet/doubletdoublet
Overlap geneMarch4, Smarcal1, Ankar
Upstream geneLOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5
Downstream geneRpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208, LOC100043291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245I03.bB6Ng01-245I03.g
ACCGA054371GA054372
length1,1151,020
definitionB6Ng01-245I03.b B6Ng01-245I03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,719,773 - 72,720,881)(72,537,306 - 72,538,326)
sequence
gaattcagagaataagaatctaaaggaagacaaaggggtagtgtaaatta
gagttctttcagcaatacaacaaaaagaaatgtaatgctataccagtgtt
gactggtacaatgtgtccttgatttcaggaatcagtgcactccgctgttg
ctggctgccacttcgggagccctagacactattcagtacctgttttctct
tggtgcgaactggagaaaaacagacacaaagggaaacaacattatccacc
tgtcggtgctggcttttcacacagaggtgctcaagtacataatagagctg
aatatccctgagcttccagtttgggaaactctggtgggtaagtatagaac
atgagatttcactgtaaggaaatattctgattagtctataacatgatttt
ccatgtgcaaaggtgggataaataaaatagaatatttatatttttaaaat
taaagatcatgaaataaatttatgcattgaaaccagcaatagtacagtac
tatatttttgtgtgcaaaagtagtttgatttctaacttaaagatctgtgg
ccaaaatgaactatatcttacacaatgatatttactcttgtttcccaaca
ttcttagaaggcagaacataattttctccattaataaactgaattccaaa
agaaaaagaaaggaagaaggaaagagaggaaattcaagcctaagtagcaa
acgttcttttctgcttattccttactcctcattttagaggcaattttaga
aaagttttccttcacattttgatggatgttctatacaaaattttgtgttc
aatttagccagaaaaataagggttgtacagtcaattgaatgtacatgtca
aaatgtgctcctcccccaagccacattataattacataaagatcaacaat
gaatcagcagcagcagtcaagattcaggagaacaggagtgacgggaacca
ggcagccacctcttagacttagcatttccagagaataccaaagccatcat
taggaaagctgagaacttctcaaacacaatacgtcacagtcctccaaggc
cggaagaacaggcagtgccaggggcctctcccacaagagcccagcagaaa
gcctagcagctgctg
gaattctcagccgagagtgccagctggctttctaggaacagtgtttgtgg
ttataaaaggaaacatctttgaagggaaggtggccactctcctgggccaa
gagtcttagttggggaggaaaagagaataagggaggagacatgcctccaa
atcaatacacaaagctaaggatggtgcttgaggcagaaattctccaaggc
tcagcatgccttgccccaccccaggaactcccatgctgcagatctgggac
attgcacaaaaagtgcatttacatgaaaagcgcagtgtggcctgaaggca
agtggtctgggtgccctgctctcagaaacccaccctaaaggctgagaatg
ggcgtgtttaagaacccaattcctggacatatcagaggaacctaagtaga
gggtcagagatgggttgcctggagggacagagaagggacagagaacttct
gaagcacggggcagctaggaagggcttccgggtccaagcagtacaagcct
gctgtgggtgtctccctgtagccctcagctttctcattgctgtgctgaaa
tatctgaggagcaggtcgtttgtaaagaagagagattcgtttgggttcag
aattctggaggcgaaagttggaggagccatatttgctgatggcctccttt
ctggcagagtcccaaggtgacacagggaatcttgaagtgacaggaagccc
cccttacccctgatttaaagtcactaggattcaatctcaggcgttctgtc
caatttgcctaatccaaactgaatgcatttcccaaggctcccgtctctac
acatcagattaagcctcacaacaaagatcaaactccagcatgagtaggat
aaaccgcacttaagatgaatcacattctccattctttaagccacagtctc
caatttgtattcttttagaagatgtgccctctgatgatattgatatttta
gctggccaactacctttacagaagattaaatgttaacagtgatattttct
ctctctctcctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72719773_72720881
seq2: B6Ng01-245I03.b_47_1161 (reverse)

seq1  CAGCAGCTGCTAGCCTTTCTGGCTGGGCTC-TGT-GGAGAG--CCCTGGC  46
      ||||||||||||| |||||| ||||||||| ||| ||||||  |||||||
seq2  CAGCAGCTGCTAGGCTTTCT-GCTGGGCTCTTGTGGGAGAGGCCCCTGGC  49

seq1  ACTGCCTGTTC-TCCGGCCTTTGGAGGACTGTGACGTA-TGTGTTTGAGA  94
      ||||||||||| ||||||| |||||||||||||||||| |||||||||||
seq2  ACTGCCTGTTCTTCCGGCC-TTGGAGGACTGTGACGTATTGTGTTTGAGA  98

seq1  AGTTCTCAGCTTTCCTAATGATGGC-TTGGTATTCTCTGG-AATGCTAAG  142
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  AGTTCTCAGCTTTCCTAATGATGGCTTTGGTATTCTCTGGAAATGCTAAG  148

seq1  TCTAAGAGGTGGCTGCCTGGTT-CCGTCACTCCTGTTCTCTTGAATCTTG  191
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  TCTAAGAGGTGGCTGCCTGGTTCCCGTCACTCCTGTTCTCCTGAATCTTG  198

seq1  ACTGCTGCTGCTGATTCATTGTTTGATCTTTATGTAATTATAATGTGGCT  241
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGCTGCTGCTGATTCATTG-TTGATCTTTATGTAATTATAATGTGGCT  247

seq1  TGGGGGAGGAGCACATTTTGACATGTACATTCAATTGACTGTACAACCCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGAGCACATTTTGACATGTACATTCAATTGACTGTACAACCCT  297

seq1  TATTTTTCTGGCTAAATTGAACACAAAATTTTGTATAGAACATCCATCAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTGGCTAAATTGAACACAAAATTTTGTATAGAACATCCATCAA  347

seq1  AATGTGAAGGAAAACTTTTCTAAAATTGCCTCTAAAATGAGGAGTAAGGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAGGAAAACTTTTCTAAAATTGCCTCTAAAATGAGGAGTAAGGA  397

seq1  ATAAGCAGAAAAGAACGTTTGCTACTTAGGCTTGAATTTCCTCTCTTTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGAAAAGAACGTTTGCTACTTAGGCTTGAATTTCCTCTCTTTCC  447

seq1  TTCTTCCTTTCTTTTTCTTTTGGAATTCAGTTTATTAATGGAGAAAATTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTTCTTTTTCTTTTGGAATTCAGTTTATTAATGGAGAAAATTA  497

seq1  TGTTCTGCCTTCTAAGAATGTTGGGAAACAAGAGTAAATATCATTGTGTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCCTTCTAAGAATGTTGGGAAACAAGAGTAAATATCATTGTGTA  547

seq1  AGATATAGTTCATTTTGGCCACAGATCTTTAAGTTAGAAATCAAACTACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGTTCATTTTGGCCACAGATCTTTAAGTTAGAAATCAAACTACT  597

seq1  TTTGCACACAAAAATATAGTACTGTACTATTGCTGGTTTCAATGCATAAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACACAAAAATATAGTACTGTACTATTGCTGGTTTCAATGCATAAA  647

seq1  TTTATTTCATGATCTTTAATTTTAAAAATATAAATATTCTATTTTATTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATGATCTTTAATTTTAAAAATATAAATATTCTATTTTATTTA  697

seq1  TCCCACCTTTGCACATGGAAAATCATGTTATAGACTAATCAGAATATTTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTTTGCACATGGAAAATCATGTTATAGACTAATCAGAATATTTC  747

seq1  CTTACAGTGAAATCTCATGTTCTATACTTACCCACCAGAGTTTCCCAAAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTGAAATCTCATGTTCTATACTTACCCACCAGAGTTTCCCAAAC  797

seq1  TGGAAGCTCAGGGATATTCAGCTCTATTATGTACTTGAGCACCTCTGTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTCAGGGATATTCAGCTCTATTATGTACTTGAGCACCTCTGTGT  847

seq1  GAAAAGCCAGCACCGACAGGTGGATAATGTTGTTTCCCTTTGTGTCTGTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCCAGCACCGACAGGTGGATAATGTTGTTTCCCTTTGTGTCTGTT  897

seq1  TTTCTCCAGTTCGCACCAAGAGAAAACAGGTACTGAATAGTGTCTAGGGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAGTTCGCACCAAGAGAAAACAGGTACTGAATAGTGTCTAGGGC  947

seq1  TCCCGAAGTGGCAGCCAGCAACAGCGGAGTGCACTGATTCCTGAAATCAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAGTGGCAGCCAGCAACAGCGGAGTGCACTGATTCCTGAAATCAA  997

seq1  GGACACATTGTACCAGTCAACACTGGTATAGCATTACATTTCTTTTTGTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATTGTACCAGTCAACACTGGTATAGCATTACATTTCTTTTTGTT  1047

seq1  GTATTGCTGAAAGAACTCTAATTTACACTACCCCTTTGTCTTCCTTTAGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTGAAAGAACTCTAATTTACACTACCCCTTTGTCTTCCTTTAGA  1097

seq1  TTCTTATTCTCTGAATTC  1109
      ||||||||||||||||||
seq2  TTCTTATTCTCTGAATTC  1115

seq1: chr1_72537306_72538326
seq2: B6Ng01-245I03.g_68_1087

seq1  GAATTCTCAGCCGAGAGTGCCAGCTGGCTTTCTAGGAACAGTGTTTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCGAGAGTGCCAGCTGGCTTTCTAGGAACAGTGTTTGTGG  50

seq1  TTATAAAAGGAAACATCTTTGAAGGGAAGGTGGCCACTCTCCTGGGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGGAAACATCTTTGAAGGGAAGGTGGCCACTCTCCTGGGCCAA  100

seq1  GAGTCTTAGTTGGGGAGGAAAAGAGAATAAGGGAGGAGACATGCCTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTAGTTGGGGAGGAAAAGAGAATAAGGGAGGAGACATGCCTCCAA  150

seq1  ATCAATACACAAAGCTAAGGATGGTGCTTGAGGCAGAAATTCTCCAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATACACAAAGCTAAGGATGGTGCTTGAGGCAGAAATTCTCCAAGGC  200

seq1  TCAGCATGCCTTGCCCCACCCCAGGAACTCCCATGCTGCAGATCTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGCCTTGCCCCACCCCAGGAACTCCCATGCTGCAGATCTGGGAC  250

seq1  ATTGCACAAAAAGTGCATTTACATGAAAAGCGCAGTGTGGCCTGAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACAAAAAGTGCATTTACATGAAAAGCGCAGTGTGGCCTGAAGGCA  300

seq1  AGTGGTCTGGGTGCCCTGCTCTCAGAAACCCACCCTAAAGGCTGAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTGGGTGCCCTGCTCTCAGAAACCCACCCTAAAGGCTGAGAATG  350

seq1  GGCGTGTTTAAGAACCCAATTCCTGGACATATCAGAGGAACCTAAGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTTTAAGAACCCAATTCCTGGACATATCAGAGGAACCTAAGTAGA  400

seq1  GGGTCAGAGATGGGTTGCCTGGAGGGACAGAGAAGGGACAGAGAACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGAGATGGGTTGCCTGGAGGGACAGAGAAGGGACAGAGAACTTCT  450

seq1  GAAGCACGGGGCAGCTAGGAAGGGCTTCCGGGTCCAAGCAGTACAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACGGGGCAGCTAGGAAGGGCTTCCGGGTCCAAGCAGTACAAGCCT  500

seq1  GCTGTGGGTGTCTCCCTGTAGCCCTCAGCTTTCTCATTGCTGTGCTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGGTGTCTCCCTGTAGCCCTCAGCTTTCTCATTGCTGTGCTGAAA  550

seq1  TATCTGAGGAGCAGGTCGTTTGTAAAGAAGAGAGATTCGTTTGGGTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAGGAGCAGGTCGTTTGTAAAGAAGAGAGATTCGTTTGGGTTCAG  600

seq1  AATTCTGGAGGCGAAAGTTGGAGGAGCCATATTTGCTGATGGCCTCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGAGGCGAAAGTTGGAGGAGCCATATTTGCTGATGGCCTCCTTT  650

seq1  CTGGCAGAGTCCCAAGGTGACACAGGGAATCTTGAAGTGACAGGAAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGTCCCAAGGTGACACAGGGAATCTTGAAGTGACAGGAAGCCC  700

seq1  CCCTTACCCCTGATTTAAAGTCACTAGGATTCAATCTCAGGCGTTCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCCCTGATTTAAAGTCACTAGGATTCAATCTCAGGCGTTCTGTC  750

seq1  CAATTTGCCTAATCCAAACTGAATGCATTTCCCAAGGCTCCCGTCTCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGCCTAATCCAAACTGAATGCATTTCCCAAGGCTCCCGTCTCTAC  800

seq1  ACATCAGATTAAGCCTCACAACAAAGATCAAACTCCAGCATGAGTAGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGATTAAGCCTCACAACAAAGATCAAACTCCAGCATGAGTAGGAT  850

seq1  AAACCGCACTTAAGATGAATCACATTCTCCATTCTTTAAGCCACAGTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGCACTTAAGATGAATCACATTCTCCATTCTTTAAGCCACAGTCTC  900

seq1  CAATTTGTATTCTTTTAGAAGATGTGCCCTCTGATGATATTGATATTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTATTCTTTTAGAAGATGTGCCCTCTGATGATATTGATATTTTA  950

seq1  GCTGGCCAACTACC-TTACAGAAGATTAAATGTTTAACAGTGTTATTTTC  999
      |||||||||||||| ||||||||||||||||| ||||||||| |||||||
seq2  GCTGGCCAACTACCTTTACAGAAGATTAAATG-TTAACAGTGATATTTTC  999

seq1  TCTCTCTCTCTCTCTCTCTCTC  1021
      |||||||||| |||||||||||
seq2  TCTCTCTCTC-CTCTCTCTCTC  1020