BAC Information

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BAC

Clone NameB6Ng01-245K19
Chromosome1 (Build37)
Map Location 176,760,448 - 176,761,250
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
Downstream geneGrem2, Rgs7, Fh1, Kmo, Opn3, Chml, Wdr64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245K19.bB6Ng01-245K19.g
ACCGA054499GA054500
length1,216801
definitionB6Ng01-245K19.b B6Ng01-245K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccacttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttgagatttgaagtttttatcatac
agatctttcacttccttagttagagtcacgcccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctaattctttctcagctgttta
tttctttgtgtagagaaaggccattgacttgtttggagtttaatttttat
attccagctactttcacggaagctgtttattcatgttagggagtttctct
tggttgaatttttaaggtcacttaaatatatacctatcatattcactctg
gcaaaaggggaattttgggacctcctccgtttccaaatatgtgaatccac
caccgtcgtgatattc
gaattcactgatgaagaatatctggaggtaacatttactggtcctgcaag
aacatagctgatacttaaaaaaaaaaaaaggaacacaggtgttgacaggt
tgttgctgttgttgttgttgttttctgttattcctttgattctttggatt
tggtccagtgtgaagaataaatcagtattgaaggactttataattaatat
tggtaaaattgcatttccaatattaagcacattcatctggtccattatgt
ttaaccaggagaaaatacactgaaggtcatttaccttggtccatatcagt
agagcaaccctgtcagatctcctgcccatggaagattaagaatatccttt
taaacttgtgaaatgatgaagtagataaggctttgctaccaagcctgatg
atgtaagtcatctccagagccccaggggtgaaaggagagaaccaactccc
acaagttttcttctgacctacacttttgagccagggtagacacatcccca
tgccctcacacacacagaaagttgacttaagaagaagaaaagacagcagg
gcccccagtggaggagctagggaaagtacccaaggagctgaaagggtctg
caactctataggtggaacaacaatatgaactaaccagtaccccccagagc
tcgtgtctctagctgcacatgtagcagaagatggccttgtcggccatcat
tgggaagacaggcctcttggatcttgccagtctatattccttcattatca
ggggaacgccccccagacgtgggagtgggtgggtagaggagcaaggtggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176760448_176761250
seq2: B6Ng01-245K19.g_69_869

seq1  GAATTCACTGATGAAGAATATCTGGAGGTAACATTTACTGGTCCTGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGATGAAGAATATCTGGAGGTAACATTTACTGGTCCTGCAAG  50

seq1  AACATAGCTGATACTTAAAAAAAAAAAAAGGAACACAGGTGTTGACAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCTGATACTTAAAAAAAAAAAAAGGAACACAGGTGTTGACAGGT  100

seq1  TGTTGCTGTTGTTGTTGTTGTTTTCTGTTATTCCTTTGATTCTTTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGTTGTTGTTGTTGTTTTCTGTTATTCCTTTGATTCTTTGGATT  150

seq1  TGGTCCAGTGTGAAGAATAAATCAGTATTGAAGGACTTTATAATTAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCAGTGTGAAGAATAAATCAGTATTGAAGGACTTTATAATTAATAT  200

seq1  TGGTAAAATTGCATTTCCAATATTAAGCACATTCATCTGGTCCATTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAATTGCATTTCCAATATTAAGCACATTCATCTGGTCCATTATGT  250

seq1  TTAACCAGGAGAAAATACACTGAAGGTCATTTACCTTGGTCCATATCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGGAGAAAATACACTGAAGGTCATTTACCTTGGTCCATATCAGT  300

seq1  AGAGCAACCCTGTCAGATCTCCTGCCCATGGAAGATTAAGAATATCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACCCTGTCAGATCTCCTGCCCATGGAAGATTAAGAATATCCTTT  350

seq1  TAAACTTGTGAAATGATGAAGTAGATAAGGCTTTGCTACCAAGCCTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGTGAAATGATGAAGTAGATAAGGCTTTGCTACCAAGCCTGATG  400

seq1  ATGTAAGTCATCTCCAGAGCCCCAGGGGTGAAAGGAGAGAACCAACTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTCATCTCCAGAGCCCCAGGGGTGAAAGGAGAGAACCAACTCCC  450

seq1  ACAAGTTTTCTTCTGACCTACACTTTTGAGCCAGGGTAGACACATCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTTCTTCTGACCTACACTTTTGAGCCAGGGTAGACACATCCCCA  500

seq1  TGCCCTCACACACACAGAAAGTTGACTTAAGAAGAAGAAAAGACAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCACACACACAGAAAGTTGACTTAAGAAGAAGAAAAGACAGCAGG  550

seq1  GCCCCCAGTGGAGGAGCTAGGGAAAGTACCCAAGGAGCTGAAAGGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAGTGGAGGAGCTAGGGAAAGTACCCAAGGAGCTGAAAGGGTCTG  600

seq1  CAACTCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCCAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCCAGAGC  650

seq1  TCGTGTCTCTAGCTGCACATGTAGCAGAAGATGGCCTTGTCGGCCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTCTCTAGCTGCACATGTAGCAGAAGATGGCCTTGTCGGCCATCAT  700

seq1  TGGGAAGACAGGCCCCTTGG-TCTTGCAAACTTTATATGCC-TCAGTA-C  747
      |||||||||||||| ||||| ||||||  | | ||||| || ||| || |
seq2  TGGGAAGACAGGCCTCTTGGATCTTGC-CAGTCTATATTCCTTCATTATC  749

seq1  AGGGGAACGCCAGGGGCCAAGAAGTGGGAGTGGGTGGGTAGAGGAGCAGG  797
      |||||||||||     || ||| ||||||||||||||||||||||||| |
seq2  AGGGGAACGCC----CCCCAGACGTGGGAGTGGGTGGGTAGAGGAGCAAG  795

seq1  GTGGGG  803
      ||||||
seq2  GTGGGG  801