BAC Information

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BAC

Clone NameB6Ng01-247F13
Chromosome1 (Build37)
Map Location 64,624,312 - 64,625,430
singlet/doubletsinglet
Overlap geneCreb1
Upstream geneAdam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124
Downstream gene2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247F13.bB6Ng01-247F13.g
ACCGA055705GA055706
length1,113990
definitionB6Ng01-247F13.b B6Ng01-247F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatcaacctgggtaacagcaacaccctgtctggaagttttaaa
aattgtaaaaaggctgggttgagtctaaatcagtggtagggcgcctgtct
actatgaacaggccctcaggacaatccccagtactgcaaggaagggagga
agaaaggagctggtgctgcccctgcacatggtcccacacctctctgaggt
tctctgtaagagatgagccttcactctacagagccaaagtatgcagccat
gatttcaagtccttaaaaaacattctgattactctgtccccttagaattg
tttctttagtaagtgctgctgtctgaaattttacaattagatctttactt
gagacatcttaaacaccattctttcttattttagaaaaggtcaactattt
cttaacaaatactttaaaactgaacagattaatgtgtaacttaattcgta
tttccaaataacatttaaataagagttaggcagtacatttctattatatc
ttaactacttatagttgtttggtgttgtgtccggccagcagatcacaaca
tgggttctagcctggaaaggcattttggaaacctggaagagaagaggact
aggtggcgagataaagaaatgcagctaagacaggcattctgatcaaagtt
ctattttactgttctacacgcagttatgaagcaggggaagggggcccgat
tcccgccaattagtcttggggtcaaatagcagggtgaccacgtgcacggc
tccaaacagcaaagccgcaggtccagcagtgggcgtggcagaacgattga
gtgggaagctccacccctgagcaagcaggtttcagctgggggaggggaga
ctacagtttggtgcacaataaaggtcacagggcttctttcaagattccct
tactatctcagaatgggtttctcctttttcatagctagatataatttact
aagactgtgacagtttaagactattttcaggaacaatgatgctgacctac
caaaaaataaaattgttgggagagaagagcagtagagatgccatgtgctg
tcttacctgacctgagagccagcttgggtgcaagagagatcttatttacc
tcaagtagaaacc
gaattctaatctcctcctgactgctcaagatcaagacgtagaactctcag
ctcctccagcagcatgtctgcctgcatgctgccatgcttcccgtcatggc
gataatgacctaaacctctcaaactgttaagccagccccaactaaatgtt
tgtctttataagagttgccttgggggctggagagatggctcagaggttaa
aagcactggctactcttctagagatcctgagttcaattcctagcaaccac
atgacagctgataaccacctataatgaggtctagtgccctcttctggcca
gcacacatgtgtgcaggcagacggctatatacataataaataaatctttg
ttgggcagtggtggtgcatgcctttaatctcagcacttgggaggcagagg
caggcaaatttctgagtttgcggccagcctggtctacagagtgagttcca
ggacagccatggctatacagagaaaccctgtcgcgaaaataaataaataa
ataaataaataggagatgccttggtcatggtgtctcttcacagcaatgga
aacttttaactaagacaaacacaaatagcctcaagtcacccgagacgcta
actgcatttaaaaactatctctatctgttgtctctgagagtcacatttta
ttagtaaagacatacacagcttgagaatcaaaggatgaaaacaatccagc
aagtgaatggaagttaaaaagaacctggcataggtattttaacatctaat
aaagttgttctcaaaccaaaatcagtcaaaagatataatgaatgccactg
catactaataaagagatcaacccacctaaaagactaaacaactggatgtg
caccaaatgctggaacacccaatttaataaagcaaagaccaatagatata
aaaggtctgacaggtcatgctaaaataatagatgacttttatactccaaa
taaaagtcataaaaagaagcttcatagctatatactatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64624312_64625430
seq2: B6Ng01-247F13.b_44_1156 (reverse)

seq1  GGTTTCTACCTTTGAGTAAAATAAGATCTCTCCTTGCACCCAAAGCTTGG  50
      |||||||||  |||||  ||||||||||||| ||||||||| |||| |||
seq2  GGTTTCTAC--TTGAGGTAAATAAGATCTCT-CTTGCACCC-AAGC-TGG  45

seq1  CTCTCAGGGTCAGGTAAGACAGCACATGGCATCTCTACTGCTCCTTCTCT  100
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCTCA-GGTCAGGTAAGACAGCACATGGCATCTCTACTGCT-CTTCTCT  93

seq1  TCCAACAATTTTA-TTTTTGGTAGGTCAGCATCATTGTTCCTG-AAATAG  148
       |||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  CCCAACAATTTTATTTTTTGGTAGGTCAGCATCATTGTTCCTGAAAATAG  143

seq1  TCTT-AACTGTCACAGTCTTAGTAAATTATATCTAGCTATGAAAAAGGAG  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAACTGTCACAGTCTTAGTAAATTATATCTAGCTATGAAAAAGGAG  193

seq1  AAACCCATTCTGAGATAGTAAGGGAATCTTGAAAAGAAGCCCTGTGACCT  247
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAACCCATTCTGAGATAGTAAGGGAATCTTG-AAAGAAGCCCTGTGACCT  242

seq1  TTATTGTGCACCAAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTT  297
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATTGTGCACCAAACTGTAGTCTCCCCTCCCCCAG-CTGAAACCTGCTT  291

seq1  GCTCAGGGGTGGAGCTTCCCACTCAATCGTTCTGCCACGCCCACTGCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGGTGGAGCTTCCCACTCAATCGTTCTGCCACGCCCACTGCTGG  341

seq1  ACCTGCGGCTTTGCTGTTTGGAGCCGTGCACGTGGTCACCCTGCTATTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCGGCTTTGCTGTTTGGAGCCGTGCACGTGGTCACCCTGCTATTTG  391

seq1  ACCCCAAGACTAATTGGCGGGAATCGGGCCCCCTTCCCCTGCTTCATAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAGACTAATTGGCGGGAATCGGGCCCCCTTCCCCTGCTTCATAAC  441

seq1  TGCGTGTAGAACAGTAAAATAGAACTTTGATCAGAATGCCTGTCTTAGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTAGAACAGTAAAATAGAACTTTGATCAGAATGCCTGTCTTAGCT  491

seq1  GCATTTCTTTATCTCGCCACCTAGTCCTCTTCTCTTCCAGGTTTCCAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTTTATCTCGCCACCTAGTCCTCTTCTCTTCCAGGTTTCCAAAA  541

seq1  TGCCTTTCCAGGCTAGAACCCATGTTGTGATCTGCTGGCCGGACACAACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCCAGGCTAGAACCCATGTTGTGATCTGCTGGCCGGACACAACA  591

seq1  CCAAACAACTATAAGTAGTTAAGATATAATAGAAATGTACTGCCTAACTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAACTATAAGTAGTTAAGATATAATAGAAATGTACTGCCTAACTC  641

seq1  TTATTTAAATGTTATTTGGAAATACGAATTAAGTTACACATTAATCTGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAATGTTATTTGGAAATACGAATTAAGTTACACATTAATCTGTT  691

seq1  CAGTTTTAAAGTATTTGTTAAGAAATAGTTGACCTTTTCTAAAATAAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTAAAGTATTTGTTAAGAAATAGTTGACCTTTTCTAAAATAAGAA  741

seq1  AGAATGGTGTTTAAGATGTCTCAAGTAAAGATCTAATTGTAAAATTTCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTGTTTAAGATGTCTCAAGTAAAGATCTAATTGTAAAATTTCAG  791

seq1  ACAGCAGCACTTACTAAAGAAACAATTCTAAGGGGACAGAGTAATCAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCACTTACTAAAGAAACAATTCTAAGGGGACAGAGTAATCAGAA  841

seq1  TGTTTTTTAAGGACTTGAAATCATGGCTGCATACTTTGGCTCTGTAGAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTAAGGACTTGAAATCATGGCTGCATACTTTGGCTCTGTAGAGT  891

seq1  GAAGGCTCATCTCTTACAGAGAACCTCAGAGAGGTGTGGGACCATGTGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCATCTCTTACAGAGAACCTCAGAGAGGTGTGGGACCATGTGCA  941

seq1  GGGGCAGCACCAGCTCCTTTCTTCCTCCCTTCCTTGCAGTACTGGGGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGCACCAGCTCCTTTCTTCCTCCCTTCCTTGCAGTACTGGGGATT  991

seq1  GTCCTGAGGGCCTGTTCATAGTAGACAGGCGCCCTACCACTGATTTAGAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGGGCCTGTTCATAGTAGACAGGCGCCCTACCACTGATTTAGAC  1041

seq1  TCAACCCAGCCTTTTTACAATTTTTAAAACTTCCAGACAGGGTGTTGCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCAGCCTTTTTACAATTTTTAAAACTTCCAGACAGGGTGTTGCTG  1091

seq1  TTACCCAGGTTGATCTGAATTC  1119
      ||||||||||||||||||||||
seq2  TTACCCAGGTTGATCTGAATTC  1113