BAC Information

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BAC

Clone NameB6Ng01-248B01
Chromosome1 (Build37)
Map Location 126,475,721 - 126,618,342
singlet/doubletdoublet
Overlap geneLOC666998
Upstream geneDpp10
Downstream geneActr3, Slc35f5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248B01.bB6Ng01-248B01.g
ACCGA056235GA056236
length1,0111,139
definitionB6Ng01-248B01.b B6Ng01-248B01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,617,751 - 126,618,342)(126,475,721 - 126,476,873)
sequence
gaattcattgaaaaacagtgtgcagttgctaatgcaactatctcatcgct
atagcaaaactatctggtaaaaatgacttaagaaggaaaggtcctgtctt
agtctgtgttctgttgttgtgaagagacaccgtgaccacagtaactcatt
taattggggcttgcttgcaattttagaggttcagtccattattttcatgg
caaggagcatggtggcacagatttcgacatggtgccagagacgatgacag
ttcttcatcctgatcctcaggcaacaggaaaagagaggaagatgcttggc
ctagtttgagatttgaaaccccaagacctcagtgacacagttcttccaat
atggttacacctcctaatccttcccaggtagcaccactctctaatggcca
aacattttaacatatgagcctagggggacaaccctattcaaaccatcaca
ggtccccagctatttacattagagtgggtcttttcacctcagttaatcca
atctggaaattatttcatagtcactggaccaagtttatctcattaatgat
tctagatcctgtggtgttgacaatcaatattaccatgatacccactaccc
cctttattgcttgcattcattcattcattacacatatgtatatgtatata
gtatatatacatatgtgggcaagtgtgccatgttatgtgtgctcagagga
cttgtacaagtgtgttctctttttccatcacgtgggccctggaaattatt
tgagttgtcaggcttacgtgcggttgcctgtattggctgtgctacctagt
cagtcccctcatggtcttcttaagaacagttgaggtaatctcatacagaa
aggtctagagaaccatttgtggatgttttattttctgtgtaatatctcag
caagcatgtgaaattcttgcatcttctcactcttcttcgaaaccgtggct
ccgattttgttcactccataaagcctgccattctcccctcgctccccctt
tgctgtgtgca

gaattctccctctctttctatggtggatacccagcttttcttggttatag
ttgttaaaactttggttcctgagaccttacaccctgcatctgtgattgtg
aagaaacaccatggctaagaaacttttggaatgaaaagtatatttgggtt
ccaaagtccaaagaaataaacgctcaaaatggcaaggtagtatggtagca
agcagcagacatgaggctgaagcaggaagctgagagcttacaacgtcagt
cacagaaaggctgggacatggctcagtctcttttcatgttctagtgacat
gtttcagtcaacatgacacacctcttcagcctccccaaacagcacctcta
tttgggaacaaagtattcaaacataggaacccaagaggggacattctcat
ttaaatgacttcataccagtcctcttatgtgtcttccatgatggttggca
ttaattggtatcctgatagaacatagtcacttggaacaggggctcctggg
catgcctgtgagagattacgttgacaatataaattggaatgagaagaccc
accttaattgaaagtgggaccacactcttggagttcctggactgttttaa
aatggaaaaatatcaagctgagaattcattaatcaatccctgctttctat
ttctaatagatatgggaccagctgctttaatcccttactgccttgacttc
ttcactgtgataaactataccattccctttttaagtttctttttgtaaga
gtagtttatcatagcaataggaaaaggcattaagaaaccctccaaacttc
attcttagcttttgacttcaccttgactcccctgttttcccatatattca
tagtagaccatttgacttctcaacatccattatcatgagattcagttctt
atacaactctccttttatattacatgtaaattactggttcctttttccta
agactcagcatatttttaggacccagactgctaatttctcatgctgtcat
atctcagcacacgcatgtctcatgagatactgactaaacacacggtacac
acacacacacacacacacctagtagtagggtcaaggaactgtagtcagtg
gtagagtgtgcctagccatgccataaagtcctggttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126617751_126618342
seq2: B6Ng01-248B01.b_45_636 (reverse)

seq1  GGTATCATGGTAATATTGATTGTCAACACCACAGGATCTAGAATCATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATGGTAATATTGATTGTCAACACCACAGGATCTAGAATCATTAA  50

seq1  TGAGATAAACTTGGTCCAGTGACTATGAAATAATTTCCAGATTGGATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAAACTTGGTCCAGTGACTATGAAATAATTTCCAGATTGGATTAA  100

seq1  CTGAGGTGAAAAGACCCACTCTAATGTAAATAGCTGGGGACCTGTGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTGAAAAGACCCACTCTAATGTAAATAGCTGGGGACCTGTGATGG  150

seq1  TTTGAATAGGGTTGTCCCCCTAGGCTCATATGTTAAAATGTTTGGCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAGGGTTGTCCCCCTAGGCTCATATGTTAAAATGTTTGGCCATT  200

seq1  AGAGAGTGGTGCTACCTGGGAAGGATTAGGAGGTGTAACCATATTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGGTGCTACCTGGGAAGGATTAGGAGGTGTAACCATATTGGAAG  250

seq1  AACTGTGTCACTGAGGTCTTGGGGTTTCAAATCTCAAACTAGGCCAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTCACTGAGGTCTTGGGGTTTCAAATCTCAAACTAGGCCAAGCA  300

seq1  TCTTCCTCTCTTTTCCTGTTGCCTGAGGATCAGGATGAAGAACTGTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTCTTTTCCTGTTGCCTGAGGATCAGGATGAAGAACTGTCATC  350

seq1  GTCTCTGGCACCATGTCGAAATCTGTGCCACCATGCTCCTTGCCATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGCACCATGTCGAAATCTGTGCCACCATGCTCCTTGCCATGAAA  400

seq1  ATAATGGACTGAACCTCTAAAATTGCAAGCAAGCCCCAATTAAATGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGACTGAACCTCTAAAATTGCAAGCAAGCCCCAATTAAATGAGTT  450

seq1  ACTGTGGTCACGGTGTCTCTTCACAACAACAGAACACAGACTAAGACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTCACGGTGTCTCTTCACAACAACAGAACACAGACTAAGACAGG  500

seq1  ACCTTTCCTTCTTAAGTCATTTTTACCAGATAGTTTTGCTATAGCGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCCTTCTTAAGTCATTTTTACCAGATAGTTTTGCTATAGCGATGA  550

seq1  GATAGTTGCATTAGCAACTGCACACTGTTTTTCAATGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTGCATTAGCAACTGCACACTGTTTTTCAATGAATTC  592


seq1: chr1_126475721_126476873
seq2: B6Ng01-248B01.g_63_1201

seq1  GAATTCTCCCTCTCTTTCTATGGTGGATACCCAGCTTTTCTTGGTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTCTCTTTCTATGGTGGATACCCAGCTTTTCTTGGTTATAG  50

seq1  TTGTTAAAACTTTGGTTCCTGAGACCTTACACCCTGCATCTGTGATTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAAACTTTGGTTCCTGAGACCTTACACCCTGCATCTGTGATTGTG  100

seq1  AAGAAACACCATGGCTAAGAAACTTTTGGAATGAAAAGTATATTTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACACCATGGCTAAGAAACTTTTGGAATGAAAAGTATATTTGGGTT  150

seq1  CCAAAGTCCAAAGAAATAAACGCTCAAAATGGCAAGGTAGTATGGTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCCAAAGAAATAAACGCTCAAAATGGCAAGGTAGTATGGTAGCA  200

seq1  AGCAGCAGACATGAGGCTGAAGCAGGAAGCTGAGAGCTTACAACGTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGACATGAGGCTGAAGCAGGAAGCTGAGAGCTTACAACGTCAGT  250

seq1  CACAGAAAGGCTGGGACATGGCTCAGTCTCTTTTCATGTTCTAGTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGGCTGGGACATGGCTCAGTCTCTTTTCATGTTCTAGTGACAT  300

seq1  GTTTCAGTCAACATGACACACCTCTTCAGCCTCCCCAAACAGCACCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTCAACATGACACACCTCTTCAGCCTCCCCAAACAGCACCTCTA  350

seq1  TTTGGGAACAAAGTATTCAAACATAGGAACCCAAGAGGGGACATTCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACAAAGTATTCAAACATAGGAACCCAAGAGGGGACATTCTCAT  400

seq1  TTAAATGACTTCATACCAGTCCTCTTATGTGTCTTCCATGATGGTTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGACTTCATACCAGTCCTCTTATGTGTCTTCCATGATGGTTGGCA  450

seq1  TTAATTGGTATCCTGATAGAACATAGTCACTTGGAACAGGGGCTCCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGTATCCTGATAGAACATAGTCACTTGGAACAGGGGCTCCTGGG  500

seq1  CATGCCTGTGAGAGATTACGTTGACAATATAAATTGGAATGAGAAGACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGTGAGAGATTACGTTGACAATATAAATTGGAATGAGAAGACCC  550

seq1  ACCTTAATTGAAAGTGGGACCACACTCTTGGAGTTCCTGGACTGTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATTGAAAGTGGGACCACACTCTTGGAGTTCCTGGACTGTTTTAA  600

seq1  AATGGAAAAATATCAAGCTGAGAATTCATTAATCAATCCCTGCTTTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAAATATCAAGCTGAGAATTCATTAATCAATCCCTGCTTTCTAT  650

seq1  TTCTAATAGATATGGGACCAGCTGCTTTAATCCCTTACTGCCTTGACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATAGATATGGGACCAGCTGCTTTAATCCCTTACTGCCTTGACTTC  700

seq1  TTCACTGTGATAAACTATACCATTCCCTTTTTAAGTTTCTTTTTGTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTGATAAACTATACCATTCCCTTTTTAAGTTTCTTTTTGTAAGA  750

seq1  GTAGTTTATCATAGCAATAGGAAAAGGCATTAAGAAACCCTCCAAACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTATCATAGCAATAGGAAAAGGCATTAAGAAACCCTCCAAACTTC  800

seq1  ATTCTTAGCTTTTGACTTCACCTTGACTCCCCTGTTTTCCCATATATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGCTTTTGACTTCACCTTGACTCCCCTGTTTTCCCATATATTCA  850

seq1  TAGTAGACCATTTGACTTCTCAACATCCATTATCATGAGATTCAGTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGACCATTTGACTTCTCAACATCCATTATCATGAGATTCAGTTCTT  900

seq1  ATAACAACTCTCCTTTTATATTTACATGTAAATTACTGGTTCCTTTTTCC  950
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AT-ACAACTCTCCTTTTATA-TTACATGTAAATTACTGGTTCCTTTTTCC  948

seq1  TAAAGAACTCAGGCAATATTTTAGGACCCAGACTGCTAATTTCTCATGCT  1000
      |||   ||||| |||   ||||||||||||||||||||||||||||||||
seq2  TAA--GACTCA-GCATATTTTTAGGACCCAGACTGCTAATTTCTCATGCT  995

seq1  GTCATAATCTCAAGCACAACGCATGTCTCATGAGAATACTGACTTAAACA  1050
      ||||| ||||| ||||| |||||||||||||||| |||||||| ||||||
seq2  GTCAT-ATCTC-AGCAC-ACGCATGTCTCATGAG-ATACTGAC-TAAACA  1040

seq1  CAC-GTACACACACACACACACACAAAAACATAAGTAGTAGGGGTCAGG-  1098
      ||| ||||||||||||||||||||  | || | ||||||||||   ||| 
seq2  CACGGTACACACACACACACACAC--ACACCT-AGTAGTAGGGTCAAGGA  1087

seq1  ACTGTAGTTCAGTTGGTAGAGTGTTTGCCTAG-CATG-CATAAAGCCCTT  1146
      ||||||| |||| ||||||||||  ||||||| |||| ||||||| || |
seq2  ACTGTAG-TCAG-TGGTAGAGTG--TGCCTAGCCATGCCATAAAGTCC-T  1132

seq1  GGTTCAA  1153
      |||||||
seq2  GGTTCAA  1139


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