BAC Information

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BAC

Clone NameB6Ng01-248I14
Chromosome1 (Build37)
Map Location 175,817,246 - 175,818,390
singlet/doubletsinglet
Overlap genenone
Upstream geneApcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462
Downstream geneMnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248I14.bB6Ng01-248I14.g
ACCGA056588GA056589
length9371,151
definitionB6Ng01-248I14.b B6Ng01-248I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagacttccatatccagggatccaccccataatc
agcatccaaacactgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggat
gaattcctgtcaggggtctgagttgacttacagatgctggagaggcctga
ggttgatcctccacaaggtcaaggttggacattgcctgggacagcatgtc
tgtttgtgtagacttattgtttgagttctcctatttaaaatgaaaaaaaa
aaaaaaggttgttctcctttataccttgatagttactttcaaagtcacag
acattattggcactttttcctttagttttgttcacagaatatctttgctc
tctaattttttccctggaatgacagcacatctttagataactttacattc
cagataccttaacaaagattacaaactacagtgtgcaaatatgttttaaa
tattagtttgctctcagtttttctgccctccactccatgacttcttcttt
gtgcctgcttgccggttcttgctgggttccccttttctatgcaagattgt
cccaacttctgctttctaattgcatctattcacccaccctttccatttct
accctctctgatgacttcttccttcctgctcatgatctcttttctacctt
tgtggcttactcacaacttcacatccgtgtcccccaccccacacacataa
tgtgtaagtacaatatttcacattacaagtgctcttctgtgatggaatgt
gtggcataattgtattggacactgaccacagatagattggtcaattacaa
cttttacttgtgtttttctttgcattccacattctctctaattaagatat
taatttttctacttgtcttcaagatctgaaatcctctcgtctataatctg
ttggaggagcctatatctgagatgtttgacttcctaagttttttttttca
tttccagttatatttaaggtttgggtttccttagtgattcccttatcttc
ataaaatgctattttcatggtttgaattgttatatcatgtcattcaattc
tatgtatttttcaaaaccttttataagccttgtcataattctttcaaggc
gtatgtaaaatttgctattttcaagtcttttgcttcatgatcagaataat
ttccttttcttctgagccttgatacgattgcttgttggcaaggaagagtc
atatcttctgtgctctaattgtattttgttcagagtaattccaaggagtt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175817246_175818390
seq2: B6Ng01-248I14.g_68_1218

seq1  GAATTCCTGTCAGGGGTCTGAGTTGACTTACAGATGCTGGAGAGGCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCAGGGGTCTGAGTTGACTTACAGATGCTGGAGAGGCCTGA  50

seq1  GGTTGATCCTCCACAAGGTCAAGGTTGGACATTGCCTGGGACAGCATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATCCTCCACAAGGTCAAGGTTGGACATTGCCTGGGACAGCATGTC  100

seq1  TGTTTGTGTAGACTTATTGTTTGAGTTCTCCTATTTAAAATG-AAAAAAA  149
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTTTGTGTAGACTTATTGTTTGAGTTCTCCTATTTAAAATGAAAAAAAA  150

seq1  AAAAAAGGTTGTTCTCCTTTATACCTTGATAGTTACTTTCAAAGTCACAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGTTGTTCTCCTTTATACCTTGATAGTTACTTTCAAAGTCACAG  200

seq1  ACATTATTGGCACTTTTTCCTTTAGTTTTGTTCACAGAATATCTTTGCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTGGCACTTTTTCCTTTAGTTTTGTTCACAGAATATCTTTGCTC  250

seq1  TCTAATTTTTTCCCTGGAATGACAGCACATCTTTAGATAACTTTACATTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTTTCCCTGGAATGACAGCACATCTTTAGATAACTTTACATTC  300

seq1  CAGATACCTTAACAAAGATTACAAACTACAGTGTGCAAATATGTTTTAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCTTAACAAAGATTACAAACTACAGTGTGCAAATATGTTTTAAA  350

seq1  TATTAGTTTGCTCTCAGTTTTTCTGCCCTCCACTCCATGACTTCTTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTTGCTCTCAGTTTTTCTGCCCTCCACTCCATGACTTCTTCTTT  400

seq1  GTGCCTGCTTGCCGGTTCTTGCTGGGTTCCCCTTTTCTATGCAAGATTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGCTTGCCGGTTCTTGCTGGGTTCCCCTTTTCTATGCAAGATTGT  450

seq1  CCCAACTTCTGCTTTCTAATTGCATCTATTCACCCACCCTTTCCATTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTTCTGCTTTCTAATTGCATCTATTCACCCACCCTTTCCATTTCT  500

seq1  ACCCTCTCTGATGACTTCTTCCTTCCTGCTCATGATCTCTTTTCTACCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCTGATGACTTCTTCCTTCCTGCTCATGATCTCTTTTCTACCTT  550

seq1  TGTGGCTTACTCACAACTTCACATCCGTGTCCCCCACCCCACACACATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTACTCACAACTTCACATCCGTGTCCCCCACCCCACACACATAA  600

seq1  TGTGTAAGTACAATATTTCACATTACAAGTGCTCTTCTGTGATGGAATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGTACAATATTTCACATTACAAGTGCTCTTCTGTGATGGAATGT  650

seq1  GTGGCATAATTGTATTGGACACTGACCACAGATAGATTGGTCAATTACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATAATTGTATTGGACACTGACCACAGATAGATTGGTCAATTACAA  700

seq1  CTTTTACTTGTGTTTTTCTTTGCATTCCACATTCTCTCTAATTAAGATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTTGTGTTTTTCTTTGCATTCCACATTCTCTCTAATTAAGATAT  750

seq1  TAATTTTTCTACTTGTCTTCAAGATCTGAAATCCTCTCGTCTATAATCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCTACTTGTCTTCAAGATCTGAAATCCTCTCGTCTATAATCTG  800

seq1  TTGGAGGAGCCTATATCTGAGATGTTTGACTTCCTAAG-TTTTTTTTTCA  848
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGGAGGAGCCTATATCTGAGATGTTTGACTTCCTAAGTTTTTTTTTTCA  850

seq1  TTTCCAGTTATATTTAA-GTTTGGGTTTCCTTAGTGATT-CCTTATCTTC  896
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  TTTCCAGTTATATTTAAGGTTTGGGTTTCCTTAGTGATTCCCTTATCTTC  900

seq1  ATAAAATGCTATTTTCAT-GTTTGAATTGTTATAATCATGTCATTCAATT  945
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  ATAAAATGCTATTTTCATGGTTTGAATTGTTAT-ATCATGTCATTCAATT  949

seq1  CTATGTA-TTTTCAAAACCTTTATAAAGCCTTGTCATA--TC-TTCAA-G  990
      ||||||| ||||||||||||||   |||||||||||||  || ||||| |
seq2  CTATGTATTTTTCAAAACCTTTTATAAGCCTTGTCATAATTCTTTCAAGG  999

seq1  CGTATGTAAAA-TTGCTATTTCAAAGTC-TTTGCCTCATGATTCAG-ATA  1037
      ||||||||||| |||||||||  ||||| ||||| |||||| |||| |||
seq2  CGTATGTAAAATTTGCTATTTTCAAGTCTTTTGCTTCATGA-TCAGAATA  1048

seq1  AATTTCTTTTC-TCTGAGCC-TGTTACAGATTGC-TGTTTGC-AGGAAGA  1083
      | || |||||| |||||||| || ||| |||||| |||| || |||||||
seq2  ATTTCCTTTTCTTCTGAGCCTTGATAC-GATTGCTTGTTGGCAAGGAAGA  1097

seq1  GTCATATTCTCCTGGTTGCTCTTATTTGTATTTTTGTTCTGGAATCTATA  1133
      |||||| ||| |||  ||||| || ||||| ||||||||   |   ||  
seq2  GTCATA-TCTTCTG--TGCTC-TAATTGTA-TTTTGTTC---AGAGTAAT  1139

seq1  TCCAAGGAGTTA  1145
      ||||||||||||
seq2  TCCAAGGAGTTA  1151