BAC Information

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BAC

Clone NameB6Ng01-251C10
Chromosome1 (Build37)
Map Location 98,157,468 - 98,286,881
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251C10.bB6Ng01-251C10.g
ACCGA058497GA058498
length3721,109
definitionB6Ng01-251C10.b B6Ng01-251C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,157,468 - 98,157,839)(98,285,777 - 98,286,881)
sequence
agtgacatgctgtgaaatgtagaggaagaaaacataattaaacattaatt
ttttaaatagtgatattaaagtgaaaggactatggtgaccatatttactg
tgacatgtgtcatgtgatctgaaagcgtggattttcctctgtgtgttcat
gtatcttatattgattttggagatcacactaattatatcatttatcctct
tttctttcatcactttaaaccctctcgtataaatctctttgattttgatt
tttcaatattactgccattttgttcattaattgttatgtatacatatgtg
tgtgtatatatatatacacacacatacgtatacatatgtgtgtgtgtgtt
tgtgtgtgtatgtgtttgtgtg

gaattctagttgcctttaaactatctgcaaacacatgtatgacttgctgt
atactgctgggattctaagttcaggagggagtgaaaaaatattgagctgc
atgcatatgctcaaccattactaggcaaaaagctggtgcttaattactca
caagaccttcaaagatccctgtgacattgagtgagtattttgaccattaa
taggaccttctttgtctcattttacctgttttagaaaaagaaagcattcc
ttcagtactcgtcttgaataaagttttaaaatacgaagaaaattccacgt
attctataactatacttttagtagtttaagaatttatatgctttattttc
agtgtttaatgtgcatcatgaagcaaacttttataacagtattaggaaat
ccatgtctatgctgcaagtaaccaacacaactgatatagatatagatgta
gatgcagataaaattgtctcaatgttattagaaaatcattaaaaaatagt
tatatgtatcctcctctaggaaagcagagtagtttctgaaataacactgg
ctctgtttccaggaaaatctcaacaaatatgactttctagtatttttaat
ttagtccataaatttatgccatgtggtttgtaccaaaacaaagtcaacct
aacactccccccatgtattggattctgtatatgaaatagtaatgaattta
tctctatattaaatttcacaaaataacttaaagaacaaataaaacagtgc
ctgtatgcctgcatttgtagctagtggctagaaattcatttcctgaacta
ttttatagatgattgttcaaatacttttgcctcaactcactcaattttta
cttatactttcaaaagaaagttaaatattaccttagccattttatttttt
ttaattttaattgtaatggctatatttttattggctattttatttattta
catttcaaatactatcaccctttcctggtttcccctccacaaactcccta
tctcattccttctcccacctgccactatgatgatgctccccccacatgcc
cacaacccacccactccctcttcattgcctagcattctccttacacttgg
ggcatcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98157468_98157839
seq2: B6Ng01-251C10.b_53_424

seq1  AGTGACATGCTGTGAAATGTAGAGGAAGAAAACATAATTAAACATTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATGCTGTGAAATGTAGAGGAAGAAAACATAATTAAACATTAATT  50

seq1  TTTTAAATAGTGATATTAAAGTGAAAGGACTATGGTGACCATATTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAGTGATATTAAAGTGAAAGGACTATGGTGACCATATTTACTG  100

seq1  TGACATGTGTCATGTGATCTGAAAGCGTGGATTTTCCTCTGTGTGTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTGTCATGTGATCTGAAAGCGTGGATTTTCCTCTGTGTGTTCAT  150

seq1  GTATCTTATATTGATTTTGGAGATCACACTAATTATATCATTTATCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTATATTGATTTTGGAGATCACACTAATTATATCATTTATCCTCT  200

seq1  TTTCTTTCATCACTTTAAACCCTCTCGTATAAATCTCTTTGATTTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCATCACTTTAAACCCTCTCGTATAAATCTCTTTGATTTTGATT  250

seq1  TTTCAATATTACTGCCATTTTGTTCATTAATTGTTATGTATACATATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATATTACTGCCATTTTGTTCATTAATTGTTATGTATACATATGTG  300

seq1  TGTGTATATATATATACACACACATACGTATACATATGTGTGTGTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATATATATACACACACATACGTATACATATGTGTGTGTGTGTT  350

seq1  TGTGTGTGTATGTGTTTGTGTG  372
      ||||||||||||||||||||||
seq2  TGTGTGTGTATGTGTTTGTGTG  372


seq1: chr1_98285777_98286881
seq2: B6Ng01-251C10.g_67_1175 (reverse)

seq1  GTTGATGCCCC-AGTGT-AGGAGAATGCTAGGGCAATGAAGAGGGAGTGG  48
      ||||||||||| ||||| |||||||||||| |||||||||||||||||||
seq2  GTTGATGCCCCAAGTGTAAGGAGAATGCTA-GGCAATGAAGAGGGAGTGG  49

seq1  GTGGGTTGGTGGGCATGT-GGGGGAGCATCATCATAGTGGCAGGTGGGAG  97
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  GTGGGTT-GTGGGCATGTGGGGGGAGCATCATCATAGTGGCAGGTGGGAG  98

seq1  AAGGAATGAGATAGGGAGTTTGTGGAGGGGAAACCAGG-AAGGGTGATAG  146
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGAATGAGATAGGGAGTTTGTGGAGGGGAAACCAGGAAAGGGTGATAG  148

seq1  TATTTGAAATGTAAATAAATAAAATAGCCAATAAAAATATAGCCATTACA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAATGTAAATAAATAAAATAGCCAATAAAAATATAGCCATTACA  198

seq1  ATTAAAATT-AAAAAAATAAAATGGCTAAGGTAATATTTAACTTTCTTTT  245
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTAAAAAAAATAAAATGGCTAAGGTAATATTTAACTTTCTTTT  248

seq1  G-AAGTATAAGTAAAAATTGAGTGAGTTGAGGCAAAAGTATTTGAACAAT  294
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATAAGTAAAAATTGAGTGAGTTGAGGCAAAAGTATTTGAACAAT  298

seq1  CATCTATAAAATAGTTCAGGAAATGAATTTCTAGCCACTAGCTACAAATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATAAAATAGTTCAGGAAATGAATTTCTAGCCACTAGCTACAAATG  348

seq1  CAGGCATACAGGCACTGTTTTATTTGTTCTTTAAGTTATTTTGTGAAATT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATACAGGCACTGTTTTATTTGTTCTTTAAGTTATTTTGTGAAATT  398

seq1  TAATATAGAGATAAATTCATTACTATTTCATATACAGAATCCAATACATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAGAGATAAATTCATTACTATTTCATATACAGAATCCAATACATG  448

seq1  GGGGGAGTGTTAGGTTGACTTTGTTTTGGTACAAACCACATGGCATAAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGTGTTAGGTTGACTTTGTTTTGGTACAAACCACATGGCATAAAT  498

seq1  TTATGGACTAAATTAAAAATACTAGAAAGTCATATTTGTTGAGATTTTCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGACTAAATTAAAAATACTAGAAAGTCATATTTGTTGAGATTTTCC  548

seq1  TGGAAACAGAGCCAGTGTTATTTCAGAAACTACTCTGCTTTCCTAGAGGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAGAGCCAGTGTTATTTCAGAAACTACTCTGCTTTCCTAGAGGA  598

seq1  GGATACATATAACTATTTTTTAATGATTTTCTAATAACATTGAGACAATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATATAACTATTTTTTAATGATTTTCTAATAACATTGAGACAATT  648

seq1  TTATCTGCATCTACATCTATATCTATATCAGTTGTGTTGGTTACTTGCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGCATCTACATCTATATCTATATCAGTTGTGTTGGTTACTTGCAG  698

seq1  CATAGACATGGATTTCCTAATACTGTTATAAAAGTTTGCTTCATGATGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACATGGATTTCCTAATACTGTTATAAAAGTTTGCTTCATGATGCA  748

seq1  CATTAAACACTGAAAATAAAGCATATAAATTCTTAAACTACTAAAAGTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAACACTGAAAATAAAGCATATAAATTCTTAAACTACTAAAAGTAT  798

seq1  AGTTATAGAATACGTGGAATTTTCTTCGTATTTTAAAACTTTATTCAAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGAATACGTGGAATTTTCTTCGTATTTTAAAACTTTATTCAAGA  848

seq1  CGAGTACTGAAGGAATGCTTTCTTTTTCTAAAACAGGTAAAATGAGACAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTACTGAAGGAATGCTTTCTTTTTCTAAAACAGGTAAAATGAGACAA  898

seq1  AGAAGGTCCTATTAATGGTCAAAATACTCACTCAATGTCACAGGGATCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTCCTATTAATGGTCAAAATACTCACTCAATGTCACAGGGATCTT  948

seq1  TGAAGGTCTTGTGAGTAATTAAGCACCAGCTTTTTGCCTAGTAATGGTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCTTGTGAGTAATTAAGCACCAGCTTTTTGCCTAGTAATGGTTG  998

seq1  AGCATATGCATGCAGCTCAATATTTTTTCACTCCCTCCTGAACTTAGAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGCATGCAGCTCAATATTTTTTCACTCCCTCCTGAACTTAGAAT  1048

seq1  CCCAGCAGTATACAGCAAGTCATACATGTGTTTGCAGATAGTTTAAAGGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAGTATACAGCAAGTCATACATGTGTTTGCAGATAGTTTAAAGGC  1098

seq1  AACTAGAATTC  1105
      |||||||||||
seq2  AACTAGAATTC  1109


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