MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-252N09
Chromosome	1 (Build37)
Map Location	38,996,590 - 38,997,663
singlet/doublet	singlet
Overlap gene	Nms
Upstream gene	2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3, Lonrf2, Chst10, EG625775
Downstream gene	Pdcl3, Npas2, LOC100041999, Rpl31, Tbc1d8, D1Bwg0212e, Rnf149, EG329126, Creg2, 4933400N17Rik, LOC100042065, Map4k4
Link	Open Mouse BAC browser

Click to get alignment info.

name	2300002O18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69541 MGI:1916791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98258 MGI:2138153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666434 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666434 MGI:3649002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs

name	Eif5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226982 MGI:2441772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rev1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56210 MGI:1929074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG329123 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329123 MGI:3644917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Aff3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16764 MGI:106927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 2 Proteins

name	Lonrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381338 MGI:1920209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chst10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98388 MGI:2138283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625775 MGI:3647848
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins pseudo : _no_value

name	Nms (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433292 MGI:3583618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdcl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68833 MGI:1916083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npas2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18143 MGI:109232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041999 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 2 Proteins

name	Rpl31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114641 MGI:2149632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54610 MGI:1927225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D1Bwg0212e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52846 MGI:106580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf149 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67702 MGI:2677438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG329126 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329126 MGI:3644919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins pseudo : _no_value

name	Creg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:263764 MGI:1928333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933400N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619289 MGI:3588206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	LOC100042065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Map4k4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26921 MGI:1349394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2300002O18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802162 GeneID:69541 MGI:1916791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2300002O18 gene transcript_id : NM_027111.3

name	Txndc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802781 GeneID:98258 MGI:2138153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 9 transcript_id : NM_172054.4

name	EG666434 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363313 GeneID:666434 MGI:3649002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs product : predicted gene, EG666434 transcript_id : XM_983830.1

name	Eif5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84043960 GeneID:226982 MGI:2441772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 5B transcript_id : NM_198303.2

name	Rev1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50811869 GeneID:56210 MGI:1929074
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : REV1 homolog (S. cerevisiae) transcript_id : NM_019570.3

name	EG329123 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363315 GeneID:329123 MGI:3644917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG329123 transcript_id : XM_286973.3

name	Aff3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233821 GeneID:16764 MGI:106927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 2 Proteins product : AF4/FMR2 family, member 3 transcript_id : XM_001477293.1

name	Lonrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274157 GeneID:381338 MGI:1920209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LON peptidase N-terminal domain and ring finger 2 transcript_id : NM_001029878.1

name	Chst10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70908367 GeneID:98388 MGI:2138283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbohydrate sulfotransferase 10 transcript_id : NM_145142.2

name	Nms (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58652150 GeneID:433292 MGI:3583618
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuromedin S transcript_id : NM_001011684.1

name	Pdcl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382228 GeneID:68833 MGI:1916083
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosducin-like 3 transcript_id : NM_026850.3

name	Npas2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679101 GeneID:18143 MGI:109232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuronal PAS domain protein 2 transcript_id : NM_008719.1

name	LOC100041999 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233827 GeneID:100041999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 2 Proteins product : similar to Ribosomal protein L17 transcript_id : XM_001477395.1

name	Rpl31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347404 GeneID:114641 MGI:2149632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L31 transcript_id : NM_053257.2

name	Tbc1d8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379940 GeneID:54610 MGI:1927225
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 8 transcript_id : NM_018775.3

name	D1Bwg0212e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542465 GeneID:52846 MGI:106580
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed transcript_id : NM_028043.2

name	Rnf149 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376002 GeneID:67702 MGI:2677438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 149 transcript_id : NM_001033135.2

name	Creg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76096370 GeneID:263764 MGI:1928333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cellular repressor of E1A-stimulated genes 2 transcript_id : NM_170597.4

name	4933400N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363319 GeneID:619289 MGI:3588206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : RIKEN cDNA 4933400N17 gene transcript_id : XM_890488.2

name	LOC100042065 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233831 GeneID:100042065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100042065 transcript_id : XM_001477599.1

name	Map4k4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679059 GeneID:26921 MGI:1349394
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase kinase 4 transcript_id : NM_008696.1

name	2300002O18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113931148 GeneID:69541 MGI:1916791
definition	GO_function : GO:0003796 - lysozyme activity [Evidence IEA] GO_process : GO:0016998 - cell wall catabolism [Evidence IEA]; GO:0009253 - peptidoglycan catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69541 protein_id : NP_081387.1

name	Txndc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25286717 CCDS:CCDS14898.1 GeneID:98258 MGI:2138153
definition	codon_start : 1 product : ATP binding protein associated with cell differentiation protein_id : NP_742051.1

name	EG666434 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363314 GeneID:666434 MGI:3649002
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988924.1

name	Eif5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84043961 GeneID:226982 MGI:2441772
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 5B protein_id : NP_938045.2

name	Rev1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254551 CCDS:CCDS14899.1 GeneID:56210 MGI:1929074
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0017125 - deoxycytidyl transferase activity [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA]; GO:0042276 - error-prone postreplication DNA repair [Evidence ISS] [Evidence IDA]; GO:0006280 - mutagenesis [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : REV1-like protein_id : NP_062516.2

name	EG329123 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363316 GeneID:329123 MGI:3644917
definition	codon_start : 1 product : hypothetical protein protein_id : XP_286973.2

name	Aff3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233822 GeneID:16764 MGI:106927
definition	codon_start : 1 product : similar to AF4/FMR2 family member 3 (Protein LAF-4) (Lymphoid nuclear protein related to AF4) protein_id : XP_001477343.1

name	Lonrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274158 CCDS:CCDS14900.1 GeneID:381338 MGI:1920209
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 product : LON peptidase N-terminal domain and ring finger 2 protein_id : NP_001025049.1

name	Chst10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70908368 CCDS:CCDS14901.1 GeneID:98388 MGI:2138283
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008146 - sulfotransferase activity [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0007612 - learning [Evidence IMP]; GO:0007616 - long-term memory [Evidence IMP] codon_start : 1 note : HNK-1 sulfotransferase product : carbohydrate sulfotransferase 10 protein_id : NP_660124.2

name	Nms (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58652151 CCDS:CCDS14902.1 GeneID:433292 MGI:3583618
definition	GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence ISS] GO_process : GO:0045475 - locomotor rhythm [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence ISS]; GO:0006940 - regulation of smooth muscle contraction [Evidence IEA] codon_start : 1 product : neuromedin S protein_id : NP_001011684.1

name	Pdcl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560120 CCDS:CCDS14903.1 GeneID:68833 MGI:1916083
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : IAP-associated factor VIAF1 product : phosducin-like 3 protein_id : NP_081126.2

name	Npas2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679102 GeneID:18143 MGI:109232
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0042745 - circadian sleep/wake cycle [Evidence IMP]; GO:0045475 - locomotor rhythm [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : neuronal PAS domain protein 2 protein_id : NP_032745.1

name	LOC100041999 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233828 GeneID:100041999
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477445.1

name	Rpl31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716589 CCDS:CCDS14904.1 GeneID:114641 MGI:2149632
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L31 protein_id : NP_444487.1

name	Tbc1d8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82524296 CCDS:CCDS14905.1 GeneID:54610 MGI:1927225
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : BUB2-like protein 1; GRAM domain; vascular Rab-GAP/TBC-containing product : TBC1 domain family, member 8 protein_id : NP_061245.2

name	D1Bwg0212e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26553441 CCDS:CCDS14906.1 GeneID:52846 MGI:106580
definition	codon_start : 1 product : hypothetical protein LOC52846 protein_id : NP_082319.1

name	Rnf149 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677536 CCDS:CCDS14907.1 GeneID:67702 MGI:2677438
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ring finger protein 149 protein_id : NP_001028307.1

name	Creg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24528565 CCDS:CCDS14908.1 GeneID:263764 MGI:1928333
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA] codon_start : 1 product : cellular repressor of E1A-stimulated genes 2 protein_id : NP_733485.1

name	4933400N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82879020 GeneID:619289 MGI:3588206
definition	codon_start : 1 product : similar to FLJ42986 protein protein_id : XP_895581.1

name	LOC100042065 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233832 GeneID:100042065
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477649.1

name	Map4k4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679060 GeneID:26921 MGI:1349394
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0006950 - response to stress [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy note : NCK interacting kinase; HPK/GCK-like kinase product : mitogen-activated protein kinase kinase kinase kinase 4 protein_id : NP_032722.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128886
definition	standard_name : D1Mit518

name	(CDS detail)
type	STS
link
xref	UniSTS:207146
definition	standard_name : BB201698

name	(CDS detail)
type	STS
link
xref	UniSTS:165073
definition	standard_name : AI098020

name	(CDS detail)
type	STS
link
xref	UniSTS:161849
definition	standard_name : RH125027

name	(CDS detail)
type	STS
link
xref	UniSTS:234111
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207147
definition	standard_name : AU022044

name	(CDS detail)
type	STS
link
xref	UniSTS:207148
definition	standard_name : RH126814

name	(CDS detail)
type	STS
link
xref	UniSTS:22322
definition	standard_name : STS-D80227

name	(CDS detail)
type	STS
link
xref	UniSTS:234112
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128679
definition	standard_name : D1Mit321

name	(CDS detail)
type	STS
link
xref	UniSTS:185434
definition	standard_name : AW556253

name	(CDS detail)
type	STS
link
xref	UniSTS:165074
definition	standard_name : AI851349

name	(CDS detail)
type	STS
link
xref	UniSTS:15159
definition	standard_name : D5S1969

name	(CDS detail)
type	STS
link
xref	UniSTS:234113
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158788
definition	standard_name : AU041319

name	(CDS detail)
type	STS
link
xref	UniSTS:178379
definition	standard_name : AI507003

name	(CDS detail)
type	STS
link
xref	UniSTS:158787
definition	standard_name : 11.MHAa63e11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:207150
definition	standard_name : RH126785

name	(CDS detail)
type	STS
link
xref	UniSTS:128457
definition	standard_name : D1Mit123

name	(CDS detail)
type	STS
link
xref	UniSTS:144052
definition	standard_name : Npas2

name	(CDS detail)
type	STS
link
xref	UniSTS:234118
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:233030
definition	standard_name : RH143784

name	(CDS detail)
type	STS
link
xref	UniSTS:142228
definition	standard_name : D1Bwg0212e

name	(CDS detail)
type	STS
link
xref	UniSTS:165075
definition	standard_name : AV037261

name	(CDS detail)
type	STS
link
xref	UniSTS:162744
definition	standard_name : RH126032

name	(CDS detail)
type	STS
link
xref	UniSTS:123988
definition	standard_name : 32.MMHAP53FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:167263
definition	standard_name : D1Ertd259e

name	(CDS detail)
type	STS
link
xref	UniSTS:125393
definition	standard_name : MHAa84g6.seq

name	EG625775 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363317 GeneID:625775 MGI:3647848
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins product : predicted gene, EG625775 pseudo : _no_value transcript_id : XR_001877.1

name	EG329126 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363318 GeneID:329126 MGI:3644919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins product : predicted gene, EG329126 pseudo : _no_value transcript_id : XR_001880.1

clone name	MSMg01-427A12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-293L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-475J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-497P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458C03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-522E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-252N09.b
ACC	GA059725
length	1,075
definition	B6Ng01-252N09.b
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctatcagggaaattggaaggtgagcgtccctcggacgctgtccac ggtgctgaccgggtgctgcatctctggtttttgggcagtttatagggagt cagaagtggggagaagggtctgaagtccttgatcagatcagcatctccag ggagtttgccacagagtgcaggaaactaggctattgatggagagccatga ttggaaacagggactattaagacttttccattagaattttgatttagagg catagggaaccttgggaaaacacagtgtttgttttctcttaaagagtaat tgcagcacttggccactgtgagacatggtattatcttaacatctccagag catcaggtatcctctatggttcccagctcatcttctagacaatgttcagt tactttgtctaaccttcagctcactgacagccccagacaatcagctgctg cccctctggattcttataaaatcttgctcatggtttgcttttgaaatttt ggtttttaatctaattgtctgcatatttctatccatcctcccctattttt ctatttgatttggtcttcatctttgtattaacacagacttctcagtaaga cctcgtggggttggtttgcagtacctcctgttatcaaatgatcacaatca taaaaaatatatttatactaagctgcaacatcctaacatctgatttcaaa acaggcattcttgttaagatctgcagagctatgcaggattcaatgaagat tccttgcttgtgacagttctcaaaataattgaagagatttaacatataca ttctaatttctgtccttctagagaaaactatatgcacctttaattctaca ttactttgtatcctttcaagtcaagtgttattcttcaaggcttgaacatt attgttaaaatatgccagaatattggtttggctttctcttgactcagatt gcagagagcaaatagctgccactgtgtgtgtgtgtgtatgtgtatgcatg tatctgtgcatgcctgtatgtatgtgtctgtgttaatgttgtgtgcatgc atgtatgtgtgtatatatgtatgta
quality values	Open. Hide. 46 11 38 32 62 62 62 56 43 33 39 56 49 44 44 62 37 44 62 62 43 62 59 59 59 36 62 62 62 49 43 49 56 38 35 28 27 23 25 26 22 25 31 35 42 54 62 59 59 62 54 54 54 54 62 62 62 59 59 62 54 54 62 59 62 62 62 62 62 62 62 62 62 59 56 59 56 48 48 50 56 56 56 54 46 48 48 59 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 54 54 62 62 62 62 62 54 62 62 62 62 62 62 54 54 62 59 54 62 62 59 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 59 59 62 62 62 50 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 43 62 62 62 54 62 62 62 58 58 40 58 58 58 58 58 58 54 58 58 54 58 58 58 52 58 54 54 54 58 58 58 58 58 58 54 54 42 54 54 54 54 38 58 58 58 47 42 58 58 58 49 38 54 54 45 47 58 58 58 54 52 49 54 50 46 58 58 54 58 54 58 52 54 50 49 49 48 58 58 58 58 51 45 58 50 54 39 58 58 51 50 58 58 58 58 58 58 50 51 54 51 52 46 58 46 52 52 51 58 37 47 58 48 54 54 54 51 39 50 49 50 58 53 58 49 48 44 49 50 58 54 49 58 39 29 58 50 37 24 58 58 50 50 41 36 58 43 37 53 58 53 54 49 58 51 51 49 49 32 53 34 52 52 50 53 53 39 41 18 50 51 39 45 52 49 42 33 54 34 18 54 42 30 51 49 51 44 51 37 40 24 32 28 44 44 32 53 42 46 49 51 37 53 40 37 26 32 37 51 52 42 37 25 54 54 38 42 39 27 31 54 41 42 53 39 54 29 45 28 54 47 25 22 32 31 41 52 32 37 45 26 41 41 32 31 32 52 32 52 52 52 31 51 32 31 39 32 41 29 30 28 24 53 29 51 46 46 31 26 31 31 30 30 30 30 30 28 26 31 31 51 31 31 30 16 31 32 31 36 37 32 35 36 33 31 31 48 32 36 31 31 31 28 43 37 48 32 36 24 31 33 32 19 8 9 18 11 31 26 36 31 24 43 32 29 42 30 17 18 23 20 24 39 31 31 24 33 24 31 31 31 31 30 33 34 11 33 33 48 48 36 34 34 31 27 22 33 21 9 41 25 21 17 27 22 22 25 20 44 37 20 28 21 30 48 37 33 27 24 9 31 21 22 21 29 26 13 14 42 21 23 29 17 21 14 38 11 31 14 19 17 43 30 19 24 28 32 34 27 22 21 14 16 22 30 11 30 19 33 12 20 15 12 6 24 16 21 22 32 27 21 14 12 5 14 14 29 29 17 21 34 22 32 25 27 22 33 13 15 20 20 27 20 14 21 5 6 5 16 6 11 21 21 15 21 14 27 16 32 16 22 11 7 3 3 3 3 5 9 5 8 21 10 14 6 9 19 24 28 24 28 16 20 19 8 12 10 23 13 32 10 8 3 8 11 14 7 11 16 27 10 9 5 15 4 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_38996590_38997663
seq2: B6Ng01-252N09.b_47_1121

seq1  GAATTCTATCAGGGAAATTGGAAGGTGAGCGTCCCTCGGACGCTGTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGGGAAATTGGAAGGTGAGCGTCCCTCGGACGCTGTCCAC  50

seq1  GGTGCTGACCGGGTGCTGCATCTCTGGTTTTTGGGCAGTTTATAGGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGACCGGGTGCTGCATCTCTGGTTTTTGGGCAGTTTATAGGGAGT  100

seq1  CAGAAGTGGGGAGAAGGGTCTGAAGTCCTTGATCAGATCAGCATCTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGGGGAGAAGGGTCTGAAGTCCTTGATCAGATCAGCATCTCCAG  150

seq1  GGAGTTTGCCACAGAGTGCAGGAAACTAGGCTATTGATGGAGAGCCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGCCACAGAGTGCAGGAAACTAGGCTATTGATGGAGAGCCATGA  200

seq1  TTGGAAACAGGGACTATTAAGACTTTTCCATTAGAATTTTGATTTAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACAGGGACTATTAAGACTTTTCCATTAGAATTTTGATTTAGAGG  250

seq1  CATAGGGAACCTTGGGAAAACACAGTGTTTGTTTTCTCTTAAAGAGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGAACCTTGGGAAAACACAGTGTTTGTTTTCTCTTAAAGAGTAAT  300

seq1  TGCAGCACTTGGCCACTGTGAGACATGGTATTATCTTAACATCTCCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCACTTGGCCACTGTGAGACATGGTATTATCTTAACATCTCCAGAG  350

seq1  CATCAGGTATCCTCTATGGTTCCCAGCTCATCTTCTAGACAATGTTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTATCCTCTATGGTTCCCAGCTCATCTTCTAGACAATGTTCAGT  400

seq1  TACTTTGTCTAACCTTCAGCTCACTGACAGCCCCAGACAATCAGCTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTCTAACCTTCAGCTCACTGACAGCCCCAGACAATCAGCTGCTG  450

seq1  CCCCTCTGGATTCTTATAAAATCTTGCTCATGGTTTGCTTTTGAAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTGGATTCTTATAAAATCTTGCTCATGGTTTGCTTTTGAAATTTT  500

seq1  GGTTTTTAATCTAATTGTCTGCATATTTCTATCCATCCTCCCCTATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAATCTAATTGTCTGCATATTTCTATCCATCCTCCCCTATTTTT  550

seq1  CTATTTGATTTGGTCTTCATCTTTGTATTAACACAGACTTCTCAGTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGATTTGGTCTTCATCTTTGTATTAACACAGACTTCTCAGTAAGA  600

seq1  CCTCGTGGGGTTGGTTTGCAGTACCTCCTGTTATCAAATGATCACAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGGGGTTGGTTTGCAGTACCTCCTGTTATCAAATGATCACAATCA  650

seq1  TAAAAAATATATTTATACTAAGCTGCAACATCCTAACATCTGATTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATATATTTATACTAAGCTGCAACATCCTAACATCTGATTTCAAA  700

seq1  ACAGGCATTCTTGTTAAGATCTGCAGAGCTATGCAGGATTCAATGAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATTCTTGTTAAGATCTGCAGAGCTATGCAGGATTCAATGAAGAT  750

seq1  TCCTTGCTTGTGACAGTTCTCAAAATAATTGAAGAGATTTAACATATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCTTGTGACAGTTCTCAAAATAATTGAAGAGATTTAACATATACA  800

seq1  TTCTAATTTCTGTCCTTCTAGAGAAAACTATATGCACCTTTAATTCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTTCTGTCCTTCTAGAGAAAACTATATGCACCTTTAATTCTACA  850

seq1  TTACTTTGTATCCTTTCAAGTCAGGTGTTATTCTTCAAGGCTTGAACATT  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTACTTTGTATCCTTTCAAGTCAAGTGTTATTCTTCAAGGCTTGAACATT  900

seq1  ATTGTTAAAATATGCCAGAATATTGGTTTGGCTTTCTCTTGACTCAGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAAAATATGCCAGAATATTGGTTTGGCTTTCTCTTGACTCAGATT  950

seq1  GCAGAGAGCAAATAGCTGCCACTGTGTGTGTGTGTGTATGTGTATGCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGCAAATAGCTGCCACTGTGTGTGTGTGTGTATGTGTATGCATG  1000

seq1  TATCTGTGCATGCCTGTATGTATGTGTCTGTGTATATG-TGTGTGCATGC  1049
      |||||||||||||||||||||||||||||||||  ||| |||||||||||
seq2  TATCTGTGCATGCCTGTATGTATGTGTCTGTGTTAATGTTGTGTGCATGC  1050

seq1  ATGTATGTGTGTATATATGTATGTA  1074
      |||||||||||||||||||||||||
seq2  ATGTATGTGTGTATATATGTATGTA  1075

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information