BAC Information

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BAC

Clone NameB6Ng01-254G14
Chromosome1 (Build37)
Map Location 84,256,148 - 84,349,491
singlet/doubletdoublet
Overlap gene5033414K04Rik, LOC100039638
Upstream gene4930544G21Rik, EG622958
Downstream geneDner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254G14.bB6Ng01-254G14.g
ACCGA060882GA060883
length1,157813
definitionB6Ng01-254G14.b B6Ng01-254G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,256,148 - 84,257,301)(84,348,680 - 84,349,491)
sequence
gggaattctttgtttagctctgtaccccatttttaatagggttatttgat
tttctggaatccagcttcttaagttttttgtatatattggatattagtcc
cctatcagatttaggataggtaaagatcctttcccaatctgttggtagcc
tttttctcttattgacagtatctttggccttacagaagctttgcaatttt
aggaggtccatttgttgattctcgatcttacagcataagccattgctgtt
ctgttcaggaatttttctcctgtgcccatctgacttcaattctaagtcaa
cccaaaattcttcttcttctttttttttttttttaatattttattcctta
aagtgaaggagttgaactacatcaggattcccagctcaggaacctacaag
gaccaacaggctgggtatgtaacctaaggaaaccaataccgttggaggct
ccatgagctctactaaagcaaagtacaagccctgcctccaaaccttcatt
tttcaagagaatcataaagtccaacttgccttataaattcctagcatttt
tcaaccccagaaactaatttataagatttttatatatactgaaagagcca
gtggcagcatttctgcaaactggagccaaacttcaggtccacatgttgtc
aactccaggagtccaggttctgtactgaggctcccagggccgtggaaatt
cccacttttaaagatctggggctatcacctgtctcttagaaacacattga
gcactggcctctaagatcatgagaaatcctgtcacgtgtgaccagactcg
gtttgtttcatctatggcttcccaaacttgttcaaattctggactctttg
cagtaggatccataagagcaaccaccatgggaaacaccaaaaatctgttc
gctactcaactctacaggttgtacatttcttattctgtgtttacccttgg
agctaaattagaaatttactgagcccagtgggggtagtaggagactacac
aagcttctttacagaccatattactttcagctacattcacaggcacccaa
gggcctaatgttcattatctcactttcagtgagaaaatattattaccgaa
accaaatcgaagcctgaggcatttccttgtgtgtaacgccagggtgcatg
catgggt
gaattccacatctcttagttttccttttaaggagactgaagctagaagga
aagggagacctccttgggccctcagtagtgagaaaacaaagtttccaata
aggatatgattgggcacagatgtggacagaagctatctgtacttggtgga
taccttgttttcttaccctacacatcttatcctgggagaaggcagtgctg
gagaatgtatatactggaagagctgtaaatattgggggtgatgggtgatg
gacagttgacctcttcagtatttccatttcaaaacatttaagtaatggga
gagatcccttatgaagatagatcatggacctaaaatatatctcctaagag
ggcatggtcaactgcagaaggaccatcttgctgaggaagctcattgtaac
cactaaacacaagcttcttaagagacagtggccatcattcacaaggactc
aagtatgacaggcgtgctccatattccgttatagaattatagaaatttct
gtatatgagctccatattctgttatagaaatggtgtctgtccatcaataa
gacaaaaacgtcaccaacagattgggaaaggatctttacctatcctaaat
cagataggggactaatatccaatatatataaagaactcaagaaggtggac
ttcagaaaatcaaataaccccgttaaaaaatggggtacagagctaaacaa
agaattctcacttgaggaatactgaatggctgaaagcaccttgaaattaa
tgtcaacatccttaatcatcagggaaatgcaaatcaaaacaacccttgag
attccagctcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84256148_84257301
seq2: B6Ng01-254G14.b_45_1199

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGATTT  50

seq1  TCTGGAATCCAGCTTCTTAAGTTTTTTGTATATATTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATCCAGCTTCTTAAGTTTTTTGTATATATTGGATATTAGTCCCC  100

seq1  TATCAGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTAGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTAGCCTT  150

seq1  TTTCTCTTATTGACAGTATCTTTGGCCTTACAGAAGCTTTGCAATTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTATTGACAGTATCTTTGGCCTTACAGAAGCTTTGCAATTTTAG  200

seq1  GAGGTCCATTTGTTGATTCTCGATCTTACAGCATAAGCCATTGCTGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCATTTGTTGATTCTCGATCTTACAGCATAAGCCATTGCTGTTCT  250

seq1  GTTCAGGAATTTTTCTCCTGTGCCCATCTGACTTCAATTCTAAGTCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGAATTTTTCTCCTGTGCCCATCTGACTTCAATTCTAAGTCAACC  300

seq1  CAAAATTCTTCTTCTTCTTTTTTTTTTTTTTTAATATTTTATTCCTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCTTCTTCTTCTTTTTTTTTTTTTTTAATATTTTATTCCTTAAA  350

seq1  GTGAAGGAGTTGAACTACATCAGGATTCCCAGCTCAGGAACCTACAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAGTTGAACTACATCAGGATTCCCAGCTCAGGAACCTACAAGGA  400

seq1  CCAACAGGCTGGGTATGTAACCTAAGGAAACCAATACCGTTGGAGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGCTGGGTATGTAACCTAAGGAAACCAATACCGTTGGAGGCTCC  450

seq1  ATGAGCTCTACTAAAGCAAAGTACAAGCCCTGCCTCCAAACCTTCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTCTACTAAAGCAAAGTACAAGCCCTGCCTCCAAACCTTCATTTT  500

seq1  TCAAGAGAATCATAAAGTCCAACTTGCCTTATAAATTCCTAGCATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGAATCATAAAGTCCAACTTGCCTTATAAATTCCTAGCATTTTTC  550

seq1  AACCCCAGAAACTAATTTATAAGATTTTTATATATACTGAAAGAGCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGAAACTAATTTATAAGATTTTTATATATACTGAAAGAGCCAGT  600

seq1  GGCAGCATTTCTGCAAACTGGAGCCAAACTTCAGGTCCACATGTTGTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCATTTCTGCAAACTGGAGCCAAACTTCAGGTCCACATGTTGTCAA  650

seq1  CTCCAGGAGTCCAGGTTCTGTACTGAGGCTCCCAGGGCCGTGGAAATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAGTCCAGGTTCTGTACTGAGGCTCCCAGGGCCGTGGAAATTCC  700

seq1  CACTTTTAAAGATCTGGGGCTATCACCTGTCTCTTAGAAACACATTGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAAAGATCTGGGGCTATCACCTGTCTCTTAGAAACACATTGAGC  750

seq1  ACTGGCCTCTAAGATCATGAGAAATCCTGTCACGTGTGACCAGACTCGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTCTAAGATCATGAGAAATCCTGTCACGTGTGACCAGACTCGGT  800

seq1  TTGTTTCATCTATGGCTTCCCAAACTTGTTCAAATTCTGGACTCTTTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCATCTATGGCTTCCCAAACTTGTTCAAATTCTGGACTCTTTGCA  850

seq1  GTAAGATCCATAAGAGCAACCACCATGGGAAACACCAAAAATCTGTTCGC  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATCCATAAGAGCAACCACCATGGGAAACACCAAAAATCTGTTCGC  900

seq1  TACTCAACTCTACA-GTTGTACATTTC-TATTCTGTGTTTACCCTTGGAG  948
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  TACTCAACTCTACAGGTTGTACATTTCTTATTCTGTGTTTACCCTTGGAG  950

seq1  CTAAATTAG-AATTTACTGAGCCCAGT-GGGGTAGTA-GAGACTACACAA  995
      ||||||||| ||||||||||||||||| ||||||||| ||||||||||||
seq2  CTAAATTAGAAATTTACTGAGCCCAGTGGGGGTAGTAGGAGACTACACAA  1000

seq1  GGCTCTTTACAGACCATA-TAC-TCCAGCTAACATTCACA-GCACCC-AG  1041
      |  ||||||||||||||| ||| | ||||| ||||||||| |||||| ||
seq2  GCTTCTTTACAGACCATATTACTTTCAGCT-ACATTCACAGGCACCCAAG  1049

seq1  GGCTAAATG-TCATTATCCCACTTTTCAGGTTGAGAAAATATATACACAA  1090
      |||  |||| |||||||| ||| ||||||  |||||||||||    ||  
seq2  GGCCTAATGTTCATTATCTCAC-TTTCAG--TGAGAAAATATTATTACCG  1096

seq1  ACACAAAACCGAGGCCCTGAGGCGATTCCCTGTGTGTAGACAGGCAAGGT  1140
      | || ||| ||| | ||||||||  |||| ||||||||   | || ||| 
seq2  AAACCAAATCGAAG-CCTGAGGCATTTCCTTGTGTGTA---ACGCCAGG-  1141

seq1  GTGCATGCATGGGT  1154
      ||||||||||||||
seq2  GTGCATGCATGGGT  1155

seq1: chr1_84348680_84349491
seq2: B6Ng01-254G14.g_70_882 (reverse)

seq1  TGTGAGCTGGAATCTC-AGGGTTGTTTTGATTTGCATTTCCCTGATGATT  49
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTGAGCTGGAATCTCAAGGGTTGTTTTGATTTGCATTTCCCTGATGATT  50

seq1  AAGGATGCTGAACATT-ATTTC-AGGTGCTTCTCAGCCATTCAGTATTCC  97
      ||||||| || ||||| ||||| |||||||| ||||||||||||||||||
seq2  AAGGATGTTG-ACATTAATTTCAAGGTGCTT-TCAGCCATTCAGTATTCC  98

seq1  TCAGGTGAGAATTCTTTGTTTAGCTCTGTACCCCATTTTTTAACGGGGTT  147
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGAGAATTCTTTGTTTAGCTCTGTACCCCATTTTTTAACGGGGTT  148

seq1  ATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATATTGGATA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATATTGGATA  198

seq1  TTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTT  248

seq1  GGTGACGTTTTTGTCTTATTGATGGACAGACACCATTTCTATAACAGAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACGTTTTTGTCTTATTGATGGACAGACACCATTTCTATAACAGAAT  298

seq1  ATGGAGCTCATATACAGAAATTTCTATAATTCTATAACGGAATATGGAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCTCATATACAGAAATTTCTATAATTCTATAACGGAATATGGAGC  348

seq1  ACGCCTGTCATACTTGAGTCCTTGTGAATGATGGCCACTGTCTCTTAAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTGTCATACTTGAGTCCTTGTGAATGATGGCCACTGTCTCTTAAGA  398

seq1  AGCTTGTGTTTAGTGGTTACAATGAGCTTCCTCAGCAAGATGGTCCTTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTGTTTAGTGGTTACAATGAGCTTCCTCAGCAAGATGGTCCTTCT  448

seq1  GCAGTTGACCATGCCCTCTTAGGAGATATATTTTAGGTCCATGATCTATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGACCATGCCCTCTTAGGAGATATATTTTAGGTCCATGATCTATC  498

seq1  TTCATAAGGGATCTCTCCCATTACTTAAATGTTTTGAAATGGAAATACTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGGGATCTCTCCCATTACTTAAATGTTTTGAAATGGAAATACTG  548

seq1  AAGAGGTCAACTGTCCATCACCCATCACCCCCAATATTTACAGCTCTTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCAACTGTCCATCACCCATCACCCCCAATATTTACAGCTCTTCC  598

seq1  AGTATATACATTCTCCAGCACTGCCTTCTCCCAGGATAAGATGTGTAGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATACATTCTCCAGCACTGCCTTCTCCCAGGATAAGATGTGTAGGG  648

seq1  TAAGAAAACAAGGTATCCACCAAGTACAGATAGCTTCTGTCCACATCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAACAAGGTATCCACCAAGTACAGATAGCTTCTGTCCACATCTGT  698

seq1  GCCCAATCATATCCTTATTGGAAACTTTGTTTTCTCACTACTGAGGGCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATCATATCCTTATTGGAAACTTTGTTTTCTCACTACTGAGGGCCC  748

seq1  AAGGAGGTCTCCCTTTCCTTCTAGCTTCAGTCTCCTTAAAAGGAAAACTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTCTCCCTTTCCTTCTAGCTTCAGTCTCCTTAAAAGGAAAACTA  798

seq1  AGAGATGTGGAATTC  812
      |||||||||||||||
seq2  AGAGATGTGGAATTC  813