BAC Information

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BAC

Clone NameB6Ng01-254H02
Chromosome1 (Build37)
Map Location 126,843,197 - 126,966,944
singlet/doubletdoublet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254H02.bB6Ng01-254H02.g
ACCGA060906GA060907
length1,1141,086
definitionB6Ng01-254H02.b B6Ng01-254H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,965,835 - 126,966,944)(126,843,197 - 126,844,283)
sequence
gaattcattgacatactacacagcatttgctttctaagggggcttcatta
gttttctgtgattaataatcatttgtgtgtatgcatgtattcatttgctt
gtttattcttagggaatttttgtactgggctgaatttaaaaaaaaaatag
ccattatctttgaaaagaactttccgtcaactcctccaaagcacataacg
ttctcaaaagacatcctaacagaggtgcagattttatatggttttttttt
tttttttttgcattttctgcatcagtggtaacagaagataatttgttatg
gatatacctatatcttttgatttttttctcgagaaccaagaacttgtgca
tagcgccaaatctatatgcttggaatgagaaatatctttggaatgaatta
tccaaaatggttggtttcactcttaggaaaaatgactagatgggtttgtt
ggacagttaactattgagtaaatacattgctgttaaaatccattaaggtt
ttcaaaataataaacaactattaccatattgcaaaataatatacagcaat
aactattattacattgtcattgcatttattatatatatatatgtgtgtgc
acatgtgagggtcagcttgcaggcatcaccttgctctaccatgtgggtca
gtgtggatgggaatccagctcaagtcatcaggcttggtagtaagcccctg
tacctgcccagctgcctcattagccgtcatacaacatttttagaaaattt
tttattagatattttctccatttacattttaaatgctatcccaaaagtcc
tctattaccctcgccccgccctgctcccctacccacccactcccactttc
ttggccctggcattcccctgtactggggcatattaaagttttgcaagacc
aaggggcctctcttcccaatgatggccgactaggccatcatatgcagcta
tagacacaagctctgggggaggaggtactgattagtcatattgtttgtcc
acctataggattgcagagccttcagctctttgggttactttcttcttagc
tccctcatttgggggcctgttgctcggtctatgaatgactggtgagcatt
cacttcatatttgc
gaattcctggaattacatgatgaagttatgattgctctttcaaattttgt
gtcctggagttcatttattcattaatagatatttctgcatgactgctgag
agtattggtggatatacatttatcatttatattatttacatgttagaatg
ggagctaggtatgtggacttcttcattagttctgtgtctggtatggacag
agcaggttggggcaccagacagtctgtacatgctgggttgagtgtaagga
ttggatatggctcagttgtattgaagtcagggggacatagagaacttcgc
tggtgagcaggatatttatcctggatcaagcctagagtatggggtagatc
ttagtgttggggaagatatatgctgaatcaggaattctgatctcgctaga
caaggagaatgatgtgcaggatctggtagggtagaaaggttagatgtagc
atgggtaaggtctgtcaatcatgggcaggcaaggcatgtcctgtcagaag
cctagaggttggtcgggatgcaggtagtggtggccagagtaggccagggc
attggatgtgagatgtagtctggatctcaggagggtgcttggaaagaaga
cttggaatgactcatctaactagaccctagacaaggacatccacaggctg
atttttaaagcaggtcacgtgagtggctaaaacaacctgaaaagaggact
ttttgttattctctcactagagaaagaagcagataaattagtcttttatt
gttattctctcatatgttaccccctgaccatagtttcccttttcttaatt
cttcccagtcctcctcctcactttcctctccaccagatttactcttcctc
cacttctccatttcccttttaaaaaaaattaggccattcagttatattaa
tggcacacagtatacaaattaccaataggatttagactcccacatttagg
actggacaaggcaaaatgccttctacaactgccaagattcaatcttgatt
tatcatttacatctagttctctttaatccctactaatgatcgttcataaa
aaaattgaaaacattagctatatatgcaattgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126965835_126966944
seq2: B6Ng01-254H02.b_42_1155 (reverse)

seq1  GCAAATATGGAAGTGAATGCTCA-CAGTCATCTATTAGACGGAGC-ACAG  48
      |||||||| |||||||||||||| ||||||| |  ||||| |||| ||||
seq2  GCAAATAT-GAAGTGAATGCTCACCAGTCAT-TCATAGACCGAGCAACAG  48

seq1  GGCCCCCAATGGAGGAGCTA--GAGGAAGT-ACCCAAAGAGCTGAAGGGC  95
      | |||| ||||  |||||||   || |||| ||||||||||||||| |||
seq2  GCCCCCAAATGAGGGAGCTAAGAAGAAAGTAACCCAAAGAGCTGAA-GGC  97

seq1  TCTGCAATCCTATAGGTGGAACAACAATATGAACTAATCAGTACCTCCTC  145
      ||||||||||||||||||||  ||||||||| ||||||||||||||||||
seq2  TCTGCAATCCTATAGGTGGACAAACAATATG-ACTAATCAGTACCTCCTC  146

seq1  CCCCAGAGCTTGTGTCTATAGCTGCATATGATGGCCTAGTCGGCCATCAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGCTTGTGTCTATAGCTGCATATGATGGCCTAGTCGGCCATCAT  196

seq1  TGGGAAGAGAGGCCCCTTGGTCTTGC-AAACTTT-ATATGCCCCAGTACA  243
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  TGGGAAGAGAGGCCCCTTGGTCTTGCAAAACTTTAATATGCCCCAGTACA  246

seq1  GGGGAATGCCAGGGCCAAG-AAGTGGGAGTGGGTGGGTAGGGGAGCAGGG  292
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGGAATGCCAGGGCCAAGAAAGTGGGAGTGGGTGGGTAGGGGAGCAGGG  296

seq1  CGGGGCGAGGGT-ATAGAGGACTTTTGGGATAGCATTTAAAATGTAAATG  341
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGGGGCGAGGGTAATAGAGGACTTTTGGGATAGCATTTAAAATGTAAATG  346

seq1  GAGAAAATATCTAATAAAAAATTTTCTAAAAATGTTGTATGACGGCTAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATATCTAATAAAAAATTTTCTAAAAATGTTGTATGACGGCTAAT  396

seq1  GAGGCAGCTGGGCAGGTACAGGGGCTTACTACCAAGCCTGATGACTTGAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCTGGGCAGGTACAGGGGCTTACTACCAAGCCTGATGACTTGAG  446

seq1  CTGGATTCCCATCCACACTGACCCACATGGTAGAGCAAGGTGATGCCTGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTCCCATCCACACTGACCCACATGGTAGAGCAAGGTGATGCCTGC  496

seq1  AAGCTGACCCTCACATGTGCACACACATATATATATATAATAAATGCAAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACCCTCACATGTGCACACACATATATATATATAATAAATGCAAT  546

seq1  GACAATGTAATAATAGTTATTGCTGTATATTATTTTGCAATATGGTAATA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTAATAATAGTTATTGCTGTATATTATTTTGCAATATGGTAATA  596

seq1  GTTGTTTATTATTTTGAAAACCTTAATGGATTTTAACAGCAATGTATTTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTATTATTTTGAAAACCTTAATGGATTTTAACAGCAATGTATTTA  646

seq1  CTCAATAGTTAACTGTCCAACAAACCCATCTAGTCATTTTTCCTAAGAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAGTTAACTGTCCAACAAACCCATCTAGTCATTTTTCCTAAGAGT  696

seq1  GAAACCAACCATTTTGGATAATTCATTCCAAAGATATTTCTCATTCCAAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAACCATTTTGGATAATTCATTCCAAAGATATTTCTCATTCCAAG  746

seq1  CATATAGATTTGGCGCTATGCACAAGTTCTTGGTTCTCGAGAAAAAAATC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGATTTGGCGCTATGCACAAGTTCTTGGTTCTCGAGAAAAAAATC  796

seq1  AAAAGATATAGGTATATCCATAACAAATTATCTTCTGTTACCACTGATGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATATAGGTATATCCATAACAAATTATCTTCTGTTACCACTGATGC  846

seq1  AGAAAATGCAAAAAAAAAAAAAAAAAACCATATAAAATCTGCACCTCTGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGCAAAAAAAAAAAAAAAAAACCATATAAAATCTGCACCTCTGT  896

seq1  TAGGATGTCTTTTGAGAACGTTATGTGCTTTGGAGGAGTTGACGGAAAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGTCTTTTGAGAACGTTATGTGCTTTGGAGGAGTTGACGGAAAGT  946

seq1  TCTTTTCAAAGATAATGGCTATTTTTTTTTTTAAATTCAGCCCAGTACAA  991
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTTTTCAAAGATAATGGCTA-TTTTTTTTTTAAATTCAGCCCAGTACAA  995

seq1  AAATTCCCTAAGAATAAACAAGCAAATGAATACATGCATACACACAAATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCCTAAGAATAAACAAGCAAATGAATACATGCATACACACAAATG  1045

seq1  ATTATTAATCACAGAAAACTAATGAAGCCCCCTTAGAAAGCAAATGCTGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATCACAGAAAACTAATGAAGCCCCCTTAGAAAGCAAATGCTGT  1095

seq1  GTAGTATGTCAATGAATTC  1110
      |||||||||||||||||||
seq2  GTAGTATGTCAATGAATTC  1114

seq1: chr1_126843197_126844283
seq2: B6Ng01-254H02.g_68_1153

seq1  GAATTCCTGGAATTACATGATGAAGTTATGATTGCTCTTTCAAATTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAATTACATGATGAAGTTATGATTGCTCTTTCAAATTTTGT  50

seq1  GTCCTGGAGTTCATTTATTCATTAATAGATATTTCTGCATGACTGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAGTTCATTTATTCATTAATAGATATTTCTGCATGACTGCTGAG  100

seq1  AGTATTGGTGGATATACATTTATCATTTATATTATTTACATGTTAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGGTGGATATACATTTATCATTTATATTATTTACATGTTAGAATG  150

seq1  GGAGCTAGGTATGTGGACTTCTTCATTAGTTCTGTGTCTGGTATGGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAGGTATGTGGACTTCTTCATTAGTTCTGTGTCTGGTATGGACAG  200

seq1  AGCAGGTTGGGGCACCAGACAGTCTGTACATGCTGGGTTGAGTGTAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTTGGGGCACCAGACAGTCTGTACATGCTGGGTTGAGTGTAAGGA  250

seq1  TTGGATATGGCTCAGTTGTATTGAAGTCAGGGGGACATAGAGAACTTCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATGGCTCAGTTGTATTGAAGTCAGGGGGACATAGAGAACTTCGC  300

seq1  TGGTGAGCAGGATATTTATCCTGGATCAAGCCTAGAGTATGGGGTAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCAGGATATTTATCCTGGATCAAGCCTAGAGTATGGGGTAGATC  350

seq1  TTAGTGTTGGGGAAGATATATGCTGAATCAGGAATTCTGATCTCGCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTGGGGAAGATATATGCTGAATCAGGAATTCTGATCTCGCTAGA  400

seq1  CAAGGAGAATGATGTGCAGGATCTGGTAGGGTAGAAAGGTTAGATGTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAATGATGTGCAGGATCTGGTAGGGTAGAAAGGTTAGATGTAGC  450

seq1  ATGGGTAAGGTCTGTCAATCATGGGCAGGCAAGGCATGTCCTGTCAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAAGGTCTGTCAATCATGGGCAGGCAAGGCATGTCCTGTCAGAAG  500

seq1  CCTAGAGGTTGGTCGGGATGCAGGTAGTGGTGGCCAGAGTAGGCCAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGGTTGGTCGGGATGCAGGTAGTGGTGGCCAGAGTAGGCCAGGGC  550

seq1  ATTGGATGTGAGATGTAGTCTGGATCTCAGGAGGGTGCTTGGAAAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATGTGAGATGTAGTCTGGATCTCAGGAGGGTGCTTGGAAAGAAGA  600

seq1  CTTGGAATGACTCATCTAACTAGACCCTAGACAAGGACATCCACAGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATGACTCATCTAACTAGACCCTAGACAAGGACATCCACAGGCTG  650

seq1  ATTTTTAAAGCAGGTCACGTGAGTGGCTAAAACAACCTGAAAAGAGGAC-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTTTAAAGCAGGTCACGTGAGTGGCTAAAACAACCTGAAAAGAGGACT  700

seq1  TTTTGTTATTCTCTCACTAGAG-AAGAAGCAGAT-AATTAGTCTTTTATT  747
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTTTGTTATTCTCTCACTAGAGAAAGAAGCAGATAAATTAGTCTTTTATT  750

seq1  GTTATTCTCTCATATGTTACCCCCTGACCATAGTTTCCCTTTTCTTAATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTCTCATATGTTACCCCCTGACCATAGTTTCCCTTTTCTTAATT  800

seq1  CTTCCCAGTCCTCCTCCTCACTTTCCTTCTCCACCAGATTTACTCTTCCT  847
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTCCCAGTCCTCCTCCTCACTTTCC-TCTCCACCAGATTTACTCTTCCT  849

seq1  CCACTTCTCCATTTCCC-TTTAAAAAAAAATAGGCCATTCAGTAATATTA  896
      ||||||||||||||||| ||||||||||| ||||||||||||| ||||||
seq2  CCACTTCTCCATTTCCCTTTTAAAAAAAATTAGGCCATTCAGTTATATTA  899

seq1  ATGGAACACAGTATACAAAATTACAATAAGA-TTAGACTCCCACA-TTAA  944
      |||| |||||||||||||| |  ||||| || ||||||||||||| ||| 
seq2  ATGGCACACAGTATACAAATTACCAATAGGATTTAGACTCCCACATTTAG  949

seq1  GACTGGACAAGGCAAAAATGCCTTCTACAACTGCAAAGA-TCAATCTTTG  993
      ||||||||||||| |||||||||||||||||||| |||| |||||| |||
seq2  GACTGGACAAGGC-AAAATGCCTTCTACAACTGCCAAGATTCAATC-TTG  997

seq1  AGTTATTCATTTACATCTATTTCTCTTATAT-CCTACTAATGAATCTGTT  1042
      | ||| ||||||||||||| |||||||  || |||||||||| ||| |||
seq2  ATTTA-TCATTTACATCTAGTTCTCTTTAATCCCTACTAATG-ATC-GTT  1044

seq1  CATAAAAAAATGAAAAACATAAGCTATATTATTGCAATTTGAGGT  1087
      |||||||||||  ||||||| ||||||||   ||||| |||||||
seq2  CATAAAAAAATTGAAAACATTAGCTATAT--ATGCAA-TTGAGGT  1086