BAC Information

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BAC

Clone NameB6Ng01-257A11
Chromosome1 (Build37)
Map Location 68,958,338 - 69,116,934
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A11.bB6Ng01-257A11.g
ACCGA062831GA062832
length771132
definitionB6Ng01-257A11.b B6Ng01-257A11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,116,175 - 69,116,934)(68,958,338 - 68,958,469)
sequence
gaattcttttatgtatttgaacattaagcatgagtttaaaatgcccaaca
ggatagttttgaactagactttcctgcttttgtagacaaaaacatttttc
agaggaaaaaagaagtaatgttcaaattccttgttctaatgtgttttata
cttcacaggttgtcctcatgttcatagacatctttaatcaggtggccttt
gtcaactgtaacatagctgagactctgtgagactctgtgagctgcagtac
atcacaggcaacatctagttttgtctccagatttcactcaagctccttct
ctgtctcctgtatcccttttaatagttctagttgtttccatctattccac
ggatcactttcacttcaacaaatctaagccatccttggatcccctcagtt
tcttacatcccagcttctgcctgggggatccacactgtcgatatgctttc
agaaactattggttctaactatgtattttctgctgttttcccacgttttt
cttgttagtaagttttggaagattttgcgatgtggaaatgtgatgtccct
tatagtcaggtaccatgttggtggcgttttggggaggataggtggaggaa
agatgtcactaggggtagccttttgatgtttctttttttttatttttttt
attagatattttctttatatacattttcaaatttcaaatggttatcccaa
aaagttcccctatacccctccccccgacccctgcttcccctaccctatcc
atttctactttcttggccctg

tcaggaggaacatgtacattataatctagaactaagtatttaaattcagt
cagaattaatgaagcatctgaattataagatgtcaattaatatatatata
tatgtgtgtgtgtgtgtgtgtgtgtgtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69116175_69116934
seq2: B6Ng01-257A11.b_45_815 (reverse)

seq1  CAGGGCCAAG-AAGTGGGAATGGGT-GGGTAGGGG-AGCA-GGGTCGGGG  46
      |||||||||| |||| | ||||| | ||||||||| |||| |||||||||
seq2  CAGGGCCAAGAAAGTAGAAATGGATAGGGTAGGGGAAGCAGGGGTCGGGG  50

seq1  G--AGGGTATA-GGGAAC-TTTTGGGATAA-CATTTGAAATTTG-AAATG  90
      |   ||||||| |||||| ||||||||||| ||||||||||||| |||||
seq2  GGAGGGGTATAGGGGAACTTTTTGGGATAACCATTTGAAATTTGAAAATG  100

seq1  TATATAAAGAAAATATCTAATAAAAAAAATAAAAAAAAAGAAACATC-AA  139
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATATAAAGAAAATATCTAATAAAAAAAATAAAAAAAAAGAAACATCAAA  150

seq1  AGGCTACCCCTAGTGACATCTTTCCTCCACCTATCCTCCCCAAAACGCCA  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACCCCTAGTGACATCTTTCCTCCACCTATCCTCCCCAAAACGCCA  200

seq1  CCAACATGGTACCTGACTATAAGGGACATCACATTTCCACATCGCAAAAT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATGGTACCTGACTATAAGGGACATCACATTTCCACATCGCAAAAT  250

seq1  CTTCCAAAACTTACTAACAAGAAAAACGTGGGAAAACAGCAGAAAATACA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAAACTTACTAACAAGAAAAACGTGGGAAAACAGCAGAAAATACA  300

seq1  TAGTTAGAACCAATAGTTTCTGAAAGCATATCGACAGTGTGGATCCCCCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAACCAATAGTTTCTGAAAGCATATCGACAGTGTGGATCCCCCA  350

seq1  GGCAGAAGCTGGGATGTAAGAAACTGAGGGGATCCAAGGATGGCTTAGAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGCTGGGATGTAAGAAACTGAGGGGATCCAAGGATGGCTTAGAT  400

seq1  TTGTTGAAGTGAAAGTGATCCGTGGAATAGATGGAAACAACTAGAACTAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGTGAAAGTGATCCGTGGAATAGATGGAAACAACTAGAACTAT  450

seq1  TAAAAGGGATACAGGAGACAGAGAAGGAGCTTGAGTGAAATCTGGAGACA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGATACAGGAGACAGAGAAGGAGCTTGAGTGAAATCTGGAGACA  500

seq1  AAACTAGATGTTGCCTGTGATGTACTGCAGCTCACAGAGTCTCACAGAGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGATGTTGCCTGTGATGTACTGCAGCTCACAGAGTCTCACAGAGT  550

seq1  CTCAGCTATGTTACAGTTGACAAAGGCCACCTGATTAAAGATGTCTATGA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTATGTTACAGTTGACAAAGGCCACCTGATTAAAGATGTCTATGA  600

seq1  ACATGAGGACAACCTGTGAAGTATAAAACACATTAGAACAAGGAATTTGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGACAACCTGTGAAGTATAAAACACATTAGAACAAGGAATTTGA  650

seq1  ACATTACTTCTTTTTTCCTCTGAAAAATGTTTTTGTCTACAAAAGCAGGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACTTCTTTTTTCCTCTGAAAAATGTTTTTGTCTACAAAAGCAGGA  700

seq1  AAGTCTAGTTCAAAACTATCCTGTTGGGCATTTTAAACTCATGCTTAATG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGTTCAAAACTATCCTGTTGGGCATTTTAAACTCATGCTTAATG  750

seq1  TTCAAATACATAAAAGAATTC  760
      |||||||||||||||||||||
seq2  TTCAAATACATAAAAGAATTC  771


seq1: chr1_68958338_68958469
seq2: B6Ng01-257A11.g_73_204

seq1  TCAGGAGGAACATGTACATTATAATCTAGAACTAAGTATTTAAATTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGAACATGTACATTATAATCTAGAACTAAGTATTTAAATTCAGT  50

seq1  CAGAATTAATGAAGCATCTGAATTATAAGATGTCAATTAATATATATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAATGAAGCATCTGAATTATAAGATGTCAATTAATATATATATA  100

seq1  TATGTGTGTGTGTGTGTGTGTGTGTGTATGTG  132
      ||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTGTGTGTGTGTGTGTGTATGTG  132


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