BAC Information

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BAC

Clone NameB6Ng01-257O10
Chromosome1 (Build37)
Map Location 75,872,890 - 75,873,697
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257O10.bB6Ng01-257O10.g
ACCGA063480GA063481
length807460
definitionB6Ng01-257O10.b B6Ng01-257O10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacgagttatttcaatgaaacactcacattttcaaccctatta
aattctttagagatcaagttatagttagtaatcatgtcagtggctaagtc
aatgctaaggttattgtttcaataggtattttgtataaatgaaacctaga
tcggtaaatttctattttagatacactgttgctttctgttgagacataag
gggatattgttttcgttctagaagggcccatgtcagtcactttccaccac
tctaaccttccataacaacctacaaggaggaagtgtttatttggcctcgt
ggttttcaagactcaagtccatagacagctactggtggaggggccgtggc
taagcaaagctgtcccctcacagctgctcagaaacaatgtagaagggaga
agaagggtccagagtcccaggagcccctcaaaggtaaccctcacccaaat
aacccagctccaatccactaggcctagtcatggttctgggaattgagcat
aagaccttgtgtatgctaggcatgcactctaccactgagctatatcctta
gcccctgtttttgtgtgatagggactcactatgtggcttatgctggccta
cacataggctgggtagacctcaaactctaagtcctcctacctcttcttcc
ctggagctgggattacagctatgaacccgactcctgactaggccacaccc
cttaaggttctacctgccagtcgtgtcaatataattaagatataaagtct
tcaatttacttaagacattatgaggtaggtgtgttgtgtgtgtgtgtgtg
tgttgtg
caagcccatgatcttgctcaaggacatttctaggactgttggaacactgg
cagaaggctttagccatgtcagaattcaattttaaaaaagcacttataat
aggaaaatactgaaagagaacacgtggatccatacactagactaacgcag
gaatggaaaattaatgtatgggtagggaatgctagactccaggaggagag
cttccttgaaactcttttgcctcatgagtgacttttaagcctttcgactt
gtccagctgacttgaccggagagcgtagcagtttcagagagtgaatccac
acccatcatggtgggagtatggcaacaggcaggcaggcttatagctgaga
tctttacatcttatctgaaacttgagtgagcaagtgagagaaagagatag
atagatagacagataagaagggagggaggaagagggggagaagaaaagag
aggggggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75872890_75873697
seq2: B6Ng01-257O10.b_46_852 (reverse)

seq1  CACACACACACACACACACACACACACACACCTACCTCATAATGTCTTAA  50
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACA-ACACACACACACACACACA-ACACACCTACCTCATAATGTCTTAA  48

seq1  GTAAATTGAAGACTTTATATCTT-ATTATATTGACACGACTGGCAGGTAG  99
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTAAATTGAAGACTTTATATCTTAATTATATTGACACGACTGGCAGGTAG  98

seq1  AACCTTAAGGGGTGTGGCCTAGTCAGGAGTCGGGTTCATAGCTGTAATCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAGGGGTGTGGCCTAGTCAGGAGTCGGGTTCATAGCTGTAATCC  148

seq1  CAGCTCCAGGGAAGAAGAGGTAGGAGGACTTAGAGTTTGAGGTCTACCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGGGAAGAAGAGGTAGGAGGACTTAGAGTTTGAGGTCTACCCA  198

seq1  GCCTATGTGTAGGCCAGCATAAGCCACATAGTGAGTCCCTATCACACAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGTGTAGGCCAGCATAAGCCACATAGTGAGTCCCTATCACACAAA  248

seq1  AACAGGGGCTAAGGATATAGCTCAGTGGTAGAGTGCATGCCTAGCATACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGGCTAAGGATATAGCTCAGTGGTAGAGTGCATGCCTAGCATACA  298

seq1  CAAGGTCTTATGCTCAATTCCCAGAACCATGACTAGGCCTAGTGGATTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTTATGCTCAATTCCCAGAACCATGACTAGGCCTAGTGGATTGG  348

seq1  AGCTGGGTTATTTGGGTGAGGGTTACCTTTGAGGGGCTCCTGGGACTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTTATTTGGGTGAGGGTTACCTTTGAGGGGCTCCTGGGACTCTG  398

seq1  GACCCTTCTTCTCCCTTCTACATTGTTTCTGAGCAGCTGTGAGGGGACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTCTTCTCCCTTCTACATTGTTTCTGAGCAGCTGTGAGGGGACAG  448

seq1  CTTTGCTTAGCCACGGCCCCTCCACCAGTAGCTGTCTATGGACTTGAGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTAGCCACGGCCCCTCCACCAGTAGCTGTCTATGGACTTGAGTC  498

seq1  TTGAAAACCACGAGGCCAAATAAACACTTCCTCCTTGTAGGTTGTTATGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACCACGAGGCCAAATAAACACTTCCTCCTTGTAGGTTGTTATGG  548

seq1  AAGGTTAGAGTGGTGGAAAGTGACTGACATGGGCCCTTCTAGAACGAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGAGTGGTGGAAAGTGACTGACATGGGCCCTTCTAGAACGAAAA  598

seq1  CAATATCCCCTTATGTCTCAACAGAAAGCAACAGTGTATCTAAAATAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCCCCTTATGTCTCAACAGAAAGCAACAGTGTATCTAAAATAGAA  648

seq1  ATTTACCGATCTAGGTTTCATTTATACAAAATACCTATTGAAACAATAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCGATCTAGGTTTCATTTATACAAAATACCTATTGAAACAATAAC  698

seq1  CTTAGCATTGACTTAGCCACTGACATGATTACTAACTATAACTTGATCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATTGACTTAGCCACTGACATGATTACTAACTATAACTTGATCTC  748

seq1  TAAAGAATTTAATAGGGTTGAAAATGTGAGTGTTTCATTGAAATAACTCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTTAATAGGGTTGAAAATGTGAGTGTTTCATTGAAATAACTCG  798

seq1  TAAGAATTC  808
      |||||||||
seq2  TAAGAATTC  807