BAC Information

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BAC

Clone NameB6Ng01-258F02
Chromosome1 (Build37)
Map Location 110,602,785 - 110,603,974
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435640
Downstream geneEG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258F02.bB6Ng01-258F02.g
ACCGA063788GA063789
length1,1871,157
definitionB6Ng01-258F02.b B6Ng01-258F02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattctgaacatccatgccccaaatgtaagtgtaccaacatt
tgttaaataaattttactaaattggtaatgctcaaaacacacattgaaac
tcaaacaataatagtgaggaacttcaatacacaactctcaccactggact
agtcattgaaacagcaaattaagataaaaatggttcaactaacagaagtt
atgaactgaatggatttaacagacatctaccaaacatgtcaccccaaaac
aaaagattatagcttgttttcagcaactcatggaaccttctccaaaacta
accatttaattggaaaaacaaaaaacaaaaacaaaccaccaccaccacca
ccaacaacaacaacaaaaaaacaagtctcaacaaatacaagaagattgaa
ataatctgatgcattctatcataacatcatggattaaggctaaagttcag
taacaacaacaacaacaatcagaaagcccatagaaactgaacaacaatct
actcaatgataactttgtcagaaaagaaacaaagaaagaacttaaagata
ttccagaattcaatgaaaatgatagcatatcaaatttatggaacgcaatg
aaaacaatattaagacaaaaatccatagcactaagtaccttcatgaagaa
attggagagattctatattaacaatttaacagcatagctaaaagctctag
aacaaatagaagcaaacacaaccaagaagaaaaaaaatcatcagatctta
ttacaaaagcctatatttaatgaaactagaagatctagttgaaatgaaca
attttgtagactgatactacttactaaagttaaatcaaaatcagggaaac
tatctcaatagtcccatatgttcgaggaaatagaagcatttatttaaaaa
atgatcaaccaaaataaggccaaggccagatggcttttgtgtataattcg
atcagacctttcaaagaatggctaataccaatatgccccaactactctaa
aacaaagaaaaagaaaagaaaagaaaaggaaacagagggaacacacctac
tcattctatgagctaggatgcaacaaagagaacttagacattttgcttat
gatattagtgcaaaaaatatttcagtaatccagaaataagtcatcatgaa
caaccaaacttcaaaggagtgtgaattccaaatcaca
gaattccagatttccaggtcaccctctgttgcataaagagttcaagctta
gtcttatttacatgaaactgtctctaatagaaaggagctacacacatttt
tttttaaataaatgagttattaacagattttaagaactatgtgattagaa
atattagcaaccttggacaaaagactagaaaacagttaaagaaaataaac
tcatctcatttttttaaaattaatatgctagtgctgcaactaatgatgat
ttgaaaaaaaaaaactttcctccagaaaaattgaaggtactctcatttgt
ctcccactgaattattattaactgctatcattcataaacagtttagctta
tggtctaatttatctcaattagcttgttagttactttaatagatggatgc
attaattttaattgggtaatgactgaattggctaggtatcaacccaaatt
gttttacttagtgaaataagttcaatggcatcagatcaagataattcatt
tttaatttaaactcatttttatttggtataagatataatttaaacttctt
ttaaaaataagtctaaatcgggtcatggatttcaattatggtattaaaat
tcaagtagaaagagttttataatctaaaaaaaaatcagaaaaaatgtaat
tggaaaatagctcaataaatcattaataagatatgtttagatatatccca
ggaattatgctctgtcctctgatgattaggtctaagaacaagaaacattt
aaatgctttatgtttatacttgcaaaataaaaattgtatttcaaccttct
gaaacttttggatggattacctgagtattaataatagctagtaagtcact
tgtctgacaggaagatttagtaaaaatcagtaattattttcatcatcttt
attatcataattatcgactgtgaagttcagtttggtaaaagagaatgaat
gcaaaattttaactatactatgtaacattaaaagtctttactttcatact
gtttcttcgtttgttgttgtttgtttgttgttgtcgttttttcagcaggt
ttctctgtgtagcctgactgtctgcaaatcactttgtagagctgcctctg
ctccgaggtgctggtattatgcgtgccaacatgccagcttcaaaccgtat
ttcttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110602785_110603974
seq2: B6Ng01-258F02.g_67_1223 (reverse)

seq1  TTAAGAAATA-AGTATGAAGCTGGGCATGGTGGCGCACGCATTTAATCCC  49
      ||||||||||  || ||||||| |||||| ||  |||||||  |||| ||
seq2  TTAAGAAATACGGTTTGAAGCT-GGCATGTTG--GCACGCA--TAATACC  45

seq1  AGCACTTGGGAGGCAGAGGCAGGCTTCTACAAAGTGATTTCCAGGACAGT  99
      ||||| | ||| ||||||||||   ||||||||||||||| || ||||||
seq2  AGCACCTCGGA-GCAGAGGCAG--CTCTACAAAGTGATTTGCA-GACAGT  91

seq1  CAGGGCTACACAGAGAAACCCTGCCTTGAAAAAAAACGAAACAAAACAAA  149
      || ||||||||||||||| |||||  ||  ||||||||| | | ||||||
seq2  CA-GGCTACACAGAGAAA-CCTGC--TG--AAAAAACGACA-ACAACAAA  134

seq1  ACAAAACAAAAACAAAACAAAACAAAACAAAAAGAAACAAGTATGAAAGT  199
         |||||| |||||             |  ||||||| |||||||||||
seq2  --CAAACAACAACAA-------------ACGAAGAAAC-AGTATGAAAGT  168

seq1  AAAGAACTTTTAATGTTACATAGTATAGTTAAAATTTTGCATTCATTCTC  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAG-ACTTTTAATGTTACATAGTATAGTTAAAATTTTGCATTCATTCTC  217

seq1  TTTTTACCAAACTGAACTTCACAGTCGATAATTATGATAATAAAGATGAT  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTACCAAACTGAACTTCACAGTCGATAATTATGATAATAAAGATGAT  266

seq1  GAAAATAATTACTGATTTTTACTAAATCTTCCTGTCAGACAAGTGACTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATTACTGATTTTTACTAAATCTTCCTGTCAGACAAGTGACTTA  316

seq1  CTAGCTATTATTAATACTCAGGTAATCCATCCAAAAGTTTCAGAAGGTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTATTATTAATACTCAGGTAATCCATCCAAAAGTTTCAGAAGGTTG  366

seq1  AAATACAATTTTTATTTTGCAAGTATAAACATAAAGCATTTAAATGTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATTTTTATTTTGCAAGTATAAACATAAAGCATTTAAATGTTTC  416

seq1  TTGTTCTTAGACCTAATCATCAGAGGACAGAGCATAATTCCTGGGATATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAGACCTAATCATCAGAGGACAGAGCATAATTCCTGGGATATA  466

seq1  TCTAAACATATCTTATTAATGATTTATTGAGCTATTTTCCAATTACATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACATATCTTATTAATGATTTATTGAGCTATTTTCCAATTACATTT  516

seq1  TTTCTGATTTTTTTTTAGATTATAAAACTCTTTCTACTTGAATTTTAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTTTTTTTAGATTATAAAACTCTTTCTACTTGAATTTTAATA  566

seq1  CCATAATTGAAATCCATGACCCGATTTAGACTTATTTTTAAAAGAAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTGAAATCCATGACCCGATTTAGACTTATTTTTAAAAGAAGTTT  616

seq1  AAATTATATCTTATACCAAATAAAAATGAGTTTAAATTAAAAATGAATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATCTTATACCAAATAAAAATGAGTTTAAATTAAAAATGAATTA  666

seq1  TCTTGATCTGATGCCATTGAACTTATTTCACTAAGTAAAACAATTTGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATCTGATGCCATTGAACTTATTTCACTAAGTAAAACAATTTGGGT  716

seq1  TGATACCTAGCCAATTCAGTCATTACCCAATTAAAATTAATGCATCCATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCTAGCCAATTCAGTCATTACCCAATTAAAATTAATGCATCCATC  766

seq1  TATTAAAGTAACTAACAAGCTAATTGAGATAAATTAGACCATAAGCTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGTAACTAACAAGCTAATTGAGATAAATTAGACCATAAGCTAAA  816

seq1  CTGTTTATGAATGATAGCAGTTAATAATAATTCAGTGGGAGACAAATGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATGAATGATAGCAGTTAATAATAATTCAGTGGGAGACAAATGAG  866

seq1  AGTACCTTCAATTTTTCTGGAGGAAAGTTTTTTTTTTTCAAATCATCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTCAATTTTTCTGGAGGAAAGTTTTTTTTTTTCAAATCATCATT  916

seq1  AGTTGCAGCACTAGCATATTAATTTTAAAAAAATGAGATGAGTTTATTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGCACTAGCATATTAATTTTAAAAAAATGAGATGAGTTTATTTT  966

seq1  CTTTAACTGTTTTCTAGTCTTTTGTCCAAGGTTGCTAATATTTCTAATCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACTGTTTTCTAGTCTTTTGTCCAAGGTTGCTAATATTTCTAATCA  1016

seq1  CATAGTTCTTAAAATCTGTTAATAACTCATTTATTTAAAAAAAAATGTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTCTTAAAATCTGTTAATAACTCATTTATTTAAAAAAAAATGTGT  1066

seq1  GTAGCTCCTTTCTATTAGAGACAGTTTCATGTAAATAAGACTAAGCTTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCCTTTCTATTAGAGACAGTTTCATGTAAATAAGACTAAGCTTGA  1116

seq1  ACTCTTTATGCAACAGAGGGTGACCTGGAAATCTGGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTATGCAACAGAGGGTGACCTGGAAATCTGGAATTC  1157