BAC Information

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BAC

Clone NameB6Ng01-261I07
Chromosome1 (Build37)
Map Location 48,212,443 - 48,213,615
singlet/doubletsinglet
Overlap genenone
Upstream geneEG227061, LOC666869
Downstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261I07.bB6Ng01-261I07.g
ACCGA066167GA066168
length1,1491,164
definitionB6Ng01-261I07.b B6Ng01-261I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccagagctaaagggatcttcaccctata
gtgacacattatgactaccagtacccctgagctctgactcttagctgcat
atgtatcaaagatggctagtccgcatcactgcaaagagaggtccattgac
ccgcgaactttggtgtgcccgttacaggaccgccaggcaagggggaaat

gaattccaggacagccggggatacacagagaaatcctgtcttgaaaaacc
aaaaccaatcaaacaaacaaacaaaaaaacaaacacaaaaccaaaaacaa
aaaaacaaaacaaaaaacaaaggaaagcaaagcaaaacaaaacaaaaaaa
ctaaaagaggtaaaataaaggtgtcagtaagttctctggaagtccaacat
attctcaaactctgaaaacttttataagagctatgccctggaaaagcata
acttataatcttatgattttcaaaataaaatgcaaaaggagtcatatagt
acattactctacagtcattcagtattgatttattcattattgttatgtgg
atcatgacattagttcaagaattttgctttgtgaaatctaggcacctgca
tttaattccagtactttggaggcagaggcaagcagatcaccatgaattca
aggatagcctggtctacaaattgagttccagaatatccagtgctattaca
cagagaaaatgaagaaaaagagaaagaaaaggaaataggggctagggaca
gaaaagttattttctttggggagaactttgcctagtttctatcatctgcc
tctctcagctttcacacaaaacccctttgtttcttttgcaaacccttgtg
agattttatgttgtttgacagctcatgtttctgtggcaggggctcaaata
cagagttaaatgttttaaaacatactttaattatgttttctttgatgttt
ctaatttccttaagacctatgacccaccactggtagggggaaagaaaggt
taataggaaacaggggttgtggacctgtttagaagcagatgctggcaagg
atgtggagaaagaggaacactcctccattgttgatgggattgcaagcttg
tacaaccactctggaaatcagtctagcagttcctcagaaaattggacatg
gtactactggaggatctcgcaatacctctctgggcatatatccagtagat
gtccaccgataggaagactcatgcttccactatgttctagcagccttatt
tataatagccagaagctgcaagaacccagatgcccctcacagaagtatga
tacagaaaaatatggtacatttaccaatgaagtactactccagctattaa
ggaatgaattatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48212443_48213615
seq2: B6Ng01-261I07.g_64_1227

seq1  GAATTCCAGGACAGCCGGGGATACACAGAGAAATCCTGTCTTGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCGGGGATACACAGAGAAATCCTGTCTTGAAAAACC  50

seq1  AAAACCAATCAAACAAACAAACAAAAAAACAAACACAAAACCAAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAATCAAACAAACAAACAAAAAAACAAACACAAAACCAAAAACAA  100

seq1  AAAAACAAAACAAAAAACAAAGGAAAGCAAAGCAAAACAAAACAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAACAAAAAACAAAGGAAAGCAAAGCAAAACAAAACAAAAAAA  150

seq1  CTAAAAGAGGTAAAATAAAGGTGTCAGTAAGTTCTCTGGAAGTCCAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGAGGTAAAATAAAGGTGTCAGTAAGTTCTCTGGAAGTCCAACAT  200

seq1  ATTCTCAAACTCTGAAAACTTTTATAAGAGCTATGCCCTGGAAAAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAACTCTGAAAACTTTTATAAGAGCTATGCCCTGGAAAAGCATA  250

seq1  ACTTATAATCTTATGATTTTCAAAATAAAATGCAAAAGGAGTCATATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAATCTTATGATTTTCAAAATAAAATGCAAAAGGAGTCATATAGT  300

seq1  ACATTACTCTACAGTCATTCAGTATTGATTTATTCATTATTGTTATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACTCTACAGTCATTCAGTATTGATTTATTCATTATTGTTATGTGG  350

seq1  ATCATGACATTAGTTCAAGAATTTTGCTTTGTGAAATCTAGGCACCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACATTAGTTCAAGAATTTTGCTTTGTGAAATCTAGGCACCTGCA  400

seq1  TTTAATTCCAGTACTTTGGAGGCAGAGGCAAGCAGATCACCATGAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCCAGTACTTTGGAGGCAGAGGCAAGCAGATCACCATGAATTCA  450

seq1  AGGATAGCCTGGTCTACAAATTGAGTTCCAGAATATCCAGTGCTATTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCCTGGTCTACAAATTGAGTTCCAGAATATCCAGTGCTATTACA  500

seq1  CAGAGAAAATGAAGAAAAAGAGAAAGAAAAGGAAATAGGGGCTAGGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAATGAAGAAAAAGAGAAAGAAAAGGAAATAGGGGCTAGGGACA  550

seq1  GAAAAGTTATTTTCTTTGGGGAGAACTTTGCCTAGTTTCTATCATCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTATTTTCTTTGGGGAGAACTTTGCCTAGTTTCTATCATCTGCC  600

seq1  TCTCTCAGCTTTCACACAAAACCCCTTTGTTTCTTTTGCAAACCCTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGCTTTCACACAAAACCCCTTTGTTTCTTTTGCAAACCCTTGTG  650

seq1  AGATTTTATGTTGTTTGACAGCTCATGTTTCTGTGGCAGGGGCTCAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATGTTGTTTGACAGCTCATGTTTCTGTGGCAGGGGCTCAAATA  700

seq1  CAGAGTTAAATGTTTTAAAACATACTTTAATTATGTTTTCTTTGATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTAAATGTTTTAAAACATACTTTAATTATGTTTTCTTTGATGTTT  750

seq1  CTAATTTCCTTAAGACCTATGACCCACCACTGGTAGGGGGAAAGAAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCCTTAAGACCTATGACCCACCACTGGTAGGGGGAAAGAAAGGT  800

seq1  TAATAGGAAACAGGGGTTGTGGACCTGTTTAGAAGCAGATGCTGGCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGAAACAGGGGTTGTGGACCTGTTTAGAAGCAGATGCTGGCAAGG  850

seq1  ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGATGGGATTGCAAGCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGATGGGATTGCAAGCTTG  900

seq1  TACAACCACTCTGGAAATCAGTCTAGCAGTTCCTCAGAAAATTGGACATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCACTCTGGAAATCAGTCTAGCAGTTCCTCAGAAAATTGGACATG  950

seq1  GTACTACTGGAGGATCTCGCAATACCTCTCCTGGGCATATATCCAGTAGA  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTACTACTGGAGGATCTCGCAATACCTCT-CTGGGCATATATCCAGTAGA  999

seq1  TGTTCCAACCGATAAGAAGGACTCATGC-TCCACTATGTTCTTAGCAGCC  1049
      |||  | ||||||| ||| ||||||||| |||||||||||| ||||||||
seq2  TGT--CCACCGATAGGAA-GACTCATGCTTCCACTATGTTC-TAGCAGCC  1045

seq1  TTATTTATAATAGCCAGAAGCTGCAAAGAACCCAGATGCCCCTCAACAGA  1099
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  TTATTTATAATAGCCAGAAGCTGC-AAGAACCCAGATGCCCCTC-ACAGA  1093

seq1  GTAATGGATACAG-AAAATATGGTACATTTACACAATGGAGTACTACT-C  1147
         || ||||||| |||||||||||||||||| ||||| ||||||||| |
seq2  AGTAT-GATACAGAAAAATATGGTACATTTAC-CAATGAAGTACTACTCC  1141

seq1  AGCTATTAAAAGGAATGAATTTATGA  1173
      |||||||  |||||||||| ||||||
seq2  AGCTATT--AAGGAATGAA-TTATGA  1164


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