BAC Information

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BAC

Clone NameB6Ng01-265B18
Chromosome1 (Build37)
Map Location 11,900,622 - 11,901,136
singlet/doubletsinglet
Overlap geneA830018L16Rik
Upstream geneC030045D06Rik
Downstream geneLOC665262, LOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265B18.bB6Ng01-265B18.g
ACCGA068846GA068847
length1,1901,090
definitionB6Ng01-265B18.b B6Ng01-265B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctcattctccaccatcatgtctgcttgtatatactgttat
gcttcctgaaactgtaagccagccccaattaaatgtttgccttttacaaa
aaagttgccttggtcatgttgtctcttcatagcaatggaaaccctaattt
aggcaccatacacccaataatgctattctatgaatatggggactattttc
atcaaagcaccatacagggaccaccatcccatgggtagctccacccatca
tccatcttatgtctgtcttatgaaagcattttctcaactggaatcaggtc
tagcctggatcaagttggcataaaattagcttgcttaatgcatgatattt
tttttaactttttattggttctttgtaaatttcacatcacatactcttgc
tcatcaacctctcccctcttatctgccacaaccctggcaatcccaggtat
aagaactttgttttctgaaaatcaatagtggaaccttactgagactcata
tcaagtatcttcttgttgccctgtgtcttggagatcctgtagctttgaat
ctgtagttctgaccccttcatgcactccagcattttatcagtggggtaga
tgttgtggtgggccaactccatgaatttgagactgaggaatctgagctgg
tcagctctcccattttcgcattctcatggctggcttactggcaatccctg
catcaagagtcatttctacccttctgcctaggtgaagtggatgacctact
cttttgtgtattacagcaggtgaggggtagggacacctctccagcatgct
tcaggttgctagggcaaaagtgagggaagaggatctcttcctagtaaatg
tcacactagacagcagacaaagggtcagctctcccacactcatgtcttca
ggccattcctacctgcaaccctcacatccagggcccattctactgtgctg
ctaagataagatacagacacacagtattttctttttagacaatctttcct
gttttaattttgtaggttttgttctctcttttacctcttctcctctcttc
ctcccccataatctcagatataaaaatcataaatatgaggcatatacaca
attaaaaattcccaatagtcttacagttaaaacctaagtaagctccaggt
tgaaagtgcttccatgattaggaaaccgtggcgttctcta

gaattccacgcagtattgtgttttttgttgttgttggttttgtttttgtt
tttgtttttgtttttctactaaggaactcacttcacagtcagaagttcct
tcatagagatgttcaacagtgggcctatgattatggaatccactggtctt
actatgtctcctgtctccattatgctgaaacagttggcttgacagaaaga
tagaatggccttttgaagacaccatgtcagtgccaatgaagtggcaccag
ccttgaggtctaggatggagctctccaaagggcagttcaaggcttgagtc
agcatccaatatatggtacagtttatctcatcttcaggatgcatgggtcc
aagaatcctggacgaatgaagagggatgatagttccactcactatcactc
ttagttacccactaggataagttttgtcttctcttcttgtaatctaaagt
tttactgtcctagaagttttagtttcagagtgggaaacacttttaccaag
agtctcaacaatcatggttctgaactggaagctcagacttccccctggcc
actgtgagcttgtcatgccattaaaccaacaggtaaagaaaggaatacta
tgttaggagtagtgattgatccagattttgaagggaaaattggattgttt
ctccacaatggaggtaagaaacatcatatttggagtccaggagatccttt
atgacatctcttggtgctattacatgctttgattaaagtcaataggaaat
gacaacaatcctactctaggctgtatgacaatgatcagagactcttcaag
aataaaggtatttcctttctaggaaaagaaccaagactgtctgaaatgct
ttgctgagggtggagtagatagagaatgggcagtaaggacaggtagttaa
taaatgcaagcttagggtccttgtgactaatttaccagacttaaggatat
aggacaaaagacctttactttcacagttttcttaatctcagggtttcttc
agcttgcctaaatggagatggcagcttcagaattgggttgttgaggactg
tgtagatgtggacatgtcttgcttatgtaatgaggtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11900622_11901136
seq2: B6Ng01-265B18.g_619_1157

seq1  CTGTGAGCTTGTCATGCCATTAAACCAACAGGTAAAGAAAGGAATACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCTTGTCATGCCATTAAACCAACAGGTAAAGAAAGGAATACTAT  50

seq1  GTTAGGAGTAGTGATTGATCCAGATTTTGAAGGGAAAATTGGATTGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAGTAGTGATTGATCCAGATTTTGAAGGGAAAATTGGATTGTTTC  100

seq1  TCCACAATGGAGGTAAGAAACATCATATTTGGAGTCCAGGAGATCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATGGAGGTAAGAAACATCATATTTGGAGTCCAGGAGATCCTTTA  150

seq1  TGACATCTCTTGGTGCTATTACATGCTTTGATTAAAGTCAATAGGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCTCTTGGTGCTATTACATGCTTTGATTAAAGTCAATAGGAAATG  200

seq1  ACAACAA-CCTACTCTAGGCTGTATGACAATGATCAGAGACTCTTCAAGA  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATCCTACTCTAGGCTGTATGACAATGATCAGAGACTCTTCAAGA  250

seq1  ATAAAGGTATTTCCTTTCTAGGAAAAGAACCAAGACTGTCTGAAATGC-T  298
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATAAAGGTATTTCCTTTCTAGGAAAAGAACCAAGACTGTCTGAAATGCTT  300

seq1  TGCTGAGGGTGGAGTAGATAGAGAATGGGCAGTAAGGACAGGTAGTT-AT  347
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCTGAGGGTGGAGTAGATAGAGAATGGGCAGTAAGGACAGGTAGTTAAT  350

seq1  AAATGCAAGC-TAGGG-CCTTGTGACTAATT--ACAGAC-TAAGGATATA  392
      |||||||||| ||||| ||||||||||||||   ||||| ||||||||||
seq2  AAATGCAAGCTTAGGGTCCTTGTGACTAATTTACCAGACTTAAGGATATA  400

seq1  -GAC-AAAGACC-TTAC-TTCACAG-TTTCTTAATCTCAGG--TTCTTCA  435
       ||| ||||||| |||| ||||||| |||||||||||||||  |||||||
seq2  GGACAAAAGACCTTTACTTTCACAGTTTTCTTAATCTCAGGGTTTCTTCA  450

seq1  GCT--GCTTAATGGAGATGGCAGC-TCAGAAT--GGTTG-TGAGGACTGT  479
      |||   || ||||||||||||||| |||||||  ||||| ||||||||||
seq2  GCTTGCCTAAATGGAGATGGCAGCTTCAGAATTGGGTTGTTGAGGACTGT  500

seq1  GTAGATGTGGACATGTC-TGC-TATGTAGTGA-GTGTGA  515
      ||||||||||||||||| ||| |||||| ||| ||||||
seq2  GTAGATGTGGACATGTCTTGCTTATGTAATGAGGTGTGA  539


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