BAC Information

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BAC

Clone NameB6Ng01-266P01
Chromosome1 (Build37)
Map Location 72,711,821 - 72,894,426
singlet/doubletdoublet
Overlap geneAnkar, Rpl37a, Igfbp2
Upstream geneGabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1
Downstream geneIgfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208, LOC100043291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266P01.bB6Ng01-266P01.g
ACCGA070207GA070208
length4661,112
definitionB6Ng01-266P01.b B6Ng01-266P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,893,955 - 72,894,426)(72,711,821 - 72,712,943)
sequence
caggacagccatggttacccagcaaaatctggtcccaaaaacaaaccaaa
aaaaaatctgggtgagtgcatagaggttttttcaacacattttgcagtcc
ctgtccccaaatgggatagttcttaatagatacgattcaaggcacatagt
tcccaatggacccctcagtacagaggagtccatacagtatagagggcacc
acgggtccccctcctaggcaatactacaagttggaaagagccagcagtga
ctgcaaaaggtaaggtatactaccttgtctaagttgttagaaaccagatg
gtgttcagctaagggaggaaggagtcagctcttccacaccaggtacagaa
ctgggtaccagtgttaacagctgcgcctgctgttgctaaggtgtcctagc
atctaaaagccatcagtagaagtttgtcctacaccttcccttcccttccc
ttcccttcccttacct
gaattccactctgaaaagaaacaaagagaattacatctgaatttgtttaa
gatggatacaattttgtttaaaagtctgtaagctttctgtaaatacatct
ttatttagaaaagaacaattgcttataaacaaaaatgactactgctgtca
cacagtaagttaagacaactgagtgattcttacctggaaaaatacgatat
tattgcaggactaagataaacacacacatatgcattatctgacacaataa
actggaaaggagtaacagcctaagggtactacatacacagagcacttatc
atagctttggctaattgccagaatcaattaacaagctaattaagtagata
aaactgaggcacttagagttggacttgggtgtgactatattttcaagtta
ttgtctaaggaaccgatatgaggcacagcaatgaaagtttttcaaagaag
tttaaaataatgaacaaaggcaaattaaaaaaaaaaaagagagagtacaa
agaaaacaagatagaagtggtttccaccatcaggaactcaaagtagagca
ttaagcctgatagaaagtgcattttataatgcagatggttcaattcatac
tgaagaagcaactctaggaaactgaagaaacaaatcaagtaacttcattt
ataaatatccaaagaaagatcttaaatactagtggatacaatggggtagg
ttttatttgatgaaatatagcatagcaacaattgtttggtgttcaacaaa
agcaatttttttttctaagtctttctggtacacagttggaatatatttct
cgcacagaactaatatcttcatttaaacaagaaacaaccagtataaacta
tgcaaagtactccatcttctcaccaggctactctaacttttgtcagtact
gagcatctaggccccctaagcccactacactacagacctgcactcaccta
aatgattgctgctggctgaaatgctttctctccccatcatccctagtagt
ttgtactgtgtacacatgtatctctatctttctattctgtgtggagaagt
tctgtcagtgtaaattggttctataaacagttactccacatatggccata
acattcttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72893955_72894426
seq2: B6Ng01-266P01.b_44_515 (reverse)

seq1  AGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGTGTAGGACAAACTTCTA  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGGGAAGGGAAGGGAAGGGAAGGGAAGGTGTAGGACAAACTTCTA  50

seq1  CTGATGGCTTTTAGATGCTAGGACACCTTAGCAACAGCAGGCGCAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGCTTTTAGATGCTAGGACACCTTAGCAACAGCAGGCGCAGCTGT  100

seq1  TAACACTGGTACCCAGTTCTGTACCTGGTGTGGAAGAGCTGACTCCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGGTACCCAGTTCTGTACCTGGTGTGGAAGAGCTGACTCCTTCC  150

seq1  TCCCTTAGCTGAACACCATCTGGTTTCTAACAACTTAGACAAGGTAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAGCTGAACACCATCTGGTTTCTAACAACTTAGACAAGGTAGTAT  200

seq1  ACCTTACCTTTTGCAGTCACTGCTGGCTCTTTCCAACTTGTAGTATTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACCTTTTGCAGTCACTGCTGGCTCTTTCCAACTTGTAGTATTGCC  250

seq1  TAGGAGGGGGACCCGTGGTGCCCTCTATACTGTATGGACTCCTCTGTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGGGGACCCGTGGTGCCCTCTATACTGTATGGACTCCTCTGTACT  300

seq1  GAGGGGTCCATTGGGAACTATGTGCCTTGAATCGTATCTATTAAGAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTCCATTGGGAACTATGTGCCTTGAATCGTATCTATTAAGAACTA  350

seq1  TCCCATTTGGGGACAGGGACTGCAAAATGTGTTGAAAAAACCTCTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTGGGGACAGGGACTGCAAAATGTGTTGAAAAAACCTCTATGCA  400

seq1  CTCACCCAGATTTTTTTTTGGTTTGTTTTTGGGACCAGATTTTGCTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCAGATTTTTTTTTGGTTTGTTTTTGGGACCAGATTTTGCTGGGT  450

seq1  AACCATGGCTGTCCTGGAATTC  472
      ||||||||||||||||||||||
seq2  AACCATGGCTGTCCTGGAATTC  472

seq1: chr1_72711821_72712943
seq2: B6Ng01-266P01.g_67_1178

seq1  GAATTCCACTCTGAAAAGAAACAAAGAGAATTACATCTGAATTTGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTGAAAAGAAACAAAGAGAATTACATCTGAATTTGTTTAA  50

seq1  GATGGATACAATTTTGTTTAAAAGTCTGTAAGCTTTCTGTAAATACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATACAATTTTGTTTAAAAGTCTGTAAGCTTTCTGTAAATACATCT  100

seq1  TTATTTAGAAAAGAACAATTGCTTATAAACAAAAATGACTACTGCTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGAAAAGAACAATTGCTTATAAACAAAAATGACTACTGCTGTCA  150

seq1  CACAGTAAGTTAAGACAACTGAGTGATTCTTACCTGGAAAAATACGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAGTTAAGACAACTGAGTGATTCTTACCTGGAAAAATACGATAT  200

seq1  TATTGCAGGACTAAGATAAACACACACATATGCATTATCTGACACAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGGACTAAGATAAACACACACATATGCATTATCTGACACAATAA  250

seq1  ACTGGAAAGGAGTAACAGCCTAAGGGTACTACATACACAGAGCACTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGGAGTAACAGCCTAAGGGTACTACATACACAGAGCACTTATC  300

seq1  ATAGCTTTGGCTAATTGCCAGAATCAATTAACAAGCTAATTAAGTAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTGGCTAATTGCCAGAATCAATTAACAAGCTAATTAAGTAGATA  350

seq1  AAACTGAGGCACTTAGAGTTGGACTTGGGTGTGACTATATTTTCAAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGGCACTTAGAGTTGGACTTGGGTGTGACTATATTTTCAAGTTA  400

seq1  TTGTCTAAGGAACCGATATGAGGCACAGCAATGAAAGTTTTTCAAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAAGGAACCGATATGAGGCACAGCAATGAAAGTTTTTCAAAGAAG  450

seq1  TTTAAAATAATGAACAAAGGCAAATTAAAAAAAAAAAAGAGAGAGTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATAATGAACAAAGGCAAATTAAAAAAAAAAAAGAGAGAGTACAA  500

seq1  AGAAAACAAGATAGAAGTGGTTTCCACCATCAGGAACTCAAAGTAGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAGATAGAAGTGGTTTCCACCATCAGGAACTCAAAGTAGAGCA  550

seq1  TTAAGCCTGATAGAAAGTGCATTTTATAATGCAGATGGTTCAATTCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTGATAGAAAGTGCATTTTATAATGCAGATGGTTCAATTCATAC  600

seq1  TGAAGAAGCAACTCTAGGAAACTGAAGAAACAAATCAAGTAACTTCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGCAACTCTAGGAAACTGAAGAAACAAATCAAGTAACTTCATTT  650

seq1  ATAAATATCCAAAGAAAGATCTTAAATACTAGTGGATACAATGGGGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATCCAAAGAAAGATCTTAAATACTAGTGGATACAATGGGGTAGG  700

seq1  TTTTATTTGATGAAATATAGCATAGCAACAATTGTTTGGTGTTCAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGATGAAATATAGCATAGCAACAATTGTTTGGTGTTCAACAAA  750

seq1  AGCAATTTTTTTTTCTAAGTCTTTCTGGTACACAGTTGGAATATATTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTTTTTTTCTAAGTCTTTCTGGTACACAGTTGGAATATATTTCT  800

seq1  CGCACAGAACTAATATCTTCATTTAAACAAGAAACAACCAGTATAAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAGAACTAATATCTTCATTTAAACAAGAAACAACCAGTATAAACTA  850

seq1  TGCAAAGTACTCCATCTTCTCACCAGGCTACTCTAAACTTTTGTCAGTAC  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGCAAAGTACTCCATCTTCTCACCAGGCTACTCT-AACTTTTGTCAGTAC  899

seq1  TGAGCATCTAGGCCCCCTAAGCCCACTACACTACAGACCTGCACTCACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATCTAGGCCCCCTAAGCCCACTACACTACAGACCTGCACTCACCT  949

seq1  AAATGATTGCTGCTGGCTGAAATGCTTTCTCTCCCCATCATCCCTAGTAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTGCTGCTGGCTGAAATGCTTTCTCTCCCCATCATCCCTAGTAG  999

seq1  TTTTGTTACTGTGTAACAACATGTATCTCTATCTTTCTAATTTCTGTGTG  1050
      |||   |||||||||   |||||||||||||||||||||  |||||||||
seq2  TTT--GTACTGTGTA--CACATGTATCTCTATCTTTCTA--TTCTGTGTG  1043

seq1  AGAAAGTTTCTGTCAGTGGAAAAATGGGTTCTATAAAACAG-TACTCACA  1099
       || |  |||||||||||   |||| |||||||| |||||| ||||| ||
seq2  -GAGAAGTTCTGTCAGTG--TAAATTGGTTCTAT-AAACAGTTACTC-CA  1088

seq1  TATTTGGCAATAACATCCTTGTTT  1123
       || |||| ||||||| |||||||
seq2  CATATGGCCATAACATTCTTGTTT  1112