BAC Information

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BAC

Clone NameB6Ng01-267E24
Chromosome1 (Build37)
Map Location 84,466,607 - 84,467,219
singlet/doubletsinglet
Overlap geneDner
Upstream gene5033414K04Rik, LOC100039638
Downstream geneTrip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267E24.g
ACCGA070472
length613
definitionB6Ng01-267E24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctttttgaaaatatagatttattttcagttatgaatatataca
ttgaagagtgagcaagtgtgagtgcagatgcccgaggaggccacaagagg
gcagcagatcctcagagctggaattgcaggcagttgtgagctgtccaaag
tgggtgttgagaaccaaacttgtgttttttgtaagagaagtacaagctct
aaaccaaagagccatctctcctacctctgaattctggttttaatttttat
ttctatttacctttctctagttccatattttaataatattacttgttctg
attataatagagactgtaaaagtagaagtagtcattcatttcatcaagga
agaaagtctggtgttttagccggtggctatgttactttccttcagtataa
ttttatgtttggttcagaacttggagatcctttaagttgaaactagatgc
attttaactctgaaggtttctgataatttatacatccttcccatgagaat
gtctcatatcttgtttagaacattgagatctttaaattataagcttcgtg
atttttttttttttggcatggaatagagtttatttagggcatgtggaggg
gagttgaggatgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84466607_84467219
seq2: B6Ng01-267E24.g_71_683 (reverse)

seq1  CCATCCTCAACTCCCCTCCACATGCCCTAAATAAACTCTATTCCATGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCAACTCCCCTCCACATGCCCTAAATAAACTCTATTCCATGCCA  50

seq1  AAAAAAAAAAAATCACGAAGCTTATAATTTAAAGATCTCAATGTTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAATCACGAAGCTTATAATTTAAAGATCTCAATGTTCTAAA  100

seq1  CAAGATATGAGACATTCTCATGGGAAGGATGTATAAATTATCAGAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATATGAGACATTCTCATGGGAAGGATGTATAAATTATCAGAAACCT  150

seq1  TCAGAGTTAAAATGCATCTAGTTTCAACTTAAAGGATCTCCAAGTTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTTAAAATGCATCTAGTTTCAACTTAAAGGATCTCCAAGTTCTGA  200

seq1  ACCAAACATAAAATTATACTGAAGGAAAGTAACATAGCCACCGGCTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACATAAAATTATACTGAAGGAAAGTAACATAGCCACCGGCTAAAA  250

seq1  CACCAGACTTTCTTCCTTGATGAAATGAATGACTACTTCTACTTTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGACTTTCTTCCTTGATGAAATGAATGACTACTTCTACTTTTACAG  300

seq1  TCTCTATTATAATCAGAACAAGTAATATTATTAAAATATGGAACTAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTATAATCAGAACAAGTAATATTATTAAAATATGGAACTAGAGA  350

seq1  AAGGTAAATAGAAATAAAAATTAAAACCAGAATTCAGAGGTAGGAGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAATAGAAATAAAAATTAAAACCAGAATTCAGAGGTAGGAGAGAT  400

seq1  GGCTCTTTGGTTTAGAGCTTGTACTTCTCTTACAAAAAACACAAGTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTGGTTTAGAGCTTGTACTTCTCTTACAAAAAACACAAGTTTGG  450

seq1  TTCTCAACACCCACTTTGGACAGCTCACAACTGCCTGCAATTCCAGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACACCCACTTTGGACAGCTCACAACTGCCTGCAATTCCAGCTCT  500

seq1  GAGGATCTGCTGCCCTCTTGTGGCCTCCTCGGGCATCTGCACTCACACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCTGCTGCCCTCTTGTGGCCTCCTCGGGCATCTGCACTCACACTT  550

seq1  GCTCACTCTTCAATGTATATATTCATAACTGAAAATAAATCTATATTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCTTCAATGTATATATTCATAACTGAAAATAAATCTATATTTTC  600

seq1  AAAAAGGGAATTC  613
      |||||||||||||
seq2  AAAAAGGGAATTC  613


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