BAC Information

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BAC

Clone NameB6Ng01-274O09
Chromosome1 (Build37)
Map Location 70,788,377 - 70,789,466
singlet/doubletsinglet
Overlap geneA830006F12Rik
Upstream geneSpag16
Downstream geneLOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274O09.bB6Ng01-274O09.g
ACCGA076080GA076081
length1,1871,083
definitionB6Ng01-274O09.b B6Ng01-274O09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacgtgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagatgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaaagtagccaaggagctaaaggatctgcaccctata
gtggaacacattatgagctaaccagtacccgagctctgactctagctgca
atattatatcaaagatgctagttcggcaatcactgtaagagagtcccatg
aactgcaaactttatatgcccaagtacaggaatcaggcaaaaggcatgtg
caggaattggggatatagcgcatagcatcgtgcatca
gaattctctgtaacaaaatctaaaagaaacagagctgagagcatttgagt
gtcacatgaatgtatacacatgcatgcatatatgaatatacacagcgaaa
gagatagagatagagatagaaataggtatgtttcctttattgttgtctat
tcaattacaagtcattgattgcatctttagtcccatatctttttcagaaa
atgcaacacattggctacatgaggcaaattgtttccttattcacaatttt
tcagggctgagttggtttcattttaaaattctcatcatcaagacatatac
aggtataccaaaggcacatcctcatccattgaaacacaaactgcacccta
agggttaacagtgggatagcccactgagggttagcagtgggttagcccac
tgagggttagcagtgggttagcccactgaaggttaactgtgattactttt
gcaaattttgatgtcttattttttatatatacatcagagctaatgagatg
gtccagaatgtaaggcacttgccaagcaactatgaggtcataagttcaat
tcctcagaacctatatcaaagctgggtgcattagcatgcatctctaatcc
tggaactcctaaagtgagataggtagtggagaccagaaaaattagggcaa
tgaggcgagcctgacatacaagagcaagagaccctgattcaaataaggta
gacgatgaagacaaagtcttgatgctgtcctctgacatccacacacgtgt
gcacatacacaaatgcaggcacattatatacaggtgtcatgcacacagag
gtatgaaaaataaaatatcaacaacaatgaataacttctctgaaactccc
cttatattcatttaatactgggctcccatgctccttctcctaagtatgac
agggaaaattagaattgttcagtcttactttaattttcctccagcattaa
aaataaacccatgctaaaatagcaactttgactgctgagatttagaaagc
ttcattaaggagaaaagggacatcatgaggatattcttttgtatggagct
ctaggacatcgcattacgctgggagagaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70788377_70789466
seq2: B6Ng01-274O09.g_67_1149

seq1  GAATTCTCTGTAACAAAATCTAAAAGAAACAGAGCTGAGAGCATTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAACAAAATCTAAAAGAAACAGAGCTGAGAGCATTTGAGT  50

seq1  GTCACATGAATGTATACACATGCATGCATATATGAATATACACAGCGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGAATGTATACACATGCATGCATATATGAATATACACAGCGAAA  100

seq1  GAGATAGAGATAGAGATAGAAATAGGTATGTTTCCTTTATTGTTGTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGAGATAGAGATAGAAATAGGTATGTTTCCTTTATTGTTGTCTAT  150

seq1  TCAATTACAAGTCATTGATTGCATCTTTAGTCCCATATCTTTTTCAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACAAGTCATTGATTGCATCTTTAGTCCCATATCTTTTTCAGAAA  200

seq1  ATGCAACACATTGGCTACATGAGGCAAATTGTTTCCTTATTCACAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACACATTGGCTACATGAGGCAAATTGTTTCCTTATTCACAATTTT  250

seq1  TCAGGGCTGAGTTGGTTTCATTTTAAAATTCTCATCATCAAGACATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCTGAGTTGGTTTCATTTTAAAATTCTCATCATCAAGACATATAC  300

seq1  AGGTATACCAAAGGCACATCCTCATCCATTGAAACACAAACTGCACCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACCAAAGGCACATCCTCATCCATTGAAACACAAACTGCACCCTA  350

seq1  AGGGTTAACAGTGGGATAGCCCACTGAGGGTTAGCAGTGGGTTAGCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAACAGTGGGATAGCCCACTGAGGGTTAGCAGTGGGTTAGCCCAC  400

seq1  TGAGGGTTAGCAGTGGGTTAGCCCACTGAAGGTTAACTGTGATTACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTAGCAGTGGGTTAGCCCACTGAAGGTTAACTGTGATTACTTTT  450

seq1  GCAAATTTTGATGTCTTATTTTTTATATATACATCAGAGCTAATGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTGATGTCTTATTTTTTATATATACATCAGAGCTAATGAGATG  500

seq1  GTCCAGAATGTAAGGCACTTGCCAAGCAACTATGAGGTCATAAGTTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAATGTAAGGCACTTGCCAAGCAACTATGAGGTCATAAGTTCAAT  550

seq1  TCCTCAGAACCTATATCAAAGCTGGGTGCATTAGCATGCATCTCTAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGAACCTATATCAAAGCTGGGTGCATTAGCATGCATCTCTAATCC  600

seq1  TGGAACTCCTAAAGTGAGATAGGTAGTGGAGACCAGAAAAATTAGGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCCTAAAGTGAGATAGGTAGTGGAGACCAGAAAAATTAGGGCAA  650

seq1  TGAGGCGAGCCTGACATACAAGAGCAAGAGACCCTGATTCAAATAAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCGAGCCTGACATACAAGAGCAAGAGACCCTGATTCAAATAAGGTA  700

seq1  GACGATGAAGACAAAGTCTTGATGCTGTCCTCTGACATCCACACACGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATGAAGACAAAGTCTTGATGCTGTCCTCTGACATCCACACACGTGT  750

seq1  GCACATACACAAATGCAGGCACATTATATACAGGTGTCATGCACACAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACACAAATGCAGGCACATTATATACAGGTGTCATGCACACAGAG  800

seq1  GTATGAAAAATAAAATATCAACAACAATGAATAACTTCTCTGAAACTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAAAATAAAATATCAACAACAATGAATAACTTCTCTGAAACTCCC  850

seq1  CTTATATTCATTTAATACT-GGCTCCCATGCTCCTTCTCCTAAGTATGAC  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTATATTCATTTAATACTGGGCTCCCATGCTCCTTCTCCTAAGTATGAC  900

seq1  AGGG-AAATTAGAATTGTTCAGTCTTACTTTAATTTTCCTCCAGCATTAA  948
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAATTAGAATTGTTCAGTCTTACTTTAATTTTCCTCCAGCATTAA  950

seq1  AAATAAACCCATGCTAAAATAGCAAACCTTTGACTGCTGAGATTTAGAAA  998
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  AAATAAACCCATGCTAAAATAGCAA--CTTTGACTGCTGAGATTTAGAAA  998

seq1  GCTTCATTAAGGAGAAAAGGGACAATCATGAGGAATATTCCTTTTGTTAA  1048
      ||||||||||||||||||||||| ||||||||| ||||| |||||||  |
seq2  GCTTCATTAAGGAGAAAAGGGAC-ATCATGAGG-ATATT-CTTTTGT--A  1043

seq1  TGAGCCTCTAGGACATCCGCATTAACGCTGGAAGAGAGGAAA  1090
      ||   ||||||||||| |||||| ||||||| ||||||||||
seq2  TGGAGCTCTAGGACAT-CGCATT-ACGCTGGGAGAGAGGAAA  1083