BAC Information

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BAC

Clone NameB6Ng01-275N20
Chromosome1 (Build37)
Map Location 108,586,971 - 108,762,789
singlet/doubletdoublet
Overlap geneBcl2, LOC100042085, Fvt1, Vps4b, Serpinb5
Upstream gene2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634, Phlpp, LOC626075
Downstream geneLOC671141, Serpinb12, Serpinb13, LOC666394, Serpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275N20.bB6Ng01-275N20.g
ACCGA076791GA076792
length9111,049
definitionB6Ng01-275N20.b B6Ng01-275N20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,761,883 - 108,762,789)(108,586,971 - 108,588,021)
sequence
gaattcatttctcctggctcccagcccgggctccccacacctcctcacct
tctttcttcataattggactttggccagcatttgatatttctgtagcctc
tcaagttcccaaactcccatatcctaaatgatctccttcaaagatcccaa
gataccgtctgtgttggggaggaatattgcttttgtttggattttgcggt
gtttgtttagttggttggttttaatgacacaggacttttcccttagggtt
ttcctacctgaaggagctctggttctcctttctgcctctggtatttcaat
tctttcattagttctataaggcgtggacacctaactcaagccaggcagaa
gtaggcattaggaatcccaaggcgagggctggagagatggctcagtgact
aaaagccctggctgatcttccagaggaaccgggtttgactcccaacaccc
acataatggttcacgaccatctgtaactccagcctgagaggatttaatgg
cctctgtagacactgtgtgcatgtggtgcacagacatacatgcgggcaaa
acacccatacatataaaataaacataaatcaaaacaattggaaaaaataa
aatccaagacgcacacatagtaacttctgtctccaccaagctatcagcta
gtggcctaagagtgtatactagagtgtattagttaccacggggattctcg
tcaacaccacagccctagaggaaatctcagggaattttctgggaagcact
gacatccaagtgagtcatatgaaaggataaggttcttagtctgacaaata
tggggggcaaggagagaataccaaacaaatgtgtgggtgtaaggataagg
tttagaattatagtaaggaattatgctggcctatcacacatagtgattga
agattcttcac
gaattctttaggaccacccttcctgggtgaaaagagattgaagagatggc
cacaaagcaaaggtattacacaaggcggtggatacatgactgcaatgcac
tgaatgtacactcgcaaaagaacaacggactctggagaagagcaacataa
agatcatcgaacaccctggacatttagtggatatgtttgtccggggggca
tggaacaagcatacagagaggaacagcagaggcaatttttcctctaatac
acattctaacataaaagggaaggggatcaaatgatagtgggcaacttgaa
atcttatttcatacttgaaattgcatttccaaatggaatatgctttaatt
agacttatggaaatttctagaaacacttcctcaccctacttctgatcttt
ccaggttccaatcatgaaatagttcatttttaggtccttttaaagagcta
actggctcccagagaacttcactttggtacatttcatttatttatttctt
tttctgaactctggcttctgcattccctgtgaagcattgtttacagagac
ggcaaagcaaacacctgtcattcttaaaacacgaggagtataattcagca
ccttttctgtgatcacagaatgcaattaatcctctggctgccttggtatg
tagaccaaaccttctgccacagtgttttgggatgctgccgtctagggtgg
ctctgccaatctcttcattccaacagaaagcctgccaggcttctccgtgc
taagcaaagaataatgaggcagaagagggtgactagggcctcgcagaggg
gatgcgcccctgagactcactttccacaacacaaagctaccttactattc
aagtacttttgttgccctgaacataggaaactcaattaaattaaattcct
ctaagaagaaatactgcctcatctctagctgagaaatgtttaatctgtag
aagttatagcgtagatggaatagtggagaaaataattagactcagaaaat
gttaggagatcagggttagctcaaaaaaaccagcagagaaccatgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108761883_108762789
seq2: B6Ng01-275N20.b_46_956 (reverse)

seq1  GTGAAGAATCTACTATCACTATGT-TGATAGGCCAGCATAATTCCTTACT  49
      ||||||||||| | |||||||||| |||||||||||||||||||||||||
seq2  GTGAAGAATCTTCAATCACTATGTGTGATAGGCCAGCATAATTCCTTACT  50

seq1  AT-ATTCTAAACCTTATCCTTACACCCACACATTTGTTT-GTATTCTCTC  97
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAATTCTAAACCTTATCCTTACACCCACACATTTGTTTGGTATTCTCTC  100

seq1  CTTGCCCCCCATATTTGTCAGACTAAG-ACCTTATCCTTTCATATGACTC  146
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTGCCCCCCATATTTGTCAGACTAAGAACCTTATCCTTTCATATGACTC  150

seq1  ACTTGGATGTCAGTGCTTCCCAGAAAATTCCCTGAGATTTCCTCTAGGGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATGTCAGTGCTTCCCAGAAAATTCCCTGAGATTTCCTCTAGGGC  200

seq1  TGTGGTGTTGACGAGAATCCCCGTGGTAACTAATACACTCTAGTATACAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTTGACGAGAATCCCCGTGGTAACTAATACACTCTAGTATACAC  250

seq1  TCTTAGGCCACTAGCTGATAGCTTGGTGGAGACAGAAGTTACTATGTGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGCCACTAGCTGATAGCTTGGTGGAGACAGAAGTTACTATGTGTG  300

seq1  CGTCTTGGATTTTATTTTTTCCAATTGTTTTGATTTATGTTTATTTTATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTGGATTTTATTTTTTCCAATTGTTTTGATTTATGTTTATTTTATA  350

seq1  TGTATGGGTGTTTTGCCCGCATGTATGTCTGTGCACCACATGCACACAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGGTGTTTTGCCCGCATGTATGTCTGTGCACCACATGCACACAGT  400

seq1  GTCTACAGAGGCCATTAAATCCTCTCAGGCTGGAGTTACAGATGGTCGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGAGGCCATTAAATCCTCTCAGGCTGGAGTTACAGATGGTCGTG  450

seq1  AACCATTATGTGGGTGTTGGGAGTCAAACCCGGTTCCTCTGGAAGATCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTATGTGGGTGTTGGGAGTCAAACCCGGTTCCTCTGGAAGATCAG  500

seq1  CCAGGGCTTTTAGTCACTGAGCCATCTCTCCAGCCCTCGCCTTGGGATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTTTTAGTCACTGAGCCATCTCTCCAGCCCTCGCCTTGGGATTC  550

seq1  CTAATGCCTACTTCTGCCTGGCTTGAGTTAGGTGTCCACGCCTTATAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCCTACTTCTGCCTGGCTTGAGTTAGGTGTCCACGCCTTATAGAA  600

seq1  CTAATGAAAGAATTGAAATACCAGAGGCAGAAAGGAGAACCAGAGCTCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAAGAATTGAAATACCAGAGGCAGAAAGGAGAACCAGAGCTCCT  650

seq1  TCAGGTAGGAAAACCCTAAGGGAAAAGTCCTGTGTCATTAAAACCAACCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGGAAAACCCTAAGGGAAAAGTCCTGTGTCATTAAAACCAACCA  700

seq1  ACTAAACAAACACCGCAAAATCCAAACAAAAGCAATATTCCTCCCCAACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAAACACCGCAAAATCCAAACAAAAGCAATATTCCTCCCCAACA  750

seq1  CAGACGGTATCTTGGGATCTTTGAAGGAGATCATTTAGGATATGGGAGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGGTATCTTGGGATCTTTGAAGGAGATCATTTAGGATATGGGAGTT  800

seq1  TGGGAACTTGAGAGGCTACAGAAATATCAAATGCTGGCCAAAGTCCAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTTGAGAGGCTACAGAAATATCAAATGCTGGCCAAAGTCCAATT  850

seq1  ATGAAGAAAGAAGGTGAGGAGGTGTGGGGAGCCCGGGCTGGGAGCCAGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAGAAGGTGAGGAGGTGTGGGGAGCCCGGGCTGGGAGCCAGGA  900

seq1  GAAATGAATTC  907
      |||||||||||
seq2  GAAATGAATTC  911

seq1: chr1_108586971_108588021
seq2: B6Ng01-275N20.g_66_1114

seq1  GAATTCTTTAGGACCACCCTTCCTGGGTGAAAAGAGATTGAAGAGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGGACCACCCTTCCTGGGTGAAAAGAGATTGAAGAGATGGC  50

seq1  CACAAAGCAAAGGTATTACACAAGGCGGTGGATACATGACTGCAATGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCAAAGGTATTACACAAGGCGGTGGATACATGACTGCAATGCAC  100

seq1  TGAATGTACACTCGCAAAAGAACAACGGACTCTGGAGAAGAGCAACATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTACACTCGCAAAAGAACAACGGACTCTGGAGAAGAGCAACATAA  150

seq1  AGATCATCGAACACCCTGGACATTTAGTGGATATGTTTGTCCGGGGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATCGAACACCCTGGACATTTAGTGGATATGTTTGTCCGGGGGGCA  200

seq1  TGGAACAAGCATACAGAGAGGAACAGCAGAGGCAATTTTTCCTCTAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAGCATACAGAGAGGAACAGCAGAGGCAATTTTTCCTCTAATAC  250

seq1  ACATTCTAACATAAAAGGGAAGGGGATCAAATGATAGTGGGCAACTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTAACATAAAAGGGAAGGGGATCAAATGATAGTGGGCAACTTGAA  300

seq1  ATCTTATTTCATACTTGAAATTGCATTTCCAAATGGAATATGCTTTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTTCATACTTGAAATTGCATTTCCAAATGGAATATGCTTTAATT  350

seq1  AGACTTATGGAAATTTCTAGAAACACTTCCTCACCCTACTTCTGATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATGGAAATTTCTAGAAACACTTCCTCACCCTACTTCTGATCTTT  400

seq1  CCAGGTTCCAATCATGAAATAGTTCATTTTTAGGTCCTTTTAAAGAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCCAATCATGAAATAGTTCATTTTTAGGTCCTTTTAAAGAGCTA  450

seq1  ACTGGCTCCCAGAGAACTTCACTTTGGTACATTTCATTTATTTATTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTCCCAGAGAACTTCACTTTGGTACATTTCATTTATTTATTTCTT  500

seq1  TTTCTGAACTCTGGCTTCTGCATTCCCTGTGAAGCATTGTTTACAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAACTCTGGCTTCTGCATTCCCTGTGAAGCATTGTTTACAGAGAC  550

seq1  GGCAAAGCAAACACCTGTCATTCTTAAAACACGAGGAGTATAATTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCAAACACCTGTCATTCTTAAAACACGAGGAGTATAATTCAGCA  600

seq1  CCTTTTCTGTGATCACAGAATGCAATTAATCCTCTGGCTGCCTTGGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTGTGATCACAGAATGCAATTAATCCTCTGGCTGCCTTGGTATG  650

seq1  TAGACCAAACCTTCTGCCACAGTGTTTTGGGATGCTGCCGTCTAGGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAACCTTCTGCCACAGTGTTTTGGGATGCTGCCGTCTAGGGTGG  700

seq1  CTCTGCCAATCTCTTCATTCCAACAGAAAGCCTGCCAGGCTTCTCCGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCAATCTCTTCATTCCAACAGAAAGCCTGCCAGGCTTCTCCGTGC  750

seq1  TAAGCAAAGAATAATGAGGCAGAAGAGGGTGACTAGGGCCTCGCAGAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAAGAATAATGAGGCAGAAGAGGGTGACTAGGGCCTCGCAGAGGG  800

seq1  GATGCGCCCCTGAGACTCACTTTCCACAACACAAAGCTACCTTACTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGCCCCTGAGACTCACTTTCCACAACACAAAGCTACCTTACTATTC  850

seq1  AAGTACTTTTGTTGCCCTGAACATAGGAAACTCAATTAAATTAAAATTCC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGTACTTTTGTTGCCCTGAACATAGGAAACTCAATTAAATT-AAATTCC  899

seq1  TCTAAGAAGAAATACTGCCTCATCTCTAGCTGAGAAATGTTTTAATCTGT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTAAGAAGAAATACTGCCTCATCTCTAGCTGAGAAATG-TTTAATCTGT  948

seq1  AGAAG-TATAGCGTAGATGGAATAGTGGGAGAAATAATTAGAACTCAGAA  999
      ||||| ||||||||||||||||||||||   |||||||||| ||||||||
seq2  AGAAGTTATAGCGTAGATGGAATAGTGGAGAAAATAATTAG-ACTCAGAA  997

seq1  AATGTTAGGAGATCAGGGTAAGCTCAAAAAAACAAGCAGAGAACCATGCT  1049
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  AATGTTAGGAGATCAGGGTTAGCTCAAAAAAACCAGCAGAGAACCATGCT  1047

seq1  TT  1051
      ||
seq2  TT  1049